RNA–Protein interactions for RNA: ENST00000574980.5

HCFC1R1-207, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 5 BASIC

Gene HCFC1R1, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-207ENST00000574980 KCNQ2O43526 872 aa29.03■■■□□ 2.24
HCFC1R1-207ENST00000574980 NSD2O96028 1365 aa29.02■■■□□ 2.24
HCFC1R1-207ENST00000574980 PLSCR1O15162 318 aa29.02■■■□□ 2.24
HCFC1R1-207ENST00000574980 RAPGEF4Q8WZA2 1011 aa29.01■■■□□ 2.23
HCFC1R1-207ENST00000574980 LRP5O75197 1615 aa29.01■■■□□ 2.23
HCFC1R1-207ENST00000574980 ZCRB1Q8TBF4 217 aaKnown RBP29■■■□□ 2.23
HCFC1R1-207ENST00000574980 POLKQ9UBT6 870 aa29■■■□□ 2.23
HCFC1R1-207ENST00000574980 NBPF14Q5TI25 921 aa28.99■■■□□ 2.23
HCFC1R1-207ENST00000574980 KNSTRNQ9Y448 316 aa28.99■■■□□ 2.23
HCFC1R1-207ENST00000574980 WASHC2AQ641Q2 1341 aa28.97■■■□□ 2.23
HCFC1R1-207ENST00000574980 TATP17735 454 aaPredicted RBP28.96■■■□□ 2.23
HCFC1R1-207ENST00000574980 MORC1Q86VD1 984 aa28.94■■■□□ 2.22
HCFC1R1-207ENST00000574980 PKD1L3Q7Z443 1732 aa28.94■■■□□ 2.22
HCFC1R1-207ENST00000574980 TXNRD1Q16881 649 aa28.92■■■□□ 2.22
HCFC1R1-207ENST00000574980 SYTL4Q96C24 671 aaPredicted RBP28.92■■■□□ 2.22
HCFC1R1-207ENST00000574980 NCAPD2Q15021 1401 aa28.91■■■□□ 2.22
HCFC1R1-207ENST00000574980 PROM2Q8N271 834 aa28.9■■■□□ 2.22
HCFC1R1-207ENST00000574980 EYA1Q99502 592 aa28.89■■■□□ 2.22
HCFC1R1-207ENST00000574980 ANO8Q9HCE9 1232 aaPredicted RBP28.89■■■□□ 2.22
HCFC1R1-207ENST00000574980 PCDH11XQ9BZA7 1347 aa28.89■■■□□ 2.21
HCFC1R1-207ENST00000574980 PCDH11YQ9BZA8 1340 aa28.89■■■□□ 2.21
HCFC1R1-207ENST00000574980 EIF4A2Q14240 407 aaKnown RBP28.88■■■□□ 2.21
HCFC1R1-207ENST00000574980 PRIM1P49642 420 aaKnown RBP28.86■■■□□ 2.21
HCFC1R1-207ENST00000574980 AMER1Q5JTC6 1135 aaPredicted RBP28.86■■■□□ 2.21
HCFC1R1-207ENST00000574980 TOGARAM1Q9Y4F4 1720 aa28.84■■■□□ 2.21
HCFC1R1-207ENST00000574980 PAPPAQ13219 1627 aa28.83■■■□□ 2.21
HCFC1R1-207ENST00000574980 LY75O60449 1722 aa28.83■■■□□ 2.21
HCFC1R1-207ENST00000574980 CASZ1Q86V15 1759 aa28.83■■■□□ 2.21
HCFC1R1-207ENST00000574980 ITGB4P16144 1822 aa28.82■■■□□ 2.2
HCFC1R1-207ENST00000574980 CC2D1BQ5T0F9 858 aaKnown RBP28.81■■■□□ 2.2
HCFC1R1-207ENST00000574980 STK32BQ9NY57 414 aa28.81■■■□□ 2.2
HCFC1R1-207ENST00000574980 CYP27B1O15528 508 aa28.79■■■□□ 2.2
HCFC1R1-207ENST00000574980 CNGB1Q14028 1251 aaPredicted RBP28.79■■■□□ 2.2
HCFC1R1-207ENST00000574980 SPG7Q9UQ90 795 aa28.79■■■□□ 2.2
HCFC1R1-207ENST00000574980 PER1O15534 1290 aaPredicted RBP28.78■■■□□ 2.2
HCFC1R1-207ENST00000574980 IGSF1Q8N6C5 1336 aa28.77■■■□□ 2.2
HCFC1R1-207ENST00000574980 SLC15A2Q16348 729 aa28.75■■■□□ 2.19
HCFC1R1-207ENST00000574980 LRRC4BQ9NT99 713 aa28.75■■■□□ 2.19
HCFC1R1-207ENST00000574980 SLC27A3Q5K4L6 730 aa28.72■■■□□ 2.19
HCFC1R1-207ENST00000574980 PDGFDQ9GZP0 370 aaPredicted RBP28.72■■■□□ 2.19
HCFC1R1-207ENST00000574980 KCNQ4P56696 695 aa28.71■■■□□ 2.19
HCFC1R1-207ENST00000574980 MPRIPQ6WCQ1 1025 aa28.71■■■□□ 2.19
HCFC1R1-207ENST00000574980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.71■■■□□ 2.19
HCFC1R1-207ENST00000574980 TUBGCP6Q96RT7 1819 aa28.71■■■□□ 2.19
HCFC1R1-207ENST00000574980 MTHFSP49914 203 aa28.7■■■□□ 2.18
HCFC1R1-207ENST00000574980 SPON1Q9HCB6 807 aa28.7■■■□□ 2.18
HCFC1R1-207ENST00000574980 ZNF827Q17R98 1081 aa28.69■■■□□ 2.18
HCFC1R1-207ENST00000574980 C5P01031 1676 aa28.68■■■□□ 2.18
HCFC1R1-207ENST00000574980 PLEKHG2Q9H7P9 1386 aa28.68■■■□□ 2.18
HCFC1R1-207ENST00000574980 NPC1L1Q9UHC9 1359 aa28.68■■■□□ 2.18
HCFC1R1-207ENST00000574980 AEBP1Q8IUX7 1158 aa28.68■■■□□ 2.18
HCFC1R1-207ENST00000574980 IFNL2Q8IZJ0 200 aa28.68■■■□□ 2.18
HCFC1R1-207ENST00000574980 QSER1Q2KHR3 1735 aa28.68■■■□□ 2.18
HCFC1R1-207ENST00000574980 ZBTB7AO95365 584 aa28.67■■■□□ 2.18
HCFC1R1-207ENST00000574980 PHKG2P15735 406 aa28.67■■■□□ 2.18
HCFC1R1-207ENST00000574980 CCNL1Q9UK58 526 aaPredicted RBP28.67■■■□□ 2.18
HCFC1R1-207ENST00000574980 IL13P35225 146 aa28.66■■■□□ 2.18
HCFC1R1-207ENST00000574980 NKX1-1Q15270 411 aaPredicted RBP28.66■■■□□ 2.18
HCFC1R1-207ENST00000574980 PALLDQ8WX93 1383 aa28.65■■■□□ 2.18
HCFC1R1-207ENST00000574980 TAF1LQ8IZX4 1826 aa28.65■■■□□ 2.18
HCFC1R1-207ENST00000574980 SULT6B1Q6IMI4 303 aa28.65■■■□□ 2.18
HCFC1R1-207ENST00000574980 PPP1R1BQ9UD71 204 aaPredicted RBP28.65■■■□□ 2.18
HCFC1R1-207ENST00000574980 PLEKHO1Q53GL0 409 aaPredicted RBP28.63■■■□□ 2.17
HCFC1R1-207ENST00000574980 AKT1S1Q96B36 256 aa28.62■■■□□ 2.17
HCFC1R1-207ENST00000574980 ZNF530Q6P9A1 599 aaPredicted RBP28.61■■■□□ 2.17
HCFC1R1-207ENST00000574980 PIGBQ92521 554 aa28.61■■■□□ 2.17
HCFC1R1-207ENST00000574980 TMOD3Q9NYL9 352 aa28.61■■■□□ 2.17
HCFC1R1-207ENST00000574980 ATF5Q9Y2D1 282 aaPredicted RBP28.61■■■□□ 2.17
HCFC1R1-207ENST00000574980 KDRP35968 1356 aa28.61■■■□□ 2.17
HCFC1R1-207ENST00000574980 AMOTQ4VCS5 1084 aa28.59■■■□□ 2.17
HCFC1R1-207ENST00000574980 TFCP2L1Q9NZI6 479 aa28.59■■■□□ 2.17
HCFC1R1-207ENST00000574980 DIAPH1O60610 1272 aaKnown RBP28.58■■■□□ 2.17
HCFC1R1-207ENST00000574980 SMARCC1Q92922 1105 aaPredicted RBP28.58■■■□□ 2.17
HCFC1R1-207ENST00000574980 COL3A1P02461 1466 aaPredicted RBP28.57■■■□□ 2.16
HCFC1R1-207ENST00000574980 HMOX1P09601 288 aa28.56■■■□□ 2.16
HCFC1R1-207ENST00000574980 C1orf141Q5JVX7 400 aa28.56■■■□□ 2.16
HCFC1R1-207ENST00000574980 VIRMAQ69YN4 1812 aaKnown RBP28.56■■■□□ 2.16
HCFC1R1-207ENST00000574980 MTFR1LQ9H019 292 aa28.56■■■□□ 2.16
HCFC1R1-207ENST00000574980 KDM6AO15550 1401 aaPredicted RBP28.55■■■□□ 2.16
HCFC1R1-207ENST00000574980 HSP90AB1P08238 724 aaKnown RBP28.55■■■□□ 2.16
HCFC1R1-207ENST00000574980 C4BP0C0L5 1744 aa28.55■■■□□ 2.16
HCFC1R1-207ENST00000574980 PNPLA7Q6ZV29 1317 aa28.54■■■□□ 2.16
HCFC1R1-207ENST00000574980 SCN11AQ9UI33 1791 aa28.53■■■□□ 2.16
HCFC1R1-207ENST00000574980 DCAF5Q96JK2 942 aa28.53■■■□□ 2.16
HCFC1R1-207ENST00000574980 PTGER2P43116 358 aa28.52■■■□□ 2.16
HCFC1R1-207ENST00000574980 ASAP1Q9ULH1 1129 aa28.51■■■□□ 2.15
HCFC1R1-207ENST00000574980 ERVV-2B6SEH9 535 aa28.49■■■□□ 2.15
HCFC1R1-207ENST00000574980 U2SURPO15042 1029 aaKnown RBP28.49■■■□□ 2.15
HCFC1R1-207ENST00000574980 LOC102724428A0A0B4J2F2 783 aa28.48■■■□□ 2.15
HCFC1R1-207ENST00000574980 MSH5O43196 834 aa28.48■■■□□ 2.15
HCFC1R1-207ENST00000574980 SIK1P57059 783 aa28.48■■■□□ 2.15
HCFC1R1-207ENST00000574980 UBR3Q6ZT12 1888 aa28.47■■■□□ 2.15
HCFC1R1-207ENST00000574980 CABP4P57796 275 aa28.47■■■□□ 2.15
HCFC1R1-207ENST00000574980 ATG3Q9NT62 314 aa28.47■■■□□ 2.15
HCFC1R1-207ENST00000574980 HMGB2P26583 209 aaKnown RBP28.46■■■□□ 2.15
HCFC1R1-207ENST00000574980 CFAP53Q96M91 514 aa28.46■■■□□ 2.15
HCFC1R1-207ENST00000574980 COL24A1Q17RW2 1714 aa28.46■■■□□ 2.15
HCFC1R1-207ENST00000574980 SLC16A10Q8TF71 515 aa28.45■■■□□ 2.14
HCFC1R1-207ENST00000574980 AK7Q96M32 723 aa28.45■■■□□ 2.14
HCFC1R1-207ENST00000574980 SGIP1Q9BQI5 828 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms