RNA–Protein interactions for RNA: ENST00000574909.1

RNF213-219, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-219ENST00000574909 ERBB3P21860 1342 aa10.57□□□□□ -0.72
RNF213-219ENST00000574909 PIK3C2AO00443 1686 aa10.57□□□□□ -0.72
RNF213-219ENST00000574909 SOX12O15370 315 aa10.56□□□□□ -0.72
RNF213-219ENST00000574909 PRKRIP1Q9H875 184 aaPredicted RBP10.55□□□□□ -0.72
RNF213-219ENST00000574909 LRRC4BQ9NT99 713 aa10.55□□□□□ -0.72
RNF213-219ENST00000574909 USP31Q70CQ4 1352 aa10.54□□□□□ -0.72
RNF213-219ENST00000574909 KTN1Q86UP2 1357 aaKnown RBP10.54□□□□□ -0.72
RNF213-219ENST00000574909 NFAT5O94916 1531 aa10.54□□□□□ -0.72
RNF213-219ENST00000574909 HSPA5P11021 654 aaKnown RBP10.54□□□□□ -0.72
RNF213-219ENST00000574909 PNPLA7Q6ZV29 1317 aa10.54□□□□□ -0.72
RNF213-219ENST00000574909 GPBP1L1Q9HC44 474 aaPredicted RBP10.53□□□□□ -0.72
RNF213-219ENST00000574909 HSPA6P17066 643 aa10.52□□□□□ -0.73
RNF213-219ENST00000574909 NLGN2Q8NFZ4 835 aa10.52□□□□□ -0.73
RNF213-219ENST00000574909 ANKRD24Q8TF21 1146 aa10.52□□□□□ -0.73
RNF213-219ENST00000574909 NOP58Q9Y2X3 529 aaKnown RBP10.52□□□□□ -0.73
RNF213-219ENST00000574909 CD2APQ9Y5K6 639 aa10.52□□□□□ -0.73
RNF213-219ENST00000574909 QSER1Q2KHR3 1735 aa10.52□□□□□ -0.73
RNF213-219ENST00000574909 SHANK3Q9BYB0 1731 aa10.51□□□□□ -0.73
RNF213-219ENST00000574909 FLAD1Q8NFF5 587 aa10.51□□□□□ -0.73
RNF213-219ENST00000574909 ROCK2O75116 1388 aaKnown RBP10.51□□□□□ -0.73
RNF213-219ENST00000574909 ANKRD36BQ8N2N9 1353 aa10.51□□□□□ -0.73
RNF213-219ENST00000574909 ATP10DQ9P241 1426 aa10.5□□□□□ -0.73
RNF213-219ENST00000574909 COL24A1Q17RW2 1714 aa10.5□□□□□ -0.73
RNF213-219ENST00000574909 BTAF1O14981 1849 aa10.5□□□□□ -0.73
RNF213-219ENST00000574909 YBX3P16989 372 aaKnown RBP eCLIP10.5□□□□□ -0.73
RNF213-219ENST00000574909 DDX54Q8TDD1 881 aaKnown RBP10.5□□□□□ -0.73
RNF213-219ENST00000574909 SYTL4Q96C24 671 aaPredicted RBP10.5□□□□□ -0.73
RNF213-219ENST00000574909 PRIM1P49642 420 aaKnown RBP10.49□□□□□ -0.73
RNF213-219ENST00000574909 HDGFL2Q7Z4V5 671 aaPredicted RBP10.49□□□□□ -0.73
RNF213-219ENST00000574909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.49□□□□□ -0.73
RNF213-219ENST00000574909 CCNL1Q9UK58 526 aaPredicted RBP10.49□□□□□ -0.73
RNF213-219ENST00000574909 INSRP06213 1382 aa10.49□□□□□ -0.73
RNF213-219ENST00000574909 RGPD5Q99666 1765 aa10.49□□□□□ -0.73
RNF213-219ENST00000574909 DEKP35659 375 aaKnown RBP10.48□□□□□ -0.73
RNF213-219ENST00000574909 IP6K1Q92551 441 aa10.48□□□□□ -0.73
RNF213-219ENST00000574909 USP47Q96K76 1375 aa10.48□□□□□ -0.73
RNF213-219ENST00000574909 TERF2IPQ9NYB0 399 aa10.47□□□□□ -0.73
RNF213-219ENST00000574909 CGNL1Q0VF96 1302 aa10.47□□□□□ -0.73
RNF213-219ENST00000574909 NME9Q86XW9 330 aa10.46□□□□□ -0.73
RNF213-219ENST00000574909 COL23A1Q86Y22 540 aaPredicted RBP10.46□□□□□ -0.73
RNF213-219ENST00000574909 ZCRB1Q8TBF4 217 aaKnown RBP10.46□□□□□ -0.73
RNF213-219ENST00000574909 NUDCQ9Y266 331 aa10.46□□□□□ -0.73
RNF213-219ENST00000574909 ADCY9O60503 1353 aa10.46□□□□□ -0.74
RNF213-219ENST00000574909 SBNO2Q9Y2G9 1366 aa10.46□□□□□ -0.74
RNF213-219ENST00000574909 USP54Q70EL1 1684 aa10.46□□□□□ -0.74
RNF213-219ENST00000574909 EDC4Q6P2E9 1401 aaKnown RBP10.45□□□□□ -0.74
RNF213-219ENST00000574909 ANP32AP39687 249 aaKnown RBP10.45□□□□□ -0.74
RNF213-219ENST00000574909 APLP1P51693 650 aa10.45□□□□□ -0.74
RNF213-219ENST00000574909 L3MBTL2Q969R5 705 aa10.45□□□□□ -0.74
RNF213-219ENST00000574909 IPO9Q96P70 1041 aaKnown RBP10.45□□□□□ -0.74
RNF213-219ENST00000574909 MRS2Q9HD23 443 aa10.45□□□□□ -0.74
RNF213-219ENST00000574909 TMC1Q8TDI8 760 aa10.44□□□□□ -0.74
RNF213-219ENST00000574909 PUS7Q96PZ0 661 aaKnown RBP10.44□□□□□ -0.74
RNF213-219ENST00000574909 MON2Q7Z3U7 1717 aa10.44□□□□□ -0.74
RNF213-219ENST00000574909 FAM208AQ9UK61 1670 aaKnown RBP10.44□□□□□ -0.74
RNF213-219ENST00000574909 NSD3Q9BZ95 1437 aa10.43□□□□□ -0.74
RNF213-219ENST00000574909 NSD2O96028 1365 aa10.43□□□□□ -0.74
RNF213-219ENST00000574909 KIF7Q2M1P5 1343 aa10.43□□□□□ -0.74
RNF213-219ENST00000574909 KCNQ4P56696 695 aa10.43□□□□□ -0.74
RNF213-219ENST00000574909 SLC24A1O60721 1099 aa10.42□□□□□ -0.74
RNF213-219ENST00000574909 AMPHP49418 695 aa10.42□□□□□ -0.74
RNF213-219ENST00000574909 MSL1Q68DK7 614 aa10.42□□□□□ -0.74
RNF213-219ENST00000574909 ZNF526Q8TF50 670 aaPredicted RBP10.42□□□□□ -0.74
RNF213-219ENST00000574909 LTV1Q96GA3 475 aaPredicted RBP10.42□□□□□ -0.74
RNF213-219ENST00000574909 LTN1O94822 1766 aa10.42□□□□□ -0.74
RNF213-219ENST00000574909 KAT6BQ8WYB5 2073 aa10.42□□□□□ -0.74
RNF213-219ENST00000574909 LY75O60449 1722 aa10.41□□□□□ -0.74
RNF213-219ENST00000574909 RAPGEF4Q8WZA2 1011 aa10.41□□□□□ -0.74
RNF213-219ENST00000574909 SMARCC1Q92922 1105 aaPredicted RBP10.41□□□□□ -0.74
RNF213-219ENST00000574909 COG3Q96JB2 828 aa10.41□□□□□ -0.74
RNF213-219ENST00000574909 CD163L1Q9NR16 1453 aa10.41□□□□□ -0.74
RNF213-219ENST00000574909 IGSF1Q8N6C5 1336 aa10.4□□□□□ -0.74
RNF213-219ENST00000574909 KIF3CO14782 793 aa10.4□□□□□ -0.74
RNF213-219ENST00000574909 TOMM70O94826 608 aa10.4□□□□□ -0.74
RNF213-219ENST00000574909 MS4A1P11836 297 aa10.4□□□□□ -0.74
RNF213-219ENST00000574909 HOXC9P31274 260 aa10.4□□□□□ -0.74
RNF213-219ENST00000574909 AK7Q96M32 723 aa10.4□□□□□ -0.74
RNF213-219ENST00000574909 SLC12A5Q9H2X9 1139 aa10.4□□□□□ -0.74
RNF213-219ENST00000574909 RTL1A6NKG5 1358 aa10.39□□□□□ -0.75
RNF213-219ENST00000574909 TCERG1O14776 1098 aaKnown RBP10.39□□□□□ -0.75
RNF213-219ENST00000574909 TATP17735 454 aaPredicted RBP10.39□□□□□ -0.75
RNF213-219ENST00000574909 IRX6P78412 446 aaPredicted RBP10.39□□□□□ -0.75
RNF213-219ENST00000574909 RTL5Q5HYW3 569 aaPredicted RBP10.39□□□□□ -0.75
RNF213-219ENST00000574909 B4GALNT3Q6L9W6 998 aa10.39□□□□□ -0.75
RNF213-219ENST00000574909 A0A1W2PP64 1363 aa10.39□□□□□ -0.75
RNF213-219ENST00000574909 PALLDQ8WX93 1383 aa10.39□□□□□ -0.75
RNF213-219ENST00000574909 DOT1LQ8TEK3 1739 aa10.38□□□□□ -0.75
RNF213-219ENST00000574909 MAP3K19Q56UN5 1328 aa10.38□□□□□ -0.75
RNF213-219ENST00000574909 PCDH11XQ9BZA7 1347 aa10.38□□□□□ -0.75
RNF213-219ENST00000574909 PCDH11YQ9BZA8 1340 aa10.38□□□□□ -0.75
RNF213-219ENST00000574909 TUBGCP6Q96RT7 1819 aa10.38□□□□□ -0.75
RNF213-219ENST00000574909 SSFA2P28290 1259 aa10.38□□□□□ -0.75
RNF213-219ENST00000574909 CCDC184Q52MB2 194 aa10.38□□□□□ -0.75
RNF213-219ENST00000574909 CCDC136Q96JN2 1154 aa10.37□□□□□ -0.75
RNF213-219ENST00000574909 CARD11Q9BXL7 1154 aa10.37□□□□□ -0.75
RNF213-219ENST00000574909 ZBTB47Q9UFB7 747 aaPredicted RBP10.37□□□□□ -0.75
RNF213-219ENST00000574909 MEGF6O75095 1541 aa10.37□□□□□ -0.75
RNF213-219ENST00000574909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.36□□□□□ -0.75
RNF213-219ENST00000574909 TGFB2P61812 414 aa10.36□□□□□ -0.75
RNF213-219ENST00000574909 MPRIPQ6WCQ1 1025 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms