RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 DEPDC5O75140 1603 aa17.52■□□□□ 0.4
SMG6-215ENST00000574501 ADCY5O95622 1261 aa17.52■□□□□ 0.4
SMG6-215ENST00000574501 SYAP1Q96A49 352 aaPredicted RBP17.52■□□□□ 0.4
SMG6-215ENST00000574501 REREQ9P2R6 1566 aa17.52■□□□□ 0.4
SMG6-215ENST00000574501 A0A1W2PP64 1363 aa17.52■□□□□ 0.4
SMG6-215ENST00000574501 REC8O95072 547 aa17.52■□□□□ 0.4
SMG6-215ENST00000574501 ZFYVE16Q7Z3T8 1539 aa17.52■□□□□ 0.39
SMG6-215ENST00000574501 FBLN1P23142 703 aa17.51■□□□□ 0.39
SMG6-215ENST00000574501 NEURL4Q96JN8 1562 aa17.51■□□□□ 0.39
SMG6-215ENST00000574501 FYB1O15117 783 aa17.51■□□□□ 0.39
SMG6-215ENST00000574501 PHACTR3Q96KR7 559 aa17.51■□□□□ 0.39
SMG6-215ENST00000574501 SETBP1Q9Y6X0 1596 aa17.51■□□□□ 0.39
SMG6-215ENST00000574501 PLCB2Q00722 1185 aa17.5■□□□□ 0.39
SMG6-215ENST00000574501 ERC2O15083 957 aa17.5■□□□□ 0.39
SMG6-215ENST00000574501 HMOX1P09601 288 aa17.5■□□□□ 0.39
SMG6-215ENST00000574501 FKBP5Q13451 457 aaPredicted RBP17.5■□□□□ 0.39
SMG6-215ENST00000574501 TWISTNBQ3B726 338 aaPredicted RBP17.5■□□□□ 0.39
SMG6-215ENST00000574501 USP48Q86UV5 1035 aa17.5■□□□□ 0.39
SMG6-215ENST00000574501 PDCL2Q8N4E4 241 aa17.5■□□□□ 0.39
SMG6-215ENST00000574501 MBIPQ9NS73 344 aa17.5■□□□□ 0.39
SMG6-215ENST00000574501 KIF20AO95235 890 aa17.49■□□□□ 0.39
SMG6-215ENST00000574501 SRPK2P78362 688 aaKnown RBP17.49■□□□□ 0.39
SMG6-215ENST00000574501 C8orf58Q8NAV2 365 aa17.49■□□□□ 0.39
SMG6-215ENST00000574501 KNDC1Q76NI1 1749 aa17.49■□□□□ 0.39
SMG6-215ENST00000574501 TULP4Q9NRJ4 1543 aa17.49■□□□□ 0.39
SMG6-215ENST00000574501 ADGRB1O14514 1584 aa17.49■□□□□ 0.39
SMG6-215ENST00000574501 PHF14O94880 888 aa17.49■□□□□ 0.39
SMG6-215ENST00000574501 HCLS1P14317 486 aaPredicted RBP17.49■□□□□ 0.39
SMG6-215ENST00000574501 U2AF2P26368 475 aaKnown RBP eCLIP17.49■□□□□ 0.39
SMG6-215ENST00000574501 FCHSD2O94868 740 aa17.48■□□□□ 0.39
SMG6-215ENST00000574501 LETM1O95202 739 aaPredicted RBP17.48■□□□□ 0.39
SMG6-215ENST00000574501 VWDEQ8N2E2 1590 aa17.48■□□□□ 0.39
SMG6-215ENST00000574501 API5Q9BZZ5 524 aaKnown RBP17.47■□□□□ 0.39
SMG6-215ENST00000574501 SPTLC3Q9NUV7 552 aa17.47■□□□□ 0.39
SMG6-215ENST00000574501 RIOK3O14730 519 aaKnown RBP17.46■□□□□ 0.39
SMG6-215ENST00000574501 UVSSAQ2YD98 709 aa17.46■□□□□ 0.39
SMG6-215ENST00000574501 ANKRD44Q8N8A2 993 aa17.46■□□□□ 0.39
SMG6-215ENST00000574501 FAM184AQ8NB25 1140 aa17.46■□□□□ 0.39
SMG6-215ENST00000574501 PALD1Q9ULE6 856 aa17.46■□□□□ 0.38
SMG6-215ENST00000574501 LRRC7Q96NW7 1537 aa17.45■□□□□ 0.38
SMG6-215ENST00000574501 GNAI1P63096 354 aa17.45■□□□□ 0.38
SMG6-215ENST00000574501 NFE2L2Q16236 605 aa17.45■□□□□ 0.38
SMG6-215ENST00000574501 CUL4AQ13619 759 aa17.45■□□□□ 0.38
SMG6-215ENST00000574501 TSHZ3Q63HK5 1081 aa17.45■□□□□ 0.38
SMG6-215ENST00000574501 CEP85Q6P2H3 762 aa17.45■□□□□ 0.38
SMG6-215ENST00000574501 BBXQ8WY36 941 aaPredicted RBP17.45■□□□□ 0.38
SMG6-215ENST00000574501 STK26Q9P289 416 aa17.45■□□□□ 0.38
SMG6-215ENST00000574501 PYCARDQ9ULZ3 195 aa17.44■□□□□ 0.38
SMG6-215ENST00000574501 PUS7Q96PZ0 661 aaKnown RBP17.43■□□□□ 0.38
SMG6-215ENST00000574501 IFT57Q9NWB7 429 aa17.43■□□□□ 0.38
SMG6-215ENST00000574501 KRT24Q2M2I5 525 aa17.43■□□□□ 0.38
SMG6-215ENST00000574501 CFAP65Q6ZU64 1925 aaKnown RBP17.43■□□□□ 0.38
SMG6-215ENST00000574501 UPF3BQ9BZI7 483 aaKnown RBP17.42■□□□□ 0.38
SMG6-215ENST00000574501 KCNF1Q9H3M0 494 aa17.42■□□□□ 0.38
SMG6-215ENST00000574501 KDM4AO75164 1064 aa17.42■□□□□ 0.38
SMG6-215ENST00000574501 CCDC183Q5T5S1 534 aa17.42■□□□□ 0.38
SMG6-215ENST00000574501 SPC24Q8NBT2 197 aa17.42■□□□□ 0.38
SMG6-215ENST00000574501 FAM135BQ49AJ0 1406 aa17.42■□□□□ 0.38
SMG6-215ENST00000574501 ATP10DQ9P241 1426 aa17.42■□□□□ 0.38
SMG6-215ENST00000574501 FAM83GA6ND36 823 aa17.41■□□□□ 0.38
SMG6-215ENST00000574501 MCM2P49736 904 aa17.41■□□□□ 0.38
SMG6-215ENST00000574501 CHAF1AQ13111 956 aaPredicted RBP17.41■□□□□ 0.38
SMG6-215ENST00000574501 CNPY2Q9Y2B0 182 aa17.41■□□□□ 0.38
SMG6-215ENST00000574501 ADGRB3O60242 1522 aa17.41■□□□□ 0.38
SMG6-215ENST00000574501 PNPLA6Q8IY17 1366 aa17.41■□□□□ 0.38
SMG6-215ENST00000574501 AP5Z1O43299 807 aa17.41■□□□□ 0.38
SMG6-215ENST00000574501 ZNF853P0CG23 659 aa17.41■□□□□ 0.38
SMG6-215ENST00000574501 KIAA1524Q8TCG1 905 aa17.41■□□□□ 0.38
SMG6-215ENST00000574501 MROH1Q8NDA8 1641 aa17.4■□□□□ 0.38
SMG6-215ENST00000574501 FAM69CQ0P6D2 419 aa17.4■□□□□ 0.38
SMG6-215ENST00000574501 DCTN1Q14203 1278 aa17.4■□□□□ 0.38
SMG6-215ENST00000574501 RPAP2Q8IXW5 612 aaPredicted RBP17.4■□□□□ 0.38
SMG6-215ENST00000574501 ANKRD7Q92527 254 aa17.4■□□□□ 0.38
SMG6-215ENST00000574501 DIAPH3Q9NSV4 1193 aa17.4■□□□□ 0.38
SMG6-215ENST00000574501 ATP7AQ04656 1500 aa17.4■□□□□ 0.38
SMG6-215ENST00000574501 EFCAB6Q5THR3 1501 aa17.4■□□□□ 0.38
SMG6-215ENST00000574501 TCHHQ07283 1943 aa17.4■□□□□ 0.38
SMG6-215ENST00000574501 INTS4Q96HW7 963 aaKnown RBP17.4■□□□□ 0.38
SMG6-215ENST00000574501 SRCIN1Q9C0H9 1055 aa17.4■□□□□ 0.38
SMG6-215ENST00000574501 MX1P20591 662 aa17.39■□□□□ 0.37
SMG6-215ENST00000574501 GTF2E1P29083 439 aaPredicted RBP17.39■□□□□ 0.37
SMG6-215ENST00000574501 MEIS3Q99687 375 aa17.39■□□□□ 0.37
SMG6-215ENST00000574501 ANO2Q9NQ90 1003 aa17.39■□□□□ 0.37
SMG6-215ENST00000574501 TERF2IPQ9NYB0 399 aa17.39■□□□□ 0.37
SMG6-215ENST00000574501 PDE1AP54750 535 aa17.39■□□□□ 0.37
SMG6-215ENST00000574501 GIMAP6Q6P9H5 292 aa17.39■□□□□ 0.37
SMG6-215ENST00000574501 GLI2P10070 1586 aa17.39■□□□□ 0.37
SMG6-215ENST00000574501 ZNF771Q7L3S4 317 aaPredicted RBP17.38■□□□□ 0.37
SMG6-215ENST00000574501 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.38■□□□□ 0.37
SMG6-215ENST00000574501 MINK1Q8N4C8 1332 aaPredicted RBP17.38■□□□□ 0.37
SMG6-215ENST00000574501 WDR33Q9C0J8 1336 aaKnown RBP17.38■□□□□ 0.37
SMG6-215ENST00000574501 ESYT1Q9BSJ8 1104 aa17.38■□□□□ 0.37
SMG6-215ENST00000574501 PPLO60437 1756 aa17.37■□□□□ 0.37
SMG6-215ENST00000574501 CGNQ9P2M7 1197 aaKnown RBP17.37■□□□□ 0.37
SMG6-215ENST00000574501 POLKQ9UBT6 870 aa17.37■□□□□ 0.37
SMG6-215ENST00000574501 MCCP23508 829 aa17.37■□□□□ 0.37
SMG6-215ENST00000574501 RTL1A6NKG5 1358 aa17.37■□□□□ 0.37
SMG6-215ENST00000574501 MSH6P52701 1360 aa17.37■□□□□ 0.37
SMG6-215ENST00000574501 ARHGEF40Q8TER5 1519 aa17.36■□□□□ 0.37
SMG6-215ENST00000574501 FANCAO15360 1455 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms