RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 TATP17735 454 aaPredicted RBP22.64■■□□□ 1.21
TVP23B-207ENST00000574294 PPM1GO15355 546 aaPredicted RBP22.63■■□□□ 1.21
TVP23B-207ENST00000574294 KCNQ2O43526 872 aa22.63■■□□□ 1.21
TVP23B-207ENST00000574294 ACSBG1Q96GR2 724 aa22.63■■□□□ 1.21
TVP23B-207ENST00000574294 MEGF6O75095 1541 aa22.62■■□□□ 1.21
TVP23B-207ENST00000574294 TXNRD1Q16881 649 aa22.62■■□□□ 1.21
TVP23B-207ENST00000574294 KNSTRNQ9Y448 316 aa22.62■■□□□ 1.21
TVP23B-207ENST00000574294 PROM2Q8N271 834 aa22.61■■□□□ 1.21
TVP23B-207ENST00000574294 POLKQ9UBT6 870 aa22.61■■□□□ 1.21
TVP23B-207ENST00000574294 BTAF1O14981 1849 aa22.61■■□□□ 1.21
TVP23B-207ENST00000574294 USHBP1Q8N6Y0 703 aa22.59■■□□□ 1.21
TVP23B-207ENST00000574294 SHANK3Q9BYB0 1731 aa22.59■■□□□ 1.21
TVP23B-207ENST00000574294 PCDH11XQ9BZA7 1347 aa22.58■■□□□ 1.21
TVP23B-207ENST00000574294 PCDH11YQ9BZA8 1340 aa22.58■■□□□ 1.21
TVP23B-207ENST00000574294 NCAPD2Q15021 1401 aa22.58■■□□□ 1.21
TVP23B-207ENST00000574294 KIF7Q2M1P5 1343 aa22.57■■□□□ 1.2
TVP23B-207ENST00000574294 STK32BQ9NY57 414 aa22.57■■□□□ 1.2
TVP23B-207ENST00000574294 PLEKHG2Q9H7P9 1386 aa22.57■■□□□ 1.2
TVP23B-207ENST00000574294 MORC1Q86VD1 984 aa22.56■■□□□ 1.2
TVP23B-207ENST00000574294 HMGB2P26583 209 aaKnown RBP22.55■■□□□ 1.2
TVP23B-207ENST00000574294 TNNT2P45379 298 aaPredicted RBP22.55■■□□□ 1.2
TVP23B-207ENST00000574294 SLC27A3Q5K4L6 730 aa22.55■■□□□ 1.2
TVP23B-207ENST00000574294 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.55■■□□□ 1.2
TVP23B-207ENST00000574294 DOT1LQ8TEK3 1739 aa22.54■■□□□ 1.2
TVP23B-207ENST00000574294 PRIM1P49642 420 aaKnown RBP22.54■■□□□ 1.2
TVP23B-207ENST00000574294 SYTL4Q96C24 671 aaPredicted RBP22.54■■□□□ 1.2
TVP23B-207ENST00000574294 SPON1Q9HCB6 807 aa22.54■■□□□ 1.2
TVP23B-207ENST00000574294 SLC15A2Q16348 729 aa22.53■■□□□ 1.2
TVP23B-207ENST00000574294 PIAS4Q8N2W9 510 aaPredicted RBP22.53■■□□□ 1.2
TVP23B-207ENST00000574294 ANO8Q9HCE9 1232 aaPredicted RBP22.53■■□□□ 1.2
TVP23B-207ENST00000574294 SPG7Q9UQ90 795 aa22.53■■□□□ 1.2
TVP23B-207ENST00000574294 PKD1L3Q7Z443 1732 aa22.52■■□□□ 1.2
TVP23B-207ENST00000574294 EYA1Q99502 592 aa22.52■■□□□ 1.2
TVP23B-207ENST00000574294 EIF4A2Q14240 407 aaKnown RBP22.5■■□□□ 1.19
TVP23B-207ENST00000574294 AMER1Q5JTC6 1135 aaPredicted RBP22.49■■□□□ 1.19
TVP23B-207ENST00000574294 CASZ1Q86V15 1759 aa22.48■■□□□ 1.19
TVP23B-207ENST00000574294 PAPPAQ13219 1627 aa22.47■■□□□ 1.19
TVP23B-207ENST00000574294 CYP27B1O15528 508 aa22.47■■□□□ 1.19
TVP23B-207ENST00000574294 NKX1-1Q15270 411 aaPredicted RBP22.47■■□□□ 1.19
TVP23B-207ENST00000574294 IGSF1Q8N6C5 1336 aa22.47■■□□□ 1.19
TVP23B-207ENST00000574294 LY75O60449 1722 aa22.46■■□□□ 1.19
TVP23B-207ENST00000574294 PER1O15534 1290 aaPredicted RBP22.45■■□□□ 1.18
TVP23B-207ENST00000574294 LRRC4BQ9NT99 713 aa22.44■■□□□ 1.18
TVP23B-207ENST00000574294 PPP1R1BQ9UD71 204 aaPredicted RBP22.44■■□□□ 1.18
TVP23B-207ENST00000574294 NPC1L1Q9UHC9 1359 aa22.43■■□□□ 1.18
TVP23B-207ENST00000574294 IFNL2Q8IZJ0 200 aa22.43■■□□□ 1.18
TVP23B-207ENST00000574294 SMARCC1Q92922 1105 aaPredicted RBP22.43■■□□□ 1.18
TVP23B-207ENST00000574294 QSER1Q2KHR3 1735 aa22.42■■□□□ 1.18
TVP23B-207ENST00000574294 MTFR1LQ9H019 292 aa22.41■■□□□ 1.18
TVP23B-207ENST00000574294 CCNL1Q9UK58 526 aaPredicted RBP22.41■■□□□ 1.18
TVP23B-207ENST00000574294 ITGB4P16144 1822 aa22.41■■□□□ 1.18
TVP23B-207ENST00000574294 AMOTQ4VCS5 1084 aa22.4■■□□□ 1.18
TVP23B-207ENST00000574294 SLC16A10Q8TF71 515 aa22.4■■□□□ 1.18
TVP23B-207ENST00000574294 AKT1S1Q96B36 256 aa22.4■■□□□ 1.18
TVP23B-207ENST00000574294 HSP90AB1P08238 724 aaKnown RBP22.39■■□□□ 1.17
TVP23B-207ENST00000574294 PLEKHO1Q53GL0 409 aaPredicted RBP22.39■■□□□ 1.17
TVP23B-207ENST00000574294 MPRIPQ6WCQ1 1025 aa22.39■■□□□ 1.17
TVP23B-207ENST00000574294 PHKG2P15735 406 aa22.38■■□□□ 1.17
TVP23B-207ENST00000574294 TOGARAM1Q9Y4F4 1720 aa22.37■■□□□ 1.17
TVP23B-207ENST00000574294 ZBTB7AO95365 584 aa22.37■■□□□ 1.17
TVP23B-207ENST00000574294 ZNF827Q17R98 1081 aa22.37■■□□□ 1.17
TVP23B-207ENST00000574294 PDGFDQ9GZP0 370 aaPredicted RBP22.37■■□□□ 1.17
TVP23B-207ENST00000574294 TMOD3Q9NYL9 352 aa22.36■■□□□ 1.17
TVP23B-207ENST00000574294 TFCP2L1Q9NZI6 479 aa22.36■■□□□ 1.17
TVP23B-207ENST00000574294 KDRP35968 1356 aa22.36■■□□□ 1.17
TVP23B-207ENST00000574294 PALLDQ8WX93 1383 aa22.36■■□□□ 1.17
TVP23B-207ENST00000574294 IL13P35225 146 aa22.35■■□□□ 1.17
TVP23B-207ENST00000574294 MTHFSP49914 203 aa22.35■■□□□ 1.17
TVP23B-207ENST00000574294 PTGER2P43116 358 aa22.34■■□□□ 1.17
TVP23B-207ENST00000574294 CC2D1BQ5T0F9 858 aaKnown RBP22.34■■□□□ 1.17
TVP23B-207ENST00000574294 PIGBQ92521 554 aa22.34■■□□□ 1.17
TVP23B-207ENST00000574294 DCAF5Q96JK2 942 aa22.34■■□□□ 1.17
TVP23B-207ENST00000574294 ERVV-2B6SEH9 535 aa22.33■■□□□ 1.17
TVP23B-207ENST00000574294 ATF5Q9Y2D1 282 aaPredicted RBP22.33■■□□□ 1.17
TVP23B-207ENST00000574294 DCAF8L1A6NGE4 600 aa22.32■■□□□ 1.16
TVP23B-207ENST00000574294 SULT6B1Q6IMI4 303 aa22.32■■□□□ 1.16
TVP23B-207ENST00000574294 FLAD1Q8NFF5 587 aa22.32■■□□□ 1.16
TVP23B-207ENST00000574294 C5P01031 1676 aa22.32■■□□□ 1.16
TVP23B-207ENST00000574294 C1orf141Q5JVX7 400 aa22.31■■□□□ 1.16
TVP23B-207ENST00000574294 ZNF530Q6P9A1 599 aaPredicted RBP22.31■■□□□ 1.16
TVP23B-207ENST00000574294 PNPLA7Q6ZV29 1317 aa22.31■■□□□ 1.16
TVP23B-207ENST00000574294 TAF1LQ8IZX4 1826 aa22.3■■□□□ 1.16
TVP23B-207ENST00000574294 KCNQ4P56696 695 aa22.3■■□□□ 1.16
TVP23B-207ENST00000574294 DIAPH1O60610 1272 aaKnown RBP22.29■■□□□ 1.16
TVP23B-207ENST00000574294 SGIP1Q9BQI5 828 aa22.29■■□□□ 1.16
TVP23B-207ENST00000574294 AEBP1Q8IUX7 1158 aa22.28■■□□□ 1.16
TVP23B-207ENST00000574294 TUBGCP6Q96RT7 1819 aa22.28■■□□□ 1.16
TVP23B-207ENST00000574294 POLD1P28340 1107 aa22.27■■□□□ 1.16
TVP23B-207ENST00000574294 LOC102724428A0A0B4J2F2 783 aa22.26■■□□□ 1.15
TVP23B-207ENST00000574294 SIK1P57059 783 aa22.26■■□□□ 1.15
TVP23B-207ENST00000574294 ARXQ96QS3 562 aa22.26■■□□□ 1.15
TVP23B-207ENST00000574294 COL24A1Q17RW2 1714 aa22.26■■□□□ 1.15
TVP23B-207ENST00000574294 C4BP0C0L5 1744 aa22.24■■□□□ 1.15
TVP23B-207ENST00000574294 CABP4P57796 275 aa22.24■■□□□ 1.15
TVP23B-207ENST00000574294 ASAP1Q9ULH1 1129 aa22.24■■□□□ 1.15
TVP23B-207ENST00000574294 MAP3K5Q99683 1374 aa22.24■■□□□ 1.15
TVP23B-207ENST00000574294 ADRA2BP18089 450 aa22.23■■□□□ 1.15
TVP23B-207ENST00000574294 AK7Q96M32 723 aa22.23■■□□□ 1.15
TVP23B-207ENST00000574294 ATG3Q9NT62 314 aa22.23■■□□□ 1.15
TVP23B-207ENST00000574294 ZNF831Q5JPB2 1677 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms