RNA–Protein interactions for RNA: ENST00000573842.1

HCFC1R1-205, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-205ENST00000573842 USHBP1Q8N6Y0 703 aa29.32■■■□□ 2.28
HCFC1R1-205ENST00000573842 DDX54Q8TDD1 881 aaKnown RBP29.32■■■□□ 2.28
HCFC1R1-205ENST00000573842 PKD1L3Q7Z443 1732 aa29.31■■■□□ 2.28
HCFC1R1-205ENST00000573842 KCNQ2O43526 872 aa29.31■■■□□ 2.28
HCFC1R1-205ENST00000573842 RAPGEF4Q8WZA2 1011 aa29.31■■■□□ 2.28
HCFC1R1-205ENST00000573842 ZCRB1Q8TBF4 217 aaKnown RBP29.3■■■□□ 2.28
HCFC1R1-205ENST00000573842 KIF7Q2M1P5 1343 aa29.27■■■□□ 2.28
HCFC1R1-205ENST00000573842 WASHC2AQ641Q2 1341 aa29.27■■■□□ 2.28
HCFC1R1-205ENST00000573842 TATP17735 454 aaPredicted RBP29.27■■■□□ 2.28
HCFC1R1-205ENST00000573842 TNNT2P45379 298 aaPredicted RBP29.26■■■□□ 2.27
HCFC1R1-205ENST00000573842 NCAPD2Q15021 1401 aa29.26■■■□□ 2.27
HCFC1R1-205ENST00000573842 POLKQ9UBT6 870 aa29.25■■■□□ 2.27
HCFC1R1-205ENST00000573842 CASZ1Q86V15 1759 aa29.25■■■□□ 2.27
HCFC1R1-205ENST00000573842 TXNRD1Q16881 649 aa29.24■■■□□ 2.27
HCFC1R1-205ENST00000573842 PAPPAQ13219 1627 aa29.23■■■□□ 2.27
HCFC1R1-205ENST00000573842 KNSTRNQ9Y448 316 aa29.23■■■□□ 2.27
HCFC1R1-205ENST00000573842 PCDH11XQ9BZA7 1347 aa29.22■■■□□ 2.27
HCFC1R1-205ENST00000573842 PCDH11YQ9BZA8 1340 aa29.22■■■□□ 2.27
HCFC1R1-205ENST00000573842 LY75O60449 1722 aa29.22■■■□□ 2.27
HCFC1R1-205ENST00000573842 PROM2Q8N271 834 aa29.21■■■□□ 2.27
HCFC1R1-205ENST00000573842 ANO8Q9HCE9 1232 aaPredicted RBP29.21■■■□□ 2.27
HCFC1R1-205ENST00000573842 SYTL4Q96C24 671 aaPredicted RBP29.19■■■□□ 2.26
HCFC1R1-205ENST00000573842 MORC1Q86VD1 984 aa29.18■■■□□ 2.26
HCFC1R1-205ENST00000573842 ITGB4P16144 1822 aa29.17■■■□□ 2.26
HCFC1R1-205ENST00000573842 TOGARAM1Q9Y4F4 1720 aa29.17■■■□□ 2.26
HCFC1R1-205ENST00000573842 STK32BQ9NY57 414 aa29.17■■■□□ 2.26
HCFC1R1-205ENST00000573842 PRIM1P49642 420 aaKnown RBP29.14■■■□□ 2.26
HCFC1R1-205ENST00000573842 EYA1Q99502 592 aa29.14■■■□□ 2.26
HCFC1R1-205ENST00000573842 QSER1Q2KHR3 1735 aa29.14■■■□□ 2.25
HCFC1R1-205ENST00000573842 EIF4A2Q14240 407 aaKnown RBP29.13■■■□□ 2.25
HCFC1R1-205ENST00000573842 PLEKHG2Q9H7P9 1386 aa29.11■■■□□ 2.25
HCFC1R1-205ENST00000573842 SLC15A2Q16348 729 aa29.1■■■□□ 2.25
HCFC1R1-205ENST00000573842 AMER1Q5JTC6 1135 aaPredicted RBP29.1■■■□□ 2.25
HCFC1R1-205ENST00000573842 SPG7Q9UQ90 795 aa29.1■■■□□ 2.25
HCFC1R1-205ENST00000573842 TUBGCP6Q96RT7 1819 aa29.09■■■□□ 2.25
HCFC1R1-205ENST00000573842 SLC27A3Q5K4L6 730 aa29.09■■■□□ 2.25
HCFC1R1-205ENST00000573842 SPON1Q9HCB6 807 aa29.09■■■□□ 2.25
HCFC1R1-205ENST00000573842 CYP27B1O15528 508 aa29.07■■■□□ 2.24
HCFC1R1-205ENST00000573842 IGSF1Q8N6C5 1336 aa29.07■■■□□ 2.24
HCFC1R1-205ENST00000573842 C5P01031 1676 aa29.06■■■□□ 2.24
HCFC1R1-205ENST00000573842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.05■■■□□ 2.24
HCFC1R1-205ENST00000573842 LRRC4BQ9NT99 713 aa29.04■■■□□ 2.24
HCFC1R1-205ENST00000573842 TAF1LQ8IZX4 1826 aa29.03■■■□□ 2.24
HCFC1R1-205ENST00000573842 PPP1R1BQ9UD71 204 aaPredicted RBP29.02■■■□□ 2.24
HCFC1R1-205ENST00000573842 PDGFDQ9GZP0 370 aaPredicted RBP29.01■■■□□ 2.23
HCFC1R1-205ENST00000573842 PER1O15534 1290 aaPredicted RBP29■■■□□ 2.23
HCFC1R1-205ENST00000573842 ZNF827Q17R98 1081 aa29■■■□□ 2.23
HCFC1R1-205ENST00000573842 CC2D1BQ5T0F9 858 aaKnown RBP28.99■■■□□ 2.23
HCFC1R1-205ENST00000573842 MPRIPQ6WCQ1 1025 aa28.99■■■□□ 2.23
HCFC1R1-205ENST00000573842 CCNL1Q9UK58 526 aaPredicted RBP28.99■■■□□ 2.23
HCFC1R1-205ENST00000573842 NPC1L1Q9UHC9 1359 aa28.99■■■□□ 2.23
HCFC1R1-205ENST00000573842 ZBTB7AO95365 584 aa28.98■■■□□ 2.23
HCFC1R1-205ENST00000573842 NKX1-1Q15270 411 aaPredicted RBP28.98■■■□□ 2.23
HCFC1R1-205ENST00000573842 IFNL2Q8IZJ0 200 aa28.98■■■□□ 2.23
HCFC1R1-205ENST00000573842 PALLDQ8WX93 1383 aa28.98■■■□□ 2.23
HCFC1R1-205ENST00000573842 PHKG2P15735 406 aa28.96■■■□□ 2.23
HCFC1R1-205ENST00000573842 AKT1S1Q96B36 256 aa28.96■■■□□ 2.23
HCFC1R1-205ENST00000573842 KCNQ4P56696 695 aa28.94■■■□□ 2.22
HCFC1R1-205ENST00000573842 MTFR1LQ9H019 292 aa28.94■■■□□ 2.22
HCFC1R1-205ENST00000573842 KDRP35968 1356 aa28.93■■■□□ 2.22
HCFC1R1-205ENST00000573842 SMARCC1Q92922 1105 aaPredicted RBP28.93■■■□□ 2.22
HCFC1R1-205ENST00000573842 MTHFSP49914 203 aa28.92■■■□□ 2.22
HCFC1R1-205ENST00000573842 HMGB2P26583 209 aaKnown RBP28.91■■■□□ 2.22
HCFC1R1-205ENST00000573842 IL13P35225 146 aa28.91■■■□□ 2.22
HCFC1R1-205ENST00000573842 AMOTQ4VCS5 1084 aa28.91■■■□□ 2.22
HCFC1R1-205ENST00000573842 PLEKHO1Q53GL0 409 aaPredicted RBP28.91■■■□□ 2.22
HCFC1R1-205ENST00000573842 AEBP1Q8IUX7 1158 aa28.91■■■□□ 2.22
HCFC1R1-205ENST00000573842 TMOD3Q9NYL9 352 aa28.91■■■□□ 2.22
HCFC1R1-205ENST00000573842 TFCP2L1Q9NZI6 479 aa28.91■■■□□ 2.22
HCFC1R1-205ENST00000573842 VIRMAQ69YN4 1812 aaKnown RBP28.91■■■□□ 2.22
HCFC1R1-205ENST00000573842 C4BP0C0L5 1744 aa28.91■■■□□ 2.22
HCFC1R1-205ENST00000573842 COL24A1Q17RW2 1714 aa28.91■■■□□ 2.22
HCFC1R1-205ENST00000573842 SULT6B1Q6IMI4 303 aa28.9■■■□□ 2.22
HCFC1R1-205ENST00000573842 ATF5Q9Y2D1 282 aaPredicted RBP28.9■■■□□ 2.22
HCFC1R1-205ENST00000573842 HSP90AB1P08238 724 aaKnown RBP28.89■■■□□ 2.22
HCFC1R1-205ENST00000573842 PIGBQ92521 554 aa28.89■■■□□ 2.22
HCFC1R1-205ENST00000573842 ZNF530Q6P9A1 599 aaPredicted RBP28.88■■■□□ 2.21
HCFC1R1-205ENST00000573842 PNPLA7Q6ZV29 1317 aa28.88■■■□□ 2.21
HCFC1R1-205ENST00000573842 SCN11AQ9UI33 1791 aa28.88■■■□□ 2.21
HCFC1R1-205ENST00000573842 PTGER2P43116 358 aa28.87■■■□□ 2.21
HCFC1R1-205ENST00000573842 CNGB1Q14028 1251 aaPredicted RBP28.87■■■□□ 2.21
HCFC1R1-205ENST00000573842 UBR3Q6ZT12 1888 aa28.85■■■□□ 2.21
HCFC1R1-205ENST00000573842 C1orf141Q5JVX7 400 aa28.85■■■□□ 2.21
HCFC1R1-205ENST00000573842 DCAF5Q96JK2 942 aa28.85■■■□□ 2.21
HCFC1R1-205ENST00000573842 COL3A1P02461 1466 aaPredicted RBP28.85■■■□□ 2.21
HCFC1R1-205ENST00000573842 SLC16A10Q8TF71 515 aa28.84■■■□□ 2.21
HCFC1R1-205ENST00000573842 KDM6AO15550 1401 aaPredicted RBP28.84■■■□□ 2.21
HCFC1R1-205ENST00000573842 ZNF831Q5JPB2 1677 aa28.83■■■□□ 2.21
HCFC1R1-205ENST00000573842 DIAPH1O60610 1272 aaKnown RBP28.83■■■□□ 2.21
HCFC1R1-205ENST00000573842 ERVV-2B6SEH9 535 aa28.81■■■□□ 2.2
HCFC1R1-205ENST00000573842 SGIP1Q9BQI5 828 aa28.8■■■□□ 2.2
HCFC1R1-205ENST00000573842 LOC102724428A0A0B4J2F2 783 aa28.78■■■□□ 2.2
HCFC1R1-205ENST00000573842 SIK1P57059 783 aa28.78■■■□□ 2.2
HCFC1R1-205ENST00000573842 ASAP1Q9ULH1 1129 aa28.78■■■□□ 2.2
HCFC1R1-205ENST00000573842 COL5A3P25940 1745 aaPredicted RBP28.77■■■□□ 2.2
HCFC1R1-205ENST00000573842 HMOX1P09601 288 aa28.77■■■□□ 2.2
HCFC1R1-205ENST00000573842 AK7Q96M32 723 aa28.77■■■□□ 2.2
HCFC1R1-205ENST00000573842 MSH5O43196 834 aa28.76■■■□□ 2.19
HCFC1R1-205ENST00000573842 POLD1P28340 1107 aa28.76■■■□□ 2.19
HCFC1R1-205ENST00000573842 ARXQ96QS3 562 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms