RNA–Protein interactions for RNA: ENST00000573745.1

CLDN7-206, Transcript of claudin 7, humanhuman

TSL 2

Gene CLDN7, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-206ENST00000573745 U2AF1L5P0DN76 240 aaPredicted RBP21.32■■□□□ 1
CLDN7-206ENST00000573745 U2AF1Q01081 240 aaKnown RBP eCLIP21.32■■□□□ 1
CLDN7-206ENST00000573745 AMOTQ4VCS5 1084 aa21.32■■□□□ 1
CLDN7-206ENST00000573745 FAM208AQ9UK61 1670 aaKnown RBP21.31■■□□□ 1
CLDN7-206ENST00000573745 OVOS2A0A0G2JMS6 1433 aa21.31■■□□□ 1
CLDN7-206ENST00000573745 MEGF6O75095 1541 aa21.31■■□□□ 1
CLDN7-206ENST00000573745 KDRP35968 1356 aa21.3■■□□□ 1
CLDN7-206ENST00000573745 COL3A1P02461 1466 aaPredicted RBP21.3■■□□□ 1
CLDN7-206ENST00000573745 FCHSD2O94868 740 aa21.29■■□□□ 1
CLDN7-206ENST00000573745 TNS2Q63HR2 1409 aa21.29■■□□□ 1
CLDN7-206ENST00000573745 PCDH11XQ9BZA7 1347 aa21.28■■□□□ 1
CLDN7-206ENST00000573745 PCDH11YQ9BZA8 1340 aa21.28■■□□□ 1
CLDN7-206ENST00000573745 PLEKHG2Q9H7P9 1386 aa21.27■■□□□ 1
CLDN7-206ENST00000573745 CYP27B1O15528 508 aa21.27■■□□□ 1
CLDN7-206ENST00000573745 TRIM37O94972 964 aa21.27■■□□□ 1
CLDN7-206ENST00000573745 SF3B2Q13435 895 aaKnown RBP21.27■■□□□ 1
CLDN7-206ENST00000573745 IFNL2Q8IZJ0 200 aa21.27■■□□□ 1
CLDN7-206ENST00000573745 RGPD2P0DJD1 1756 aa21.26■□□□□ 0.99
CLDN7-206ENST00000573745 PARP4Q9UKK3 1724 aaKnown RBP21.26■□□□□ 0.99
CLDN7-206ENST00000573745 BCL9O00512 1426 aa21.25■□□□□ 0.99
CLDN7-206ENST00000573745 RSPH6AQ9H0K4 717 aa21.25■□□□□ 0.99
CLDN7-206ENST00000573745 PHKG2P15735 406 aa21.24■□□□□ 0.99
CLDN7-206ENST00000573745 PRKAR2BP31323 418 aa21.24■□□□□ 0.99
CLDN7-206ENST00000573745 NKX1-1Q15270 411 aaPredicted RBP21.24■□□□□ 0.99
CLDN7-206ENST00000573745 BCL11BQ9C0K0 894 aaPredicted RBP21.24■□□□□ 0.99
CLDN7-206ENST00000573745 PNNQ9H307 717 aaKnown RBP21.24■□□□□ 0.99
CLDN7-206ENST00000573745 BRWD3Q6RI45 1802 aa21.24■□□□□ 0.99
CLDN7-206ENST00000573745 ZNF530Q6P9A1 599 aaPredicted RBP21.23■□□□□ 0.99
CLDN7-206ENST00000573745 ACSBG1Q96GR2 724 aa21.23■□□□□ 0.99
CLDN7-206ENST00000573745 HSP90AB1P08238 724 aaKnown RBP21.22■□□□□ 0.99
CLDN7-206ENST00000573745 C1orf141Q5JVX7 400 aa21.22■□□□□ 0.99
CLDN7-206ENST00000573745 LRRC37A3O60309 1634 aa21.22■□□□□ 0.99
CLDN7-206ENST00000573745 KCNQ2O43526 872 aa21.21■□□□□ 0.99
CLDN7-206ENST00000573745 NEFMP07197 916 aa21.21■□□□□ 0.99
CLDN7-206ENST00000573745 PRIM1P49642 420 aaKnown RBP21.21■□□□□ 0.99
CLDN7-206ENST00000573745 WDR43Q15061 677 aaKnown RBP eCLIP21.21■□□□□ 0.99
CLDN7-206ENST00000573745 MTHFSDQ2M296 383 aaKnown RBP21.21■□□□□ 0.99
CLDN7-206ENST00000573745 APBA3O96018 575 aa21.2■□□□□ 0.98
CLDN7-206ENST00000573745 DIEXFQ68CQ4 756 aaKnown RBP21.2■□□□□ 0.98
CLDN7-206ENST00000573745 PHACTR3Q96KR7 559 aa21.2■□□□□ 0.98
CLDN7-206ENST00000573745 CCDC184Q52MB2 194 aa21.19■□□□□ 0.98
CLDN7-206ENST00000573745 AKAP4Q5JQC9 854 aa21.19■□□□□ 0.98
CLDN7-206ENST00000573745 GAS2L2Q8NHY3 880 aa21.19■□□□□ 0.98
CLDN7-206ENST00000573745 RGPD1P0DJD0 1748 aa21.18■□□□□ 0.98
CLDN7-206ENST00000573745 BAG6P46379 1132 aa21.18■□□□□ 0.98
CLDN7-206ENST00000573745 PTF1AQ7RTS3 328 aa21.18■□□□□ 0.98
CLDN7-206ENST00000573745 SYTL4Q96C24 671 aaPredicted RBP21.18■□□□□ 0.98
CLDN7-206ENST00000573745 DCAF5Q96JK2 942 aa21.18■□□□□ 0.98
CLDN7-206ENST00000573745 ADAMTS8Q9UP79 889 aa21.18■□□□□ 0.98
CLDN7-206ENST00000573745 PLEKHF1Q96S99 279 aa21.17■□□□□ 0.98
CLDN7-206ENST00000573745 MRS2Q9HD23 443 aa21.17■□□□□ 0.98
CLDN7-206ENST00000573745 WNK3Q9BYP7 1800 aa21.15■□□□□ 0.98
CLDN7-206ENST00000573745 MPRIPQ6WCQ1 1025 aa21.15■□□□□ 0.98
CLDN7-206ENST00000573745 DEFB132Q7Z7B7 95 aa21.15■□□□□ 0.98
CLDN7-206ENST00000573745 ERVV-2B6SEH9 535 aa21.14■□□□□ 0.97
CLDN7-206ENST00000573745 PLSCR1O15162 318 aa21.14■□□□□ 0.97
CLDN7-206ENST00000573745 GNAT3A8MTJ3 354 aa21.13■□□□□ 0.97
CLDN7-206ENST00000573745 EN1Q05925 392 aaPredicted RBP21.13■□□□□ 0.97
CLDN7-206ENST00000573745 PNISRQ8TF01 805 aaKnown RBP21.13■□□□□ 0.97
CLDN7-206ENST00000573745 LGR6Q9HBX8 967 aa21.12■□□□□ 0.97
CLDN7-206ENST00000573745 MAPK8IP3Q9UPT6 1336 aa21.11■□□□□ 0.97
CLDN7-206ENST00000573745 RNMTO43148 476 aaKnown RBP21.11■□□□□ 0.97
CLDN7-206ENST00000573745 CABP4P57796 275 aa21.11■□□□□ 0.97
CLDN7-206ENST00000573745 CAMKK2Q96RR4 588 aa21.11■□□□□ 0.97
CLDN7-206ENST00000573745 PIGBQ92521 554 aa21.1■□□□□ 0.97
CLDN7-206ENST00000573745 RUNDC1Q96C34 613 aa21.1■□□□□ 0.97
CLDN7-206ENST00000573745 TMOD3Q9NYL9 352 aa21.1■□□□□ 0.97
CLDN7-206ENST00000573745 HTATSF1O43719 755 aaKnown RBP21.09■□□□□ 0.97
CLDN7-206ENST00000573745 EZH2Q15910 746 aaKnown RBP21.08■□□□□ 0.97
CLDN7-206ENST00000573745 NFE2L2Q16236 605 aa21.08■□□□□ 0.97
CLDN7-206ENST00000573745 PKD1L3Q7Z443 1732 aa21.08■□□□□ 0.97
CLDN7-206ENST00000573745 CCDC146Q8IYE0 955 aa21.08■□□□□ 0.97
CLDN7-206ENST00000573745 NFATC2IPQ8NCF5 419 aa21.08■□□□□ 0.97
CLDN7-206ENST00000573745 IL17REQ8NFR9 667 aa21.08■□□□□ 0.97
CLDN7-206ENST00000573745 RTF1Q92541 710 aaKnown RBP21.08■□□□□ 0.97
CLDN7-206ENST00000573745 CCER2I3L3R5 266 aa21.06■□□□□ 0.96
CLDN7-206ENST00000573745 SMARCC1Q92922 1105 aaPredicted RBP21.06■□□□□ 0.96
CLDN7-206ENST00000573745 MAP3K5Q99683 1374 aa21.06■□□□□ 0.96
CLDN7-206ENST00000573745 PROM2Q8N271 834 aa21.05■□□□□ 0.96
CLDN7-206ENST00000573745 SLC52A2Q9HAB3 445 aa21.05■□□□□ 0.96
CLDN7-206ENST00000573745 TMPOP42166 694 aaKnown RBP21.04■□□□□ 0.96
CLDN7-206ENST00000573745 RIPK4P57078 832 aa21.04■□□□□ 0.96
CLDN7-206ENST00000573745 SHANK3Q9BYB0 1731 aa21.04■□□□□ 0.96
CLDN7-206ENST00000573745 KDM6AO15550 1401 aaPredicted RBP21.04■□□□□ 0.96
CLDN7-206ENST00000573745 TXNRD1Q16881 649 aa21.03■□□□□ 0.96
CLDN7-206ENST00000573745 MIER1Q8N108 512 aa21.03■□□□□ 0.96
CLDN7-206ENST00000573745 TEFQ10587 303 aa21.02■□□□□ 0.96
CLDN7-206ENST00000573745 FAM9BQ8IZU0 186 aa21.02■□□□□ 0.96
CLDN7-206ENST00000573745 ATG3Q9NT62 314 aa21.02■□□□□ 0.96
CLDN7-206ENST00000573745 ASAP1Q9ULH1 1129 aa21.02■□□□□ 0.96
CLDN7-206ENST00000573745 EP400Q96L91 3159 aa21.01■□□□□ 0.95
CLDN7-206ENST00000573745 DCTN1Q14203 1278 aa21.01■□□□□ 0.95
CLDN7-206ENST00000573745 NEUROD2Q15784 382 aa21.01■□□□□ 0.95
CLDN7-206ENST00000573745 MCM10Q7L590 875 aa21.01■□□□□ 0.95
CLDN7-206ENST00000573745 APAF1O14727 1248 aa21■□□□□ 0.95
CLDN7-206ENST00000573745 SLC27A3Q5K4L6 730 aa21■□□□□ 0.95
CLDN7-206ENST00000573745 LMOD3Q0VAK6 560 aa20.99■□□□□ 0.95
CLDN7-206ENST00000573745 RRP7AQ9Y3A4 280 aaKnown RBP20.99■□□□□ 0.95
CLDN7-206ENST00000573745 HMGB2P26583 209 aaKnown RBP20.98■□□□□ 0.95
CLDN7-206ENST00000573745 KAT6BQ8WYB5 2073 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms