RNA–Protein interactions for RNA: ENST00000573391.1

STRA6-215, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 4

Gene STRA6, Length 566 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-215ENST00000573391 PAPPAQ13219 1627 aa27.26■■□□□ 1.95
STRA6-215ENST00000573391 ANO8Q9HCE9 1232 aaPredicted RBP27.25■■□□□ 1.95
STRA6-215ENST00000573391 PROM2Q8N271 834 aa27.24■■□□□ 1.95
STRA6-215ENST00000573391 TOGARAM1Q9Y4F4 1720 aa27.21■■□□□ 1.95
STRA6-215ENST00000573391 DDX54Q8TDD1 881 aaKnown RBP27.21■■□□□ 1.95
STRA6-215ENST00000573391 LY75O60449 1722 aa27.21■■□□□ 1.95
STRA6-215ENST00000573391 NBPF14Q5TI25 921 aa27.2■■□□□ 1.94
STRA6-215ENST00000573391 PANK3Q9H999 370 aa27.2■■□□□ 1.94
STRA6-215ENST00000573391 NCAPD2Q15021 1401 aa27.19■■□□□ 1.94
STRA6-215ENST00000573391 TXNRD1Q16881 649 aa27.18■■□□□ 1.94
STRA6-215ENST00000573391 PPM1GO15355 546 aaPredicted RBP27.17■■□□□ 1.94
STRA6-215ENST00000573391 ITGB4P16144 1822 aa27.17■■□□□ 1.94
STRA6-215ENST00000573391 TUBGCP6Q96RT7 1819 aa27.17■■□□□ 1.94
STRA6-215ENST00000573391 ZCRB1Q8TBF4 217 aaKnown RBP27.16■■□□□ 1.94
STRA6-215ENST00000573391 NSD2O96028 1365 aa27.15■■□□□ 1.94
STRA6-215ENST00000573391 POLKQ9UBT6 870 aa27.15■■□□□ 1.94
STRA6-215ENST00000573391 KIF7Q2M1P5 1343 aa27.15■■□□□ 1.94
STRA6-215ENST00000573391 TNNT2P45379 298 aaPredicted RBP27.14■■□□□ 1.94
STRA6-215ENST00000573391 RAPGEF4Q8WZA2 1011 aa27.13■■□□□ 1.93
STRA6-215ENST00000573391 WASHC2AQ641Q2 1341 aa27.13■■□□□ 1.93
STRA6-215ENST00000573391 QSER1Q2KHR3 1735 aa27.12■■□□□ 1.93
STRA6-215ENST00000573391 TATP17735 454 aaPredicted RBP27.1■■□□□ 1.93
STRA6-215ENST00000573391 PDGFDQ9GZP0 370 aaPredicted RBP27.1■■□□□ 1.93
STRA6-215ENST00000573391 SYTL4Q96C24 671 aaPredicted RBP27.08■■□□□ 1.93
STRA6-215ENST00000573391 PRIM1P49642 420 aaKnown RBP27.07■■□□□ 1.92
STRA6-215ENST00000573391 EYA1Q99502 592 aa27.06■■□□□ 1.92
STRA6-215ENST00000573391 LRRC4BQ9NT99 713 aa27.06■■□□□ 1.92
STRA6-215ENST00000573391 PCDH11XQ9BZA7 1347 aa27.06■■□□□ 1.92
STRA6-215ENST00000573391 PCDH11YQ9BZA8 1340 aa27.06■■□□□ 1.92
STRA6-215ENST00000573391 TAF1LQ8IZX4 1826 aa27.06■■□□□ 1.92
STRA6-215ENST00000573391 EIF4A2Q14240 407 aaKnown RBP27.04■■□□□ 1.92
STRA6-215ENST00000573391 SLC15A2Q16348 729 aa27.04■■□□□ 1.92
STRA6-215ENST00000573391 STK32BQ9NY57 414 aa27.04■■□□□ 1.92
STRA6-215ENST00000573391 C5P01031 1676 aa27.04■■□□□ 1.92
STRA6-215ENST00000573391 CYP27B1O15528 508 aa27.03■■□□□ 1.92
STRA6-215ENST00000573391 ZNF827Q17R98 1081 aa27.02■■□□□ 1.92
STRA6-215ENST00000573391 MORC1Q86VD1 984 aa27■■□□□ 1.91
STRA6-215ENST00000573391 KNSTRNQ9Y448 316 aa27■■□□□ 1.91
STRA6-215ENST00000573391 KCNQ4P56696 695 aa26.99■■□□□ 1.91
STRA6-215ENST00000573391 AMER1Q5JTC6 1135 aaPredicted RBP26.99■■□□□ 1.91
STRA6-215ENST00000573391 SPON1Q9HCB6 807 aa26.99■■□□□ 1.91
STRA6-215ENST00000573391 IGSF1Q8N6C5 1336 aa26.98■■□□□ 1.91
STRA6-215ENST00000573391 ZBTB7AO95365 584 aa26.97■■□□□ 1.91
STRA6-215ENST00000573391 COL24A1Q17RW2 1714 aa26.96■■□□□ 1.91
STRA6-215ENST00000573391 SLC27A3Q5K4L6 730 aa26.94■■□□□ 1.9
STRA6-215ENST00000573391 VIRMAQ69YN4 1812 aaKnown RBP26.94■■□□□ 1.9
STRA6-215ENST00000573391 AKT1S1Q96B36 256 aa26.93■■□□□ 1.9
STRA6-215ENST00000573391 PER1O15534 1290 aaPredicted RBP26.92■■□□□ 1.9
STRA6-215ENST00000573391 SPG7Q9UQ90 795 aa26.92■■□□□ 1.9
STRA6-215ENST00000573391 PTGER2P43116 358 aa26.91■■□□□ 1.9
STRA6-215ENST00000573391 ATF5Q9Y2D1 282 aaPredicted RBP26.91■■□□□ 1.9
STRA6-215ENST00000573391 NKX1-1Q15270 411 aaPredicted RBP26.9■■□□□ 1.9
STRA6-215ENST00000573391 PPP1R1BQ9UD71 204 aaPredicted RBP26.9■■□□□ 1.9
STRA6-215ENST00000573391 PLEKHG2Q9H7P9 1386 aa26.89■■□□□ 1.9
STRA6-215ENST00000573391 MPRIPQ6WCQ1 1025 aa26.89■■□□□ 1.9
STRA6-215ENST00000573391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.89■■□□□ 1.9
STRA6-215ENST00000573391 CCNL1Q9UK58 526 aaPredicted RBP26.89■■□□□ 1.9
STRA6-215ENST00000573391 C4BP0C0L5 1744 aa26.89■■□□□ 1.9
STRA6-215ENST00000573391 PALLDQ8WX93 1383 aa26.88■■□□□ 1.89
STRA6-215ENST00000573391 UBR3Q6ZT12 1888 aa26.87■■□□□ 1.89
STRA6-215ENST00000573391 PHKG2P15735 406 aa26.87■■□□□ 1.89
STRA6-215ENST00000573391 AEBP1Q8IUX7 1158 aa26.87■■□□□ 1.89
STRA6-215ENST00000573391 PNPLA7Q6ZV29 1317 aa26.87■■□□□ 1.89
STRA6-215ENST00000573391 CC2D1BQ5T0F9 858 aaKnown RBP26.86■■□□□ 1.89
STRA6-215ENST00000573391 MTFR1LQ9H019 292 aa26.86■■□□□ 1.89
STRA6-215ENST00000573391 SCN11AQ9UI33 1791 aa26.85■■□□□ 1.89
STRA6-215ENST00000573391 SGIP1Q9BQI5 828 aa26.85■■□□□ 1.89
STRA6-215ENST00000573391 IFNL2Q8IZJ0 200 aa26.84■■□□□ 1.89
STRA6-215ENST00000573391 PIGBQ92521 554 aa26.84■■□□□ 1.89
STRA6-215ENST00000573391 KDRP35968 1356 aa26.84■■□□□ 1.89
STRA6-215ENST00000573391 IL13P35225 146 aa26.83■■□□□ 1.89
STRA6-215ENST00000573391 KDM6AO15550 1401 aaPredicted RBP26.82■■□□□ 1.88
STRA6-215ENST00000573391 COL3A1P02461 1466 aaPredicted RBP26.82■■□□□ 1.88
STRA6-215ENST00000573391 MTHFSP49914 203 aa26.8■■□□□ 1.88
STRA6-215ENST00000573391 TFCP2L1Q9NZI6 479 aa26.8■■□□□ 1.88
STRA6-215ENST00000573391 NPC1L1Q9UHC9 1359 aa26.8■■□□□ 1.88
STRA6-215ENST00000573391 COL5A3P25940 1745 aaPredicted RBP26.79■■□□□ 1.88
STRA6-215ENST00000573391 CNGB1Q14028 1251 aaPredicted RBP26.79■■□□□ 1.88
STRA6-215ENST00000573391 SULT6B1Q6IMI4 303 aa26.79■■□□□ 1.88
STRA6-215ENST00000573391 TMOD3Q9NYL9 352 aa26.78■■□□□ 1.88
STRA6-215ENST00000573391 ZNF831Q5JPB2 1677 aa26.78■■□□□ 1.88
STRA6-215ENST00000573391 PLEKHO1Q53GL0 409 aaPredicted RBP26.76■■□□□ 1.87
STRA6-215ENST00000573391 ZNF530Q6P9A1 599 aaPredicted RBP26.76■■□□□ 1.87
STRA6-215ENST00000573391 SMARCC1Q92922 1105 aaPredicted RBP26.76■■□□□ 1.87
STRA6-215ENST00000573391 ASAP1Q9ULH1 1129 aa26.75■■□□□ 1.87
STRA6-215ENST00000573391 FHDC1Q9C0D6 1143 aaPredicted RBP26.74■■□□□ 1.87
STRA6-215ENST00000573391 ADAMTS7Q9UKP4 1686 aa26.73■■□□□ 1.87
STRA6-215ENST00000573391 AMOTQ4VCS5 1084 aa26.72■■□□□ 1.87
STRA6-215ENST00000573391 AMIGO3Q86WK7 504 aa26.72■■□□□ 1.87
STRA6-215ENST00000573391 COL23A1Q86Y22 540 aaPredicted RBP26.72■■□□□ 1.87
STRA6-215ENST00000573391 SLC16A10Q8TF71 515 aa26.72■■□□□ 1.87
STRA6-215ENST00000573391 DCAF5Q96JK2 942 aa26.71■■□□□ 1.87
STRA6-215ENST00000573391 ATG3Q9NT62 314 aa26.71■■□□□ 1.87
STRA6-215ENST00000573391 TJP1Q07157 1748 aa26.7■■□□□ 1.87
STRA6-215ENST00000573391 LOC102724428A0A0B4J2F2 783 aa26.7■■□□□ 1.86
STRA6-215ENST00000573391 HMOX1P09601 288 aa26.7■■□□□ 1.86
STRA6-215ENST00000573391 SIK1P57059 783 aa26.7■■□□□ 1.86
STRA6-215ENST00000573391 ARXQ96QS3 562 aa26.7■■□□□ 1.86
STRA6-215ENST00000573391 LINC00116Q8NCU8 138 aa26.69■■□□□ 1.86
STRA6-215ENST00000573391 CICQ96RK0 1608 aaPredicted RBP26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms