RNA–Protein interactions for RNA: ENST00000572429.5

USP6-203, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 5

Gene USP6, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-203ENST00000572429 CCNL1Q9UK58 526 aaPredicted RBP20.43■□□□□ 0.86
USP6-203ENST00000572429 NME9Q86XW9 330 aa20.42■□□□□ 0.86
USP6-203ENST00000572429 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.42■□□□□ 0.86
USP6-203ENST00000572429 MON2Q7Z3U7 1717 aa20.41■□□□□ 0.86
USP6-203ENST00000572429 DNAJC5GQ8N7S2 189 aa20.4■□□□□ 0.86
USP6-203ENST00000572429 DOT1LQ8TEK3 1739 aa20.4■□□□□ 0.86
USP6-203ENST00000572429 SBNO2Q9Y2G9 1366 aa20.38■□□□□ 0.85
USP6-203ENST00000572429 APLP1P51693 650 aa20.38■□□□□ 0.85
USP6-203ENST00000572429 IP6K1Q92551 441 aa20.36■□□□□ 0.85
USP6-203ENST00000572429 CD163L1Q9NR16 1453 aa20.36■□□□□ 0.85
USP6-203ENST00000572429 USP47Q96K76 1375 aa20.34■□□□□ 0.85
USP6-203ENST00000572429 ZCRB1Q8TBF4 217 aaKnown RBP20.34■□□□□ 0.85
USP6-203ENST00000572429 FAM208AQ9UK61 1670 aaKnown RBP20.34■□□□□ 0.85
USP6-203ENST00000572429 IGSF1Q8N6C5 1336 aa20.33■□□□□ 0.85
USP6-203ENST00000572429 FLAD1Q8NFF5 587 aa20.33■□□□□ 0.85
USP6-203ENST00000572429 LTV1Q96GA3 475 aaPredicted RBP20.33■□□□□ 0.85
USP6-203ENST00000572429 C5P01031 1676 aa20.32■□□□□ 0.84
USP6-203ENST00000572429 WWC3Q9ULE0 1092 aa20.31■□□□□ 0.84
USP6-203ENST00000572429 TOMM70O94826 608 aa20.3■□□□□ 0.84
USP6-203ENST00000572429 MEGF6O75095 1541 aa20.29■□□□□ 0.84
USP6-203ENST00000572429 AMIGO3Q86WK7 504 aa20.28■□□□□ 0.84
USP6-203ENST00000572429 L3MBTL2Q969R5 705 aa20.28■□□□□ 0.84
USP6-203ENST00000572429 EDC4Q6P2E9 1401 aaKnown RBP20.27■□□□□ 0.84
USP6-203ENST00000572429 CICQ96RK0 1608 aaPredicted RBP20.27■□□□□ 0.84
USP6-203ENST00000572429 TAF1LQ8IZX4 1826 aa20.27■□□□□ 0.84
USP6-203ENST00000572429 COL13A1Q5TAT6 717 aaPredicted RBP20.27■□□□□ 0.84
USP6-203ENST00000572429 HMGB2P26583 209 aaKnown RBP20.26■□□□□ 0.83
USP6-203ENST00000572429 ROCK2O75116 1388 aaKnown RBP20.25■□□□□ 0.83
USP6-203ENST00000572429 HDGFL2Q7Z4V5 671 aaPredicted RBP20.25■□□□□ 0.83
USP6-203ENST00000572429 SLC12A5Q9H2X9 1139 aa20.25■□□□□ 0.83
USP6-203ENST00000572429 RGPD2P0DJD1 1756 aa20.25■□□□□ 0.83
USP6-203ENST00000572429 TOGARAM1Q9Y4F4 1720 aa20.24■□□□□ 0.83
USP6-203ENST00000572429 PALLDQ8WX93 1383 aa20.24■□□□□ 0.83
USP6-203ENST00000572429 HOXC9P31274 260 aa20.24■□□□□ 0.83
USP6-203ENST00000572429 MAP3K19Q56UN5 1328 aa20.24■□□□□ 0.83
USP6-203ENST00000572429 C4BP0C0L5 1744 aa20.23■□□□□ 0.83
USP6-203ENST00000572429 TMC1Q8TDI8 760 aa20.23■□□□□ 0.83
USP6-203ENST00000572429 SMIM5Q71RC9 77 aa20.22■□□□□ 0.83
USP6-203ENST00000572429 WDR90Q96KV7 1748 aa20.22■□□□□ 0.83
USP6-203ENST00000572429 A0A1W2PP64 1363 aa20.21■□□□□ 0.83
USP6-203ENST00000572429 JMYQ8N9B5 988 aa20.21■□□□□ 0.83
USP6-203ENST00000572429 KLRG1Q96E93 195 aa20.21■□□□□ 0.83
USP6-203ENST00000572429 AK7Q96M32 723 aa20.21■□□□□ 0.83
USP6-203ENST00000572429 CGNL1Q0VF96 1302 aa20.21■□□□□ 0.83
USP6-203ENST00000572429 UBR3Q6ZT12 1888 aa20.2■□□□□ 0.82
USP6-203ENST00000572429 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.2■□□□□ 0.82
USP6-203ENST00000572429 CAPN15O75808 1086 aa20.2■□□□□ 0.82
USP6-203ENST00000572429 FBLN1P23142 703 aa20.2■□□□□ 0.82
USP6-203ENST00000572429 NBPF6Q5VWK0 638 aa20.2■□□□□ 0.82
USP6-203ENST00000572429 NBPF4Q96M43 638 aa20.2■□□□□ 0.82
USP6-203ENST00000572429 NMRK2Q9NPI5 230 aa20.2■□□□□ 0.82
USP6-203ENST00000572429 PHF14O94880 888 aa20.19■□□□□ 0.82
USP6-203ENST00000572429 AMPHP49418 695 aa20.19■□□□□ 0.82
USP6-203ENST00000572429 TERF2IPQ9NYB0 399 aa20.19■□□□□ 0.82
USP6-203ENST00000572429 HTRA3P83110 453 aa20.18■□□□□ 0.82
USP6-203ENST00000572429 MPRIPQ6WCQ1 1025 aa20.18■□□□□ 0.82
USP6-203ENST00000572429 RBM46Q8TBY0 533 aaKnown RBP20.17■□□□□ 0.82
USP6-203ENST00000572429 NSD3Q9BZ95 1437 aa20.17■□□□□ 0.82
USP6-203ENST00000572429 SSFA2P28290 1259 aa20.16■□□□□ 0.82
USP6-203ENST00000572429 PRELPP51888 382 aa20.16■□□□□ 0.82
USP6-203ENST00000572429 USHBP1Q8N6Y0 703 aa20.16■□□□□ 0.82
USP6-203ENST00000572429 PXDNLA1KZ92 1463 aa20.16■□□□□ 0.82
USP6-203ENST00000572429 KIAA1551Q9HCM1 1747 aa20.16■□□□□ 0.82
USP6-203ENST00000572429 TNS4Q8IZW8 715 aa20.15■□□□□ 0.82
USP6-203ENST00000572429 RAPGEF4Q8WZA2 1011 aa20.15■□□□□ 0.82
USP6-203ENST00000572429 SMARCC1Q92922 1105 aaPredicted RBP20.15■□□□□ 0.82
USP6-203ENST00000572429 COG3Q96JB2 828 aa20.15■□□□□ 0.82
USP6-203ENST00000572429 PCDH11XQ9BZA7 1347 aa20.15■□□□□ 0.82
USP6-203ENST00000572429 PCDH11YQ9BZA8 1340 aa20.15■□□□□ 0.82
USP6-203ENST00000572429 TATP17735 454 aaPredicted RBP20.13■□□□□ 0.81
USP6-203ENST00000572429 BCS1LQ9Y276 419 aa20.13■□□□□ 0.81
USP6-203ENST00000572429 KIF13BQ9NQT8 1826 aa20.13■□□□□ 0.81
USP6-203ENST00000572429 RTL1A6NKG5 1358 aa20.12■□□□□ 0.81
USP6-203ENST00000572429 CYP27B1O15528 508 aa20.12■□□□□ 0.81
USP6-203ENST00000572429 TGFB2P61812 414 aa20.12■□□□□ 0.81
USP6-203ENST00000572429 FSTL1Q12841 308 aa20.12■□□□□ 0.81
USP6-203ENST00000572429 ARHGAP27Q6ZUM4 889 aa20.12■□□□□ 0.81
USP6-203ENST00000572429 LINC00116Q8NCU8 138 aa20.12■□□□□ 0.81
USP6-203ENST00000572429 MAP2P11137 1827 aaKnown RBP20.11■□□□□ 0.81
USP6-203ENST00000572429 ITGB4P16144 1822 aa20.11■□□□□ 0.81
USP6-203ENST00000572429 MMP10P09238 476 aa20.11■□□□□ 0.81
USP6-203ENST00000572429 PUS7Q96PZ0 661 aaKnown RBP20.11■□□□□ 0.81
USP6-203ENST00000572429 N4BP2Q86UW6 1770 aaPredicted RBP20.11■□□□□ 0.81
USP6-203ENST00000572429 A0A0G2JLW4 131 aa20.1■□□□□ 0.81
USP6-203ENST00000572429 PIGBQ92521 554 aa20.1■□□□□ 0.81
USP6-203ENST00000572429 SIN3AQ96ST3 1273 aa20.1■□□□□ 0.81
USP6-203ENST00000572429 LOC102724428A0A0B4J2F2 783 aa20.09■□□□□ 0.81
USP6-203ENST00000572429 SIK1P57059 783 aa20.09■□□□□ 0.81
USP6-203ENST00000572429 RRS1Q15050 365 aaKnown RBP20.09■□□□□ 0.81
USP6-203ENST00000572429 C16orf71Q8IYS4 520 aaPredicted RBP20.08■□□□□ 0.81
USP6-203ENST00000572429 GNPATO15228 680 aa20.07■□□□□ 0.8
USP6-203ENST00000572429 ITPK1Q13572 414 aa20.07■□□□□ 0.8
USP6-203ENST00000572429 C9orf131Q5VYM1 1079 aa20.07■□□□□ 0.8
USP6-203ENST00000572429 C10orf71Q711Q0 1435 aa20.07■□□□□ 0.8
USP6-203ENST00000572429 DPEP1P16444 411 aa20.06■□□□□ 0.8
USP6-203ENST00000572429 SMG6Q86US8 1419 aaKnown RBP20.06■□□□□ 0.8
USP6-203ENST00000572429 FCHSD2O94868 740 aa20.05■□□□□ 0.8
USP6-203ENST00000572429 NKX1-1Q15270 411 aaPredicted RBP20.05■□□□□ 0.8
USP6-203ENST00000572429 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
USP6-203ENST00000572429 PLEKHG2Q9H7P9 1386 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms