RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 CGNL1Q0VF96 1302 aa11.35□□□□□ -0.59
TVP23A-205ENST00000572428 MYBBP1AQ9BQG0 1328 aaKnown RBP11.35□□□□□ -0.59
TVP23A-205ENST00000572428 HDGFL2Q7Z4V5 671 aaPredicted RBP11.35□□□□□ -0.59
TVP23A-205ENST00000572428 FAM43AQ8N2R8 423 aa11.35□□□□□ -0.59
TVP23A-205ENST00000572428 TMC1Q8TDI8 760 aa11.35□□□□□ -0.59
TVP23A-205ENST00000572428 ZHX1Q9UKY1 873 aaPredicted RBP11.35□□□□□ -0.59
TVP23A-205ENST00000572428 NHSL1Q5SYE7 1610 aa11.34□□□□□ -0.59
TVP23A-205ENST00000572428 SHPRHQ149N8 1683 aa11.34□□□□□ -0.59
TVP23A-205ENST00000572428 CCDC96Q2M329 555 aa11.34□□□□□ -0.59
TVP23A-205ENST00000572428 NBPF20Q3BBV1 942 aa11.34□□□□□ -0.59
TVP23A-205ENST00000572428 CRYBG1Q9Y4K1 1723 aa11.34□□□□□ -0.59
TVP23A-205ENST00000572428 ZBED9Q6R2W3 1325 aa11.34□□□□□ -0.59
TVP23A-205ENST00000572428 ZNF335Q9H4Z2 1342 aaPredicted RBP11.34□□□□□ -0.59
TVP23A-205ENST00000572428 CCDC125Q86Z20 511 aa11.34□□□□□ -0.59
TVP23A-205ENST00000572428 CC2D1BQ5T0F9 858 aaKnown RBP11.33□□□□□ -0.6
TVP23A-205ENST00000572428 PHRF1Q9P1Y6 1649 aaKnown RBP11.33□□□□□ -0.6
TVP23A-205ENST00000572428 TTC36A6NLP5 189 aa11.33□□□□□ -0.6
TVP23A-205ENST00000572428 ECM2O94769 699 aaPredicted RBP11.33□□□□□ -0.6
TVP23A-205ENST00000572428 CHMP4CQ96CF2 233 aa11.33□□□□□ -0.6
TVP23A-205ENST00000572428 ACEP12821 1306 aa11.32□□□□□ -0.6
TVP23A-205ENST00000572428 ARMCX6Q7L4S7 300 aa11.32□□□□□ -0.6
TVP23A-205ENST00000572428 INSRP06213 1382 aa11.32□□□□□ -0.6
TVP23A-205ENST00000572428 USP31Q70CQ4 1352 aa11.32□□□□□ -0.6
TVP23A-205ENST00000572428 SMG6Q86US8 1419 aaKnown RBP11.32□□□□□ -0.6
TVP23A-205ENST00000572428 OVOS2A0A0J9YW53 1432 aa11.32□□□□□ -0.6
TVP23A-205ENST00000572428 MSH6P52701 1360 aa11.32□□□□□ -0.6
TVP23A-205ENST00000572428 IQSEC2Q5JU85 1478 aa11.32□□□□□ -0.6
TVP23A-205ENST00000572428 OVOS2Q6IE36 1432 aa11.32□□□□□ -0.6
TVP23A-205ENST00000572428 SPINK5Q9NQ38 1064 aaPredicted RBP11.31□□□□□ -0.6
TVP23A-205ENST00000572428 TTC21AQ8NDW8 1320 aa11.31□□□□□ -0.6
TVP23A-205ENST00000572428 FYB1O15117 783 aa11.31□□□□□ -0.6
TVP23A-205ENST00000572428 CLUAP1Q96AJ1 413 aa11.31□□□□□ -0.6
TVP23A-205ENST00000572428 STK24Q9Y6E0 443 aa11.31□□□□□ -0.6
TVP23A-205ENST00000572428 TSHZ1Q6ZSZ6 1077 aa11.3□□□□□ -0.6
TVP23A-205ENST00000572428 NME8Q8N427 588 aa11.3□□□□□ -0.6
TVP23A-205ENST00000572428 CADPS2Q86UW7 1296 aa11.3□□□□□ -0.6
TVP23A-205ENST00000572428 AATKQ6ZMQ8 1374 aa11.3□□□□□ -0.6
TVP23A-205ENST00000572428 POLD1P28340 1107 aa11.29□□□□□ -0.6
TVP23A-205ENST00000572428 IRF5Q13568 498 aa11.29□□□□□ -0.6
TVP23A-205ENST00000572428 NLRP13Q86W25 1043 aa11.29□□□□□ -0.6
TVP23A-205ENST00000572428 PPP2R1AP30153 589 aa11.29□□□□□ -0.6
TVP23A-205ENST00000572428 EP400NLQ6ZTU2 488 aa11.29□□□□□ -0.6
TVP23A-205ENST00000572428 COL3A1P02461 1466 aaPredicted RBP11.28□□□□□ -0.6
TVP23A-205ENST00000572428 PXDNQ92626 1479 aa11.28□□□□□ -0.6
TVP23A-205ENST00000572428 TTC21BQ7Z4L5 1316 aa11.28□□□□□ -0.6
TVP23A-205ENST00000572428 MED1Q15648 1581 aaPredicted RBP11.28□□□□□ -0.6
TVP23A-205ENST00000572428 PHF8Q9UPP1 1060 aa11.28□□□□□ -0.6
TVP23A-205ENST00000572428 SLIT3O75094 1523 aa11.28□□□□□ -0.6
TVP23A-205ENST00000572428 LTN1O94822 1766 aa11.28□□□□□ -0.6
TVP23A-205ENST00000572428 PNISRQ8TF01 805 aaKnown RBP11.28□□□□□ -0.6
TVP23A-205ENST00000572428 RBM33Q96EV2 1170 aaKnown RBP11.28□□□□□ -0.6
TVP23A-205ENST00000572428 RPS6KL1Q9Y6S9 549 aa11.28□□□□□ -0.6
TVP23A-205ENST00000572428 ABCA3Q99758 1704 aa11.27□□□□□ -0.61
TVP23A-205ENST00000572428 PEAK1Q9H792 1746 aa11.27□□□□□ -0.61
TVP23A-205ENST00000572428 PPP4R3BQ5MIZ7 849 aa11.27□□□□□ -0.61
TVP23A-205ENST00000572428 APBB1IPQ7Z5R6 666 aaPredicted RBP11.27□□□□□ -0.61
TVP23A-205ENST00000572428 AHDC1Q5TGY3 1603 aaPredicted RBP11.27□□□□□ -0.61
TVP23A-205ENST00000572428 PNPLA6Q8IY17 1366 aa11.26□□□□□ -0.61
TVP23A-205ENST00000572428 ATF3P18847 181 aa11.26□□□□□ -0.61
TVP23A-205ENST00000572428 DDRGK1Q96HY6 314 aa11.26□□□□□ -0.61
TVP23A-205ENST00000572428 ROBO1Q9Y6N7 1651 aa11.26□□□□□ -0.61
TVP23A-205ENST00000572428 RGPD1P0DJD0 1748 aa11.26□□□□□ -0.61
TVP23A-205ENST00000572428 NFAT5O94916 1531 aa11.26□□□□□ -0.61
TVP23A-205ENST00000572428 SBNO1A3KN83 1393 aa11.25□□□□□ -0.61
TVP23A-205ENST00000572428 FOXD4Q12950 439 aaPredicted RBP11.25□□□□□ -0.61
TVP23A-205ENST00000572428 NOL8Q76FK4 1167 aaKnown RBP11.25□□□□□ -0.61
TVP23A-205ENST00000572428 ANP32BQ92688 251 aaKnown RBP11.25□□□□□ -0.61
TVP23A-205ENST00000572428 CDK12Q9NYV4 1490 aaPredicted RBP11.25□□□□□ -0.61
TVP23A-205ENST00000572428 MORC1Q86VD1 984 aa11.24□□□□□ -0.61
TVP23A-205ENST00000572428 ZNF513Q8N8E2 541 aaPredicted RBP11.24□□□□□ -0.61
TVP23A-205ENST00000572428 PMFBP1Q8TBY8 1022 aa11.24□□□□□ -0.61
TVP23A-205ENST00000572428 NUTM2FA1L443 756 aa11.24□□□□□ -0.61
TVP23A-205ENST00000572428 COL22A1Q8NFW1 1626 aaPredicted RBP11.24□□□□□ -0.61
TVP23A-205ENST00000572428 ZNF500O60304 480 aaPredicted RBP11.24□□□□□ -0.61
TVP23A-205ENST00000572428 RETREG2Q8NC44 543 aa11.24□□□□□ -0.61
TVP23A-205ENST00000572428 ORAI2Q96SN7 254 aa11.24□□□□□ -0.61
TVP23A-205ENST00000572428 ARID4AP29374 1257 aaPredicted RBP11.23□□□□□ -0.61
TVP23A-205ENST00000572428 ESCO1Q5FWF5 840 aa11.23□□□□□ -0.61
TVP23A-205ENST00000572428 NGDNQ8NEJ9 315 aaKnown RBP11.23□□□□□ -0.61
TVP23A-205ENST00000572428 PDCL3Q9H2J4 239 aa11.23□□□□□ -0.61
TVP23A-205ENST00000572428 BLMP54132 1417 aaPredicted RBP11.23□□□□□ -0.61
TVP23A-205ENST00000572428 ABCC6O95255 1503 aa11.23□□□□□ -0.61
TVP23A-205ENST00000572428 NME9Q86XW9 330 aa11.23□□□□□ -0.61
TVP23A-205ENST00000572428 CARNS1A5YM72 827 aa11.22□□□□□ -0.61
TVP23A-205ENST00000572428 OTUD6BQ8N6M0 293 aa11.22□□□□□ -0.61
TVP23A-205ENST00000572428 FBXW7Q969H0 707 aa11.22□□□□□ -0.61
TVP23A-205ENST00000572428 GGNBP2Q9H3C7 697 aa11.22□□□□□ -0.61
TVP23A-205ENST00000572428 KIF24Q5T7B8 1368 aa11.22□□□□□ -0.61
TVP23A-205ENST00000572428 COL18A1P39060 1754 aa11.22□□□□□ -0.61
TVP23A-205ENST00000572428 CEP120Q8N960 986 aa11.22□□□□□ -0.61
TVP23A-205ENST00000572428 TESPA1A2RU30 521 aaPredicted RBP11.21□□□□□ -0.61
TVP23A-205ENST00000572428 FOSBP53539 338 aa11.21□□□□□ -0.62
TVP23A-205ENST00000572428 MYBPC2Q14324 1141 aa11.21□□□□□ -0.62
TVP23A-205ENST00000572428 BRINP3Q76B58 766 aa11.21□□□□□ -0.62
TVP23A-205ENST00000572428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.21□□□□□ -0.62
TVP23A-205ENST00000572428 SLAIN2Q9P270 581 aa11.21□□□□□ -0.62
TVP23A-205ENST00000572428 CAMTA1Q9Y6Y1 1673 aa11.21□□□□□ -0.62
TVP23A-205ENST00000572428 USP19O94966 1318 aa11.2□□□□□ -0.62
TVP23A-205ENST00000572428 BORCS6Q96GS4 357 aa11.2□□□□□ -0.62
TVP23A-205ENST00000572428 COG3Q96JB2 828 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms