RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 AMPHP49418 695 aa10.68□□□□□ -0.7
SMG6-211ENST00000572369 LARP1Q6PKG0 1096 aaKnown RBP10.68□□□□□ -0.7
SMG6-211ENST00000572369 TOM1L2Q6ZVM7 507 aa10.68□□□□□ -0.7
SMG6-211ENST00000572369 NLGN2Q8NFZ4 835 aa10.68□□□□□ -0.7
SMG6-211ENST00000572369 CARD14Q9BXL6 1004 aa10.68□□□□□ -0.7
SMG6-211ENST00000572369 PANK3Q9H999 370 aa10.68□□□□□ -0.7
SMG6-211ENST00000572369 KIF7Q2M1P5 1343 aa10.67□□□□□ -0.7
SMG6-211ENST00000572369 PROM2Q8N271 834 aa10.67□□□□□ -0.7
SMG6-211ENST00000572369 AXIN2Q9Y2T1 843 aa10.67□□□□□ -0.7
SMG6-211ENST00000572369 ANKRD26Q9UPS8 1709 aa10.67□□□□□ -0.7
SMG6-211ENST00000572369 CRB1P82279 1406 aa10.67□□□□□ -0.7
SMG6-211ENST00000572369 TCP11L2Q8N4U5 519 aa10.66□□□□□ -0.7
SMG6-211ENST00000572369 KNSTRNQ9Y448 316 aa10.66□□□□□ -0.7
SMG6-211ENST00000572369 ABCC6O95255 1503 aa10.66□□□□□ -0.7
SMG6-211ENST00000572369 WDR17Q8IZU2 1322 aa10.65□□□□□ -0.7
SMG6-211ENST00000572369 FBLN1P23142 703 aa10.65□□□□□ -0.7
SMG6-211ENST00000572369 LTV1Q96GA3 475 aaPredicted RBP10.65□□□□□ -0.7
SMG6-211ENST00000572369 MAP2P11137 1827 aaKnown RBP10.65□□□□□ -0.71
SMG6-211ENST00000572369 MAP3K19Q56UN5 1328 aa10.64□□□□□ -0.71
SMG6-211ENST00000572369 PPM1GO15355 546 aaPredicted RBP10.64□□□□□ -0.71
SMG6-211ENST00000572369 ZEB1P37275 1124 aaPredicted RBP10.64□□□□□ -0.71
SMG6-211ENST00000572369 RRS1Q15050 365 aaKnown RBP10.64□□□□□ -0.71
SMG6-211ENST00000572369 ANKRD24Q8TF21 1146 aa10.64□□□□□ -0.71
SMG6-211ENST00000572369 IP6K1Q92551 441 aa10.64□□□□□ -0.71
SMG6-211ENST00000572369 NLRP2Q9NX02 1062 aa10.64□□□□□ -0.71
SMG6-211ENST00000572369 THRAP3Q9Y2W1 955 aaKnown RBP10.64□□□□□ -0.71
SMG6-211ENST00000572369 OVOS2A0A0G2JMS6 1433 aa10.64□□□□□ -0.71
SMG6-211ENST00000572369 PEAK1Q9H792 1746 aa10.64□□□□□ -0.71
SMG6-211ENST00000572369 CCDC7Q96M83 1385 aa10.64□□□□□ -0.71
SMG6-211ENST00000572369 FAM208AQ9UK61 1670 aaKnown RBP10.63□□□□□ -0.71
SMG6-211ENST00000572369 WNK3Q9BYP7 1800 aa10.63□□□□□ -0.71
SMG6-211ENST00000572369 HOXC9P31274 260 aa10.63□□□□□ -0.71
SMG6-211ENST00000572369 TNNT2P45379 298 aaPredicted RBP10.63□□□□□ -0.71
SMG6-211ENST00000572369 MLLT1Q03111 559 aaPredicted RBP10.63□□□□□ -0.71
SMG6-211ENST00000572369 BARGINQ6ZT62 677 aa10.63□□□□□ -0.71
SMG6-211ENST00000572369 SMG6Q86US8 1419 aaKnown RBP10.62□□□□□ -0.71
SMG6-211ENST00000572369 CNGB1Q14028 1251 aaPredicted RBP10.62□□□□□ -0.71
SMG6-211ENST00000572369 MORC1Q86VD1 984 aa10.62□□□□□ -0.71
SMG6-211ENST00000572369 CARD10Q9BWT7 1032 aa10.62□□□□□ -0.71
SMG6-211ENST00000572369 SBF2Q86WG5 1849 aa10.62□□□□□ -0.71
SMG6-211ENST00000572369 PARP4Q9UKK3 1724 aaKnown RBP10.61□□□□□ -0.71
SMG6-211ENST00000572369 ERBB3P21860 1342 aa10.61□□□□□ -0.71
SMG6-211ENST00000572369 WASHC2AQ641Q2 1341 aa10.61□□□□□ -0.71
SMG6-211ENST00000572369 POLD1P28340 1107 aa10.61□□□□□ -0.71
SMG6-211ENST00000572369 RGPD2P0DJD1 1756 aa10.61□□□□□ -0.71
SMG6-211ENST00000572369 RTL1A6NKG5 1358 aa10.61□□□□□ -0.71
SMG6-211ENST00000572369 NSD2O96028 1365 aa10.61□□□□□ -0.71
SMG6-211ENST00000572369 DDB1Q16531 1140 aa10.6□□□□□ -0.71
SMG6-211ENST00000572369 TXNRD1Q16881 649 aa10.6□□□□□ -0.71
SMG6-211ENST00000572369 CDCA7Q9BWT1 371 aaPredicted RBP10.6□□□□□ -0.71
SMG6-211ENST00000572369 EMILIN1Q9Y6C2 1016 aa10.6□□□□□ -0.71
SMG6-211ENST00000572369 COL24A1Q17RW2 1714 aa10.6□□□□□ -0.71
SMG6-211ENST00000572369 FLT4P35916 1363 aa10.6□□□□□ -0.71
SMG6-211ENST00000572369 LRRC37A3O60309 1634 aa10.59□□□□□ -0.71
SMG6-211ENST00000572369 PTF1AQ7RTS3 328 aa10.59□□□□□ -0.71
SMG6-211ENST00000572369 KIF24Q5T7B8 1368 aa10.58□□□□□ -0.72
SMG6-211ENST00000572369 EXOC5O00471 708 aa10.58□□□□□ -0.72
SMG6-211ENST00000572369 IL2RBP14784 551 aa10.58□□□□□ -0.72
SMG6-211ENST00000572369 CC2D1BQ5T0F9 858 aaKnown RBP10.58□□□□□ -0.72
SMG6-211ENST00000572369 RBM46Q8TBY0 533 aaKnown RBP10.58□□□□□ -0.72
SMG6-211ENST00000572369 PAPPAQ13219 1627 aa10.58□□□□□ -0.72
SMG6-211ENST00000572369 INSRP06213 1382 aa10.57□□□□□ -0.72
SMG6-211ENST00000572369 HSP90AB2PQ58FF8 381 aa10.57□□□□□ -0.72
SMG6-211ENST00000572369 POLKQ9UBT6 870 aa10.57□□□□□ -0.72
SMG6-211ENST00000572369 USHBP1Q8N6Y0 703 aa10.56□□□□□ -0.72
SMG6-211ENST00000572369 FSTL1Q12841 308 aa10.55□□□□□ -0.72
SMG6-211ENST00000572369 AMER1Q5JTC6 1135 aaPredicted RBP10.55□□□□□ -0.72
SMG6-211ENST00000572369 NBPF6Q5VWK0 638 aa10.55□□□□□ -0.72
SMG6-211ENST00000572369 SLC16A10Q8TF71 515 aa10.55□□□□□ -0.72
SMG6-211ENST00000572369 NBPF4Q96M43 638 aa10.55□□□□□ -0.72
SMG6-211ENST00000572369 TNRC18O15417 2968 aaPredicted RBP10.54□□□□□ -0.72
SMG6-211ENST00000572369 PER1O15534 1290 aaPredicted RBP10.54□□□□□ -0.72
SMG6-211ENST00000572369 RGS19P49795 217 aa10.54□□□□□ -0.72
SMG6-211ENST00000572369 RAPGEF4Q8WZA2 1011 aa10.54□□□□□ -0.72
SMG6-211ENST00000572369 KAT6BQ8WYB5 2073 aa10.53□□□□□ -0.72
SMG6-211ENST00000572369 TATP17735 454 aaPredicted RBP10.53□□□□□ -0.72
SMG6-211ENST00000572369 ABHD8Q96I13 439 aa10.53□□□□□ -0.72
SMG6-211ENST00000572369 MARCH10Q8NA82 808 aaPredicted RBP10.52□□□□□ -0.73
SMG6-211ENST00000572369 DDX54Q8TDD1 881 aaKnown RBP10.52□□□□□ -0.73
SMG6-211ENST00000572369 NMRK2Q9NPI5 230 aa10.52□□□□□ -0.73
SMG6-211ENST00000572369 PRDM10Q9NQV6 1147 aa10.52□□□□□ -0.73
SMG6-211ENST00000572369 EIF4A2Q14240 407 aaKnown RBP10.51□□□□□ -0.73
SMG6-211ENST00000572369 ZNF827Q17R98 1081 aa10.51□□□□□ -0.73
SMG6-211ENST00000572369 ZCRB1Q8TBF4 217 aaKnown RBP10.51□□□□□ -0.73
SMG6-211ENST00000572369 NPC1L1Q9UHC9 1359 aa10.51□□□□□ -0.73
SMG6-211ENST00000572369 QSER1Q2KHR3 1735 aa10.5□□□□□ -0.73
SMG6-211ENST00000572369 MTHFSP49914 203 aa10.5□□□□□ -0.73
SMG6-211ENST00000572369 DDX10Q13206 875 aaKnown RBP10.5□□□□□ -0.73
SMG6-211ENST00000572369 C16orf71Q8IYS4 520 aaPredicted RBP10.5□□□□□ -0.73
SMG6-211ENST00000572369 EYA1Q99502 592 aa10.5□□□□□ -0.73
SMG6-211ENST00000572369 BCL9O00512 1426 aa10.5□□□□□ -0.73
SMG6-211ENST00000572369 MEGF6O75095 1541 aa10.49□□□□□ -0.73
SMG6-211ENST00000572369 ACSBG1Q96GR2 724 aa10.49□□□□□ -0.73
SMG6-211ENST00000572369 FOXN1O15353 648 aa10.48□□□□□ -0.73
SMG6-211ENST00000572369 SYTL4Q96C24 671 aaPredicted RBP10.48□□□□□ -0.73
SMG6-211ENST00000572369 CFAP53Q96M91 514 aa10.48□□□□□ -0.73
SMG6-211ENST00000572369 SPG7Q9UQ90 795 aa10.48□□□□□ -0.73
SMG6-211ENST00000572369 DOT1LQ8TEK3 1739 aa10.47□□□□□ -0.73
SMG6-211ENST00000572369 PCDH11XQ9BZA7 1347 aa10.47□□□□□ -0.73
SMG6-211ENST00000572369 PCDH11YQ9BZA8 1340 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms