RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 ITGB4P16144 1822 aa12.06□□□□□ -0.48
SMG6-210ENST00000572205 CGNL1Q0VF96 1302 aa12.06□□□□□ -0.48
SMG6-210ENST00000572205 TUBGCP6Q96RT7 1819 aa12.05□□□□□ -0.48
SMG6-210ENST00000572205 TOM1L2Q6ZVM7 507 aa12.04□□□□□ -0.48
SMG6-210ENST00000572205 IFNLR1Q8IU57 520 aaPredicted RBP12.04□□□□□ -0.48
SMG6-210ENST00000572205 NPC1L1Q9UHC9 1359 aa12.04□□□□□ -0.48
SMG6-210ENST00000572205 CASZ1Q86V15 1759 aa12.03□□□□□ -0.48
SMG6-210ENST00000572205 EVA1CP58658 441 aa12.03□□□□□ -0.48
SMG6-210ENST00000572205 MARCH10Q8NA82 808 aaPredicted RBP12.03□□□□□ -0.48
SMG6-210ENST00000572205 ADAMTS7Q9UKP4 1686 aa12.03□□□□□ -0.48
SMG6-210ENST00000572205 HSP90AB2PQ58FF8 381 aa12.02□□□□□ -0.49
SMG6-210ENST00000572205 POLKQ9UBT6 870 aa12.02□□□□□ -0.49
SMG6-210ENST00000572205 LRP5O75197 1615 aa12.01□□□□□ -0.49
SMG6-210ENST00000572205 QSER1Q2KHR3 1735 aa12.01□□□□□ -0.49
SMG6-210ENST00000572205 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
SMG6-210ENST00000572205 PTF1AQ7RTS3 328 aa12.01□□□□□ -0.49
SMG6-210ENST00000572205 DEFB132Q7Z7B7 95 aa12.01□□□□□ -0.49
SMG6-210ENST00000572205 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
SMG6-210ENST00000572205 CCDC125Q86Z20 511 aa12□□□□□ -0.49
SMG6-210ENST00000572205 POLR3GLQ9BT43 218 aa12□□□□□ -0.49
SMG6-210ENST00000572205 TAF1LQ8IZX4 1826 aa12□□□□□ -0.49
SMG6-210ENST00000572205 A0A0G2JS52 829 aa11.99□□□□□ -0.49
SMG6-210ENST00000572205 MYT1Q01538 1121 aa11.99□□□□□ -0.49
SMG6-210ENST00000572205 CDCA7Q9BWT1 371 aaPredicted RBP11.99□□□□□ -0.49
SMG6-210ENST00000572205 SCN11AQ9UI33 1791 aa11.98□□□□□ -0.49
SMG6-210ENST00000572205 COL24A1Q17RW2 1714 aa11.98□□□□□ -0.49
SMG6-210ENST00000572205 CSB-PGBD3P0DP91 1061 aa11.98□□□□□ -0.49
SMG6-210ENST00000572205 DDB1Q16531 1140 aa11.98□□□□□ -0.49
SMG6-210ENST00000572205 NLRP2Q9NX02 1062 aa11.98□□□□□ -0.49
SMG6-210ENST00000572205 CICQ96RK0 1608 aaPredicted RBP11.97□□□□□ -0.49
SMG6-210ENST00000572205 KDRP35968 1356 aa11.97□□□□□ -0.49
SMG6-210ENST00000572205 PLEKHG2Q9H7P9 1386 aa11.97□□□□□ -0.49
SMG6-210ENST00000572205 IGSF1Q8N6C5 1336 aa11.97□□□□□ -0.49
SMG6-210ENST00000572205 IL2RBP14784 551 aa11.97□□□□□ -0.49
SMG6-210ENST00000572205 AMPHP49418 695 aa11.97□□□□□ -0.49
SMG6-210ENST00000572205 FAM196AQ6ZSG2 479 aa11.97□□□□□ -0.49
SMG6-210ENST00000572205 USHBP1Q8N6Y0 703 aa11.97□□□□□ -0.49
SMG6-210ENST00000572205 LTV1Q96GA3 475 aaPredicted RBP11.97□□□□□ -0.49
SMG6-210ENST00000572205 PARD3Q8TEW0 1356 aa11.96□□□□□ -0.49
SMG6-210ENST00000572205 TRIM37O94972 964 aa11.96□□□□□ -0.49
SMG6-210ENST00000572205 PRKCSHP14314 528 aaPredicted RBP11.96□□□□□ -0.49
SMG6-210ENST00000572205 EIF4A2Q14240 407 aaKnown RBP11.96□□□□□ -0.49
SMG6-210ENST00000572205 CAMKK2Q96RR4 588 aa11.96□□□□□ -0.49
SMG6-210ENST00000572205 SIPA1L3O60292 1781 aaPredicted RBP11.96□□□□□ -0.49
SMG6-210ENST00000572205 C5P01031 1676 aa11.96□□□□□ -0.5
SMG6-210ENST00000572205 ZNF831Q5JPB2 1677 aa11.94□□□□□ -0.5
SMG6-210ENST00000572205 PDE3BQ13370 1112 aa11.94□□□□□ -0.5
SMG6-210ENST00000572205 EYA1Q99502 592 aa11.94□□□□□ -0.5
SMG6-210ENST00000572205 COL5A3P25940 1745 aaPredicted RBP11.94□□□□□ -0.5
SMG6-210ENST00000572205 EN1Q05925 392 aaPredicted RBP11.93□□□□□ -0.5
SMG6-210ENST00000572205 MRC1P22897 1456 aa11.92□□□□□ -0.5
SMG6-210ENST00000572205 KCNQ2O43526 872 aa11.92□□□□□ -0.5
SMG6-210ENST00000572205 TNNT2P45379 298 aaPredicted RBP11.92□□□□□ -0.5
SMG6-210ENST00000572205 EZH2Q15910 746 aaKnown RBP11.92□□□□□ -0.5
SMG6-210ENST00000572205 KNSTRNQ9Y448 316 aa11.92□□□□□ -0.5
SMG6-210ENST00000572205 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
SMG6-210ENST00000572205 KDM6AO15550 1401 aaPredicted RBP11.91□□□□□ -0.5
SMG6-210ENST00000572205 KAT6BQ8WYB5 2073 aa11.91□□□□□ -0.5
SMG6-210ENST00000572205 TJP1Q07157 1748 aa11.91□□□□□ -0.5
SMG6-210ENST00000572205 EXOC5O00471 708 aa11.9□□□□□ -0.5
SMG6-210ENST00000572205 CYP27B1O15528 508 aa11.9□□□□□ -0.5
SMG6-210ENST00000572205 IL13P35225 146 aa11.9□□□□□ -0.5
SMG6-210ENST00000572205 BAG6P46379 1132 aa11.9□□□□□ -0.5
SMG6-210ENST00000572205 UBR3Q6ZT12 1888 aa11.9□□□□□ -0.5
SMG6-210ENST00000572205 MORC1Q86VD1 984 aa11.9□□□□□ -0.5
SMG6-210ENST00000572205 BCL11BQ9C0K0 894 aaPredicted RBP11.9□□□□□ -0.5
SMG6-210ENST00000572205 DLG5Q8TDM6 1919 aa11.9□□□□□ -0.51
SMG6-210ENST00000572205 AEBP1Q8IUX7 1158 aa11.89□□□□□ -0.51
SMG6-210ENST00000572205 ANO8Q9HCE9 1232 aaPredicted RBP11.89□□□□□ -0.51
SMG6-210ENST00000572205 PLSCR1O15162 318 aa11.88□□□□□ -0.51
SMG6-210ENST00000572205 PPM1GO15355 546 aaPredicted RBP11.88□□□□□ -0.51
SMG6-210ENST00000572205 CC2D1BQ5T0F9 858 aaKnown RBP11.88□□□□□ -0.51
SMG6-210ENST00000572205 ZCRB1Q8TBF4 217 aaKnown RBP11.88□□□□□ -0.51
SMG6-210ENST00000572205 PCDH11XQ9BZA7 1347 aa11.87□□□□□ -0.51
SMG6-210ENST00000572205 PCDH11YQ9BZA8 1340 aa11.87□□□□□ -0.51
SMG6-210ENST00000572205 C4BP0C0L5 1744 aa11.87□□□□□ -0.51
SMG6-210ENST00000572205 APBA3O96018 575 aa11.87□□□□□ -0.51
SMG6-210ENST00000572205 MTHFSP49914 203 aa11.86□□□□□ -0.51
SMG6-210ENST00000572205 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
SMG6-210ENST00000572205 ACSBG1Q96GR2 724 aa11.86□□□□□ -0.51
SMG6-210ENST00000572205 C4AP0C0L4 1744 aa11.86□□□□□ -0.51
SMG6-210ENST00000572205 SF3B2Q13435 895 aaKnown RBP11.85□□□□□ -0.51
SMG6-210ENST00000572205 VSIG10Q8N0Z9 540 aa11.85□□□□□ -0.51
SMG6-210ENST00000572205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMG6-210ENST00000572205 TAOK2Q9UL54 1235 aa11.85□□□□□ -0.51
SMG6-210ENST00000572205 TATP17735 454 aaPredicted RBP11.84□□□□□ -0.51
SMG6-210ENST00000572205 DDX54Q8TDD1 881 aaKnown RBP11.84□□□□□ -0.51
SMG6-210ENST00000572205 RAPGEF4Q8WZA2 1011 aa11.84□□□□□ -0.51
SMG6-210ENST00000572205 LRRC4BQ9NT99 713 aa11.84□□□□□ -0.51
SMG6-210ENST00000572205 MYH14Q7Z406 1995 aaKnown RBP11.83□□□□□ -0.52
SMG6-210ENST00000572205 KCPQ6ZWJ8 1503 aa11.83□□□□□ -0.52
SMG6-210ENST00000572205 PHKG2P15735 406 aa11.83□□□□□ -0.52
SMG6-210ENST00000572205 PSDA5PKW4 1024 aaPredicted RBP11.82□□□□□ -0.52
SMG6-210ENST00000572205 PPP2R1AP30153 589 aa11.82□□□□□ -0.52
SMG6-210ENST00000572205 TXNRD1Q16881 649 aa11.82□□□□□ -0.52
SMG6-210ENST00000572205 PRIM1P49642 420 aaKnown RBP11.81□□□□□ -0.52
SMG6-210ENST00000572205 KDM3BQ7LBC6 1761 aa11.81□□□□□ -0.52
SMG6-210ENST00000572205 UTRNP46939 3433 aa11.8□□□□□ -0.52
SMG6-210ENST00000572205 GOLGB1Q14789 3259 aaKnown RBP11.8□□□□□ -0.52
SMG6-210ENST00000572205 R3HDM1Q15032 1099 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms