RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 RGPD1P0DJD0 1748 aa21.8■■□□□ 1.08
LITAF-210ENST00000571976 CFAP53Q96M91 514 aa21.8■■□□□ 1.08
LITAF-210ENST00000571976 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.79■■□□□ 1.08
LITAF-210ENST00000571976 PLEKHG2Q9H7P9 1386 aa21.78■■□□□ 1.08
LITAF-210ENST00000571976 BAG6P46379 1132 aa21.78■■□□□ 1.08
LITAF-210ENST00000571976 RALBP1Q15311 655 aa21.78■■□□□ 1.08
LITAF-210ENST00000571976 SPG7Q9UQ90 795 aa21.78■■□□□ 1.08
LITAF-210ENST00000571976 SULT6B1Q6IMI4 303 aa21.77■■□□□ 1.08
LITAF-210ENST00000571976 BCL11BQ9C0K0 894 aaPredicted RBP21.77■■□□□ 1.08
LITAF-210ENST00000571976 PCDH11XQ9BZA7 1347 aa21.77■■□□□ 1.07
LITAF-210ENST00000571976 PCDH11YQ9BZA8 1340 aa21.77■■□□□ 1.07
LITAF-210ENST00000571976 APBA3O96018 575 aa21.76■■□□□ 1.07
LITAF-210ENST00000571976 DEFB132Q7Z7B7 95 aa21.76■■□□□ 1.07
LITAF-210ENST00000571976 COL3A1P02461 1466 aaPredicted RBP21.76■■□□□ 1.07
LITAF-210ENST00000571976 KDRP35968 1356 aa21.75■■□□□ 1.07
LITAF-210ENST00000571976 SBF2Q86WG5 1849 aa21.75■■□□□ 1.07
LITAF-210ENST00000571976 SHANK3Q9BYB0 1731 aa21.75■■□□□ 1.07
LITAF-210ENST00000571976 TNS1Q9HBL0 1735 aaKnown RBP21.75■■□□□ 1.07
LITAF-210ENST00000571976 AEBP1Q8IUX7 1158 aa21.74■■□□□ 1.07
LITAF-210ENST00000571976 PKD1L3Q7Z443 1732 aa21.73■■□□□ 1.07
LITAF-210ENST00000571976 CYP27B1O15528 508 aa21.72■■□□□ 1.07
LITAF-210ENST00000571976 EN1Q05925 392 aaPredicted RBP21.72■■□□□ 1.07
LITAF-210ENST00000571976 PLEKHO1Q53GL0 409 aaPredicted RBP21.72■■□□□ 1.07
LITAF-210ENST00000571976 ACSBG1Q96GR2 724 aa21.72■■□□□ 1.07
LITAF-210ENST00000571976 U2SURPO15042 1029 aaKnown RBP21.71■■□□□ 1.07
LITAF-210ENST00000571976 KCNQ2O43526 872 aa21.71■■□□□ 1.07
LITAF-210ENST00000571976 AMOTQ4VCS5 1084 aa21.71■■□□□ 1.07
LITAF-210ENST00000571976 NUDCQ9Y266 331 aa21.71■■□□□ 1.07
LITAF-210ENST00000571976 HMOX1P09601 288 aa21.7■■□□□ 1.06
LITAF-210ENST00000571976 PTF1AQ7RTS3 328 aa21.7■■□□□ 1.06
LITAF-210ENST00000571976 IFNL2Q8IZJ0 200 aa21.69■■□□□ 1.06
LITAF-210ENST00000571976 NHSQ6T4R5 1651 aa21.69■■□□□ 1.06
LITAF-210ENST00000571976 PLSCR1O15162 318 aa21.68■■□□□ 1.06
LITAF-210ENST00000571976 NKX1-1Q15270 411 aaPredicted RBP21.68■■□□□ 1.06
LITAF-210ENST00000571976 CAMKK2Q96RR4 588 aa21.68■■□□□ 1.06
LITAF-210ENST00000571976 MYBBP1AQ9BQG0 1328 aaKnown RBP21.67■■□□□ 1.06
LITAF-210ENST00000571976 PHKG2P15735 406 aa21.67■■□□□ 1.06
LITAF-210ENST00000571976 PRIM1P49642 420 aaKnown RBP21.67■■□□□ 1.06
LITAF-210ENST00000571976 EZH2Q15910 746 aaKnown RBP21.67■■□□□ 1.06
LITAF-210ENST00000571976 SYTL4Q96C24 671 aaPredicted RBP21.66■■□□□ 1.06
LITAF-210ENST00000571976 PRKRIP1Q9H875 184 aaPredicted RBP21.66■■□□□ 1.06
LITAF-210ENST00000571976 KAT6BQ8WYB5 2073 aa21.65■■□□□ 1.06
LITAF-210ENST00000571976 HSP90AB1P08238 724 aaKnown RBP21.64■■□□□ 1.05
LITAF-210ENST00000571976 U2AF1L5P0DN76 240 aaPredicted RBP21.64■■□□□ 1.05
LITAF-210ENST00000571976 U2AF1Q01081 240 aaKnown RBP eCLIP21.64■■□□□ 1.05
LITAF-210ENST00000571976 ZNF530Q6P9A1 599 aaPredicted RBP21.64■■□□□ 1.05
LITAF-210ENST00000571976 DOT1LQ8TEK3 1739 aa21.63■■□□□ 1.05
LITAF-210ENST00000571976 C1orf141Q5JVX7 400 aa21.63■■□□□ 1.05
LITAF-210ENST00000571976 DCAF5Q96JK2 942 aa21.61■■□□□ 1.05
LITAF-210ENST00000571976 RGPD3A6NKT7 1758 aaPredicted RBP21.61■■□□□ 1.05
LITAF-210ENST00000571976 RGPD4Q7Z3J3 1758 aa21.61■■□□□ 1.05
LITAF-210ENST00000571976 BTAF1O14981 1849 aa21.6■■□□□ 1.05
LITAF-210ENST00000571976 FCHSD2O94868 740 aa21.6■■□□□ 1.05
LITAF-210ENST00000571976 RSPH6AQ9H0K4 717 aa21.6■■□□□ 1.05
LITAF-210ENST00000571976 AKAP4Q5JQC9 854 aa21.59■■□□□ 1.05
LITAF-210ENST00000571976 MPRIPQ6WCQ1 1025 aa21.59■■□□□ 1.05
LITAF-210ENST00000571976 PRKAR2BP31323 418 aa21.58■■□□□ 1.05
LITAF-210ENST00000571976 MTHFSDQ2M296 383 aaKnown RBP21.58■■□□□ 1.05
LITAF-210ENST00000571976 TXNRD1Q16881 649 aa21.57■■□□□ 1.04
LITAF-210ENST00000571976 PROM2Q8N271 834 aa21.57■■□□□ 1.04
LITAF-210ENST00000571976 TOGARAM1Q9Y4F4 1720 aa21.56■■□□□ 1.04
LITAF-210ENST00000571976 ERVV-2B6SEH9 535 aa21.56■■□□□ 1.04
LITAF-210ENST00000571976 TMOD3Q9NYL9 352 aa21.56■■□□□ 1.04
LITAF-210ENST00000571976 RREB1Q92766 1687 aa21.56■■□□□ 1.04
LITAF-210ENST00000571976 GAS2L2Q8NHY3 880 aa21.55■■□□□ 1.04
LITAF-210ENST00000571976 PIGBQ92521 554 aa21.55■■□□□ 1.04
LITAF-210ENST00000571976 ANP32CO43423 234 aa21.54■■□□□ 1.04
LITAF-210ENST00000571976 PNNQ9H307 717 aaKnown RBP21.54■■□□□ 1.04
LITAF-210ENST00000571976 ITGB4P16144 1822 aa21.54■■□□□ 1.04
LITAF-210ENST00000571976 KDM6AO15550 1401 aaPredicted RBP21.54■■□□□ 1.04
LITAF-210ENST00000571976 NBPF14Q5TI25 921 aa21.53■■□□□ 1.04
LITAF-210ENST00000571976 PHACTR3Q96KR7 559 aa21.53■■□□□ 1.04
LITAF-210ENST00000571976 NEFMP07197 916 aa21.52■■□□□ 1.04
LITAF-210ENST00000571976 CABP4P57796 275 aa21.52■■□□□ 1.04
LITAF-210ENST00000571976 SLC27A3Q5K4L6 730 aa21.52■■□□□ 1.04
LITAF-210ENST00000571976 SMARCC1Q92922 1105 aaPredicted RBP21.52■■□□□ 1.04
LITAF-210ENST00000571976 NUP188Q5SRE5 1749 aa21.52■■□□□ 1.03
LITAF-210ENST00000571976 MAP3K5Q99683 1374 aa21.49■■□□□ 1.03
LITAF-210ENST00000571976 GNAT3A8MTJ3 354 aa21.49■■□□□ 1.03
LITAF-210ENST00000571976 RNMTO43148 476 aaKnown RBP21.49■■□□□ 1.03
LITAF-210ENST00000571976 LGR6Q9HBX8 967 aa21.49■■□□□ 1.03
LITAF-210ENST00000571976 PALLDQ8WX93 1383 aa21.48■■□□□ 1.03
LITAF-210ENST00000571976 WDR43Q15061 677 aaKnown RBP eCLIP21.48■■□□□ 1.03
LITAF-210ENST00000571976 PLEKHF1Q96S99 279 aa21.48■■□□□ 1.03
LITAF-210ENST00000571976 LRRC4BQ9NT99 713 aa21.48■■□□□ 1.03
LITAF-210ENST00000571976 SCN11AQ9UI33 1791 aa21.47■■□□□ 1.03
LITAF-210ENST00000571976 NFATC2IPQ8NCF5 419 aa21.47■■□□□ 1.03
LITAF-210ENST00000571976 CCNL1Q9UK58 526 aaPredicted RBP21.47■■□□□ 1.03
LITAF-210ENST00000571976 ASAP1Q9ULH1 1129 aa21.47■■□□□ 1.03
LITAF-210ENST00000571976 LY75O60449 1722 aa21.46■■□□□ 1.03
LITAF-210ENST00000571976 HMGB2P26583 209 aaKnown RBP21.46■■□□□ 1.03
LITAF-210ENST00000571976 R3HDM1Q15032 1099 aaKnown RBP21.46■■□□□ 1.03
LITAF-210ENST00000571976 SLC52A2Q9HAB3 445 aa21.46■■□□□ 1.03
LITAF-210ENST00000571976 ATG3Q9NT62 314 aa21.46■■□□□ 1.03
LITAF-210ENST00000571976 ADAMTS7Q9UKP4 1686 aa21.44■■□□□ 1.02
LITAF-210ENST00000571976 PSDA5PKW4 1024 aaPredicted RBP21.44■■□□□ 1.02
LITAF-210ENST00000571976 IL17REQ8NFR9 667 aa21.44■■□□□ 1.02
LITAF-210ENST00000571976 ANO8Q9HCE9 1232 aaPredicted RBP21.44■■□□□ 1.02
LITAF-210ENST00000571976 STK32BQ9NY57 414 aa21.44■■□□□ 1.02
LITAF-210ENST00000571976 MAPK8IP3Q9UPT6 1336 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms