RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 PARD3Q8TEW0 1356 aa11.75□□□□□ -0.53
TRAPPC1-203ENST00000571739 OVOS2A0A0G2JMS6 1433 aa11.75□□□□□ -0.53
TRAPPC1-203ENST00000571739 BCL9O00512 1426 aa11.75□□□□□ -0.53
TRAPPC1-203ENST00000571739 TNS2Q63HR2 1409 aa11.75□□□□□ -0.53
TRAPPC1-203ENST00000571739 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC1-203ENST00000571739 ACSBG1Q96GR2 724 aa11.74□□□□□ -0.53
TRAPPC1-203ENST00000571739 APBA3O96018 575 aa11.73□□□□□ -0.53
TRAPPC1-203ENST00000571739 SF3B2Q13435 895 aaKnown RBP11.73□□□□□ -0.53
TRAPPC1-203ENST00000571739 BCL11BQ9C0K0 894 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC1-203ENST00000571739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRAPPC1-203ENST00000571739 HMOX1P09601 288 aa11.72□□□□□ -0.53
TRAPPC1-203ENST00000571739 RALBP1Q15311 655 aa11.72□□□□□ -0.53
TRAPPC1-203ENST00000571739 EZH2Q15910 746 aaKnown RBP11.72□□□□□ -0.53
TRAPPC1-203ENST00000571739 CAMKK2Q96RR4 588 aa11.72□□□□□ -0.53
TRAPPC1-203ENST00000571739 COL3A1P02461 1466 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC1-203ENST00000571739 KDRP35968 1356 aa11.71□□□□□ -0.53
TRAPPC1-203ENST00000571739 BAG6P46379 1132 aa11.71□□□□□ -0.53
TRAPPC1-203ENST00000571739 NKX1-1Q15270 411 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC1-203ENST00000571739 SPG7Q9UQ90 795 aa11.71□□□□□ -0.53
TRAPPC1-203ENST00000571739 SBF2Q86WG5 1849 aa11.7□□□□□ -0.54
TRAPPC1-203ENST00000571739 RGPD1P0DJD0 1748 aa11.7□□□□□ -0.54
TRAPPC1-203ENST00000571739 U2SURPO15042 1029 aaKnown RBP11.7□□□□□ -0.54
TRAPPC1-203ENST00000571739 PLSCR1O15162 318 aa11.7□□□□□ -0.54
TRAPPC1-203ENST00000571739 PRIM1P49642 420 aaKnown RBP11.7□□□□□ -0.54
TRAPPC1-203ENST00000571739 PROM2Q8N271 834 aa11.7□□□□□ -0.54
TRAPPC1-203ENST00000571739 PRKRIP1Q9H875 184 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC1-203ENST00000571739 EP400Q96L91 3159 aa11.69□□□□□ -0.54
TRAPPC1-203ENST00000571739 SHANK3Q9BYB0 1731 aa11.69□□□□□ -0.54
TRAPPC1-203ENST00000571739 PCDH11XQ9BZA7 1347 aa11.69□□□□□ -0.54
TRAPPC1-203ENST00000571739 PCDH11YQ9BZA8 1340 aa11.69□□□□□ -0.54
TRAPPC1-203ENST00000571739 PHKG2P15735 406 aa11.69□□□□□ -0.54
TRAPPC1-203ENST00000571739 PLEKHO1Q53GL0 409 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC1-203ENST00000571739 CFAP53Q96M91 514 aa11.69□□□□□ -0.54
TRAPPC1-203ENST00000571739 KAT6BQ8WYB5 2073 aa11.68□□□□□ -0.54
TRAPPC1-203ENST00000571739 AMOTQ4VCS5 1084 aa11.68□□□□□ -0.54
TRAPPC1-203ENST00000571739 IFNL2Q8IZJ0 200 aa11.68□□□□□ -0.54
TRAPPC1-203ENST00000571739 MTHFSDQ2M296 383 aaKnown RBP11.67□□□□□ -0.54
TRAPPC1-203ENST00000571739 TNS1Q9HBL0 1735 aaKnown RBP11.66□□□□□ -0.54
TRAPPC1-203ENST00000571739 U2AF1L5P0DN76 240 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC1-203ENST00000571739 U2AF1Q01081 240 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRAPPC1-203ENST00000571739 SYTL4Q96C24 671 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC1-203ENST00000571739 PHACTR3Q96KR7 559 aa11.66□□□□□ -0.54
TRAPPC1-203ENST00000571739 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
TRAPPC1-203ENST00000571739 NUDCQ9Y266 331 aa11.66□□□□□ -0.54
TRAPPC1-203ENST00000571739 PKD1L3Q7Z443 1732 aa11.66□□□□□ -0.54
TRAPPC1-203ENST00000571739 MYBBP1AQ9BQG0 1328 aaKnown RBP11.65□□□□□ -0.54
TRAPPC1-203ENST00000571739 FCHSD2O94868 740 aa11.65□□□□□ -0.54
TRAPPC1-203ENST00000571739 ZNF530Q6P9A1 599 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC1-203ENST00000571739 MPRIPQ6WCQ1 1025 aa11.65□□□□□ -0.54
TRAPPC1-203ENST00000571739 PIGBQ92521 554 aa11.65□□□□□ -0.54
TRAPPC1-203ENST00000571739 PLEKHG2Q9H7P9 1386 aa11.65□□□□□ -0.55
TRAPPC1-203ENST00000571739 PRKAR2BP31323 418 aa11.64□□□□□ -0.55
TRAPPC1-203ENST00000571739 TXNRD1Q16881 649 aa11.64□□□□□ -0.55
TRAPPC1-203ENST00000571739 LGR6Q9HBX8 967 aa11.64□□□□□ -0.55
TRAPPC1-203ENST00000571739 CCDC184Q52MB2 194 aa11.63□□□□□ -0.55
TRAPPC1-203ENST00000571739 AKAP4Q5JQC9 854 aa11.63□□□□□ -0.55
TRAPPC1-203ENST00000571739 DCAF5Q96JK2 942 aa11.63□□□□□ -0.55
TRAPPC1-203ENST00000571739 NHSQ6T4R5 1651 aa11.62□□□□□ -0.55
TRAPPC1-203ENST00000571739 ERVV-2B6SEH9 535 aa11.62□□□□□ -0.55
TRAPPC1-203ENST00000571739 HSP90AB1P08238 724 aaKnown RBP11.62□□□□□ -0.55
TRAPPC1-203ENST00000571739 KCNQ4P56696 695 aa11.62□□□□□ -0.55
TRAPPC1-203ENST00000571739 C1orf141Q5JVX7 400 aa11.62□□□□□ -0.55
TRAPPC1-203ENST00000571739 PLEKHF1Q96S99 279 aa11.62□□□□□ -0.55
TRAPPC1-203ENST00000571739 LRRC4BQ9NT99 713 aa11.62□□□□□ -0.55
TRAPPC1-203ENST00000571739 NFATC2IPQ8NCF5 419 aa11.61□□□□□ -0.55
TRAPPC1-203ENST00000571739 IL17REQ8NFR9 667 aa11.61□□□□□ -0.55
TRAPPC1-203ENST00000571739 KDM6AO15550 1401 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC1-203ENST00000571739 BTAF1O14981 1849 aa11.6□□□□□ -0.55
TRAPPC1-203ENST00000571739 RNMTO43148 476 aaKnown RBP11.6□□□□□ -0.55
TRAPPC1-203ENST00000571739 ATG3Q9NT62 314 aa11.6□□□□□ -0.55
TRAPPC1-203ENST00000571739 ASAP1Q9ULH1 1129 aa11.6□□□□□ -0.55
TRAPPC1-203ENST00000571739 DOT1LQ8TEK3 1739 aa11.6□□□□□ -0.55
TRAPPC1-203ENST00000571739 TOGARAM1Q9Y4F4 1720 aa11.6□□□□□ -0.55
TRAPPC1-203ENST00000571739 CABP4P57796 275 aa11.59□□□□□ -0.55
TRAPPC1-203ENST00000571739 GAS2L2Q8NHY3 880 aa11.59□□□□□ -0.55
TRAPPC1-203ENST00000571739 TMOD3Q9NYL9 352 aa11.59□□□□□ -0.55
TRAPPC1-203ENST00000571739 ADAMTS8Q9UP79 889 aa11.59□□□□□ -0.55
TRAPPC1-203ENST00000571739 ITGB4P16144 1822 aa11.58□□□□□ -0.56
TRAPPC1-203ENST00000571739 PSDA5PKW4 1024 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC1-203ENST00000571739 GNAT3A8MTJ3 354 aa11.58□□□□□ -0.56
TRAPPC1-203ENST00000571739 ANP32CO43423 234 aa11.58□□□□□ -0.56
TRAPPC1-203ENST00000571739 R3HDM1Q15032 1099 aaKnown RBP11.58□□□□□ -0.56
TRAPPC1-203ENST00000571739 ANO8Q9HCE9 1232 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC1-203ENST00000571739 SLC27A3Q5K4L6 730 aa11.57□□□□□ -0.56
TRAPPC1-203ENST00000571739 NBPF14Q5TI25 921 aa11.57□□□□□ -0.56
TRAPPC1-203ENST00000571739 SMARCC1Q92922 1105 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC1-203ENST00000571739 SLC4A9Q96Q91 983 aa11.57□□□□□ -0.56
TRAPPC1-203ENST00000571739 SLC52A2Q9HAB3 445 aa11.57□□□□□ -0.56
TRAPPC1-203ENST00000571739 PALLDQ8WX93 1383 aa11.56□□□□□ -0.56
TRAPPC1-203ENST00000571739 RREB1Q92766 1687 aa11.56□□□□□ -0.56
TRAPPC1-203ENST00000571739 SLC15A2Q16348 729 aa11.56□□□□□ -0.56
TRAPPC1-203ENST00000571739 CCNL1Q9UK58 526 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC1-203ENST00000571739 RGPD3A6NKT7 1758 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC1-203ENST00000571739 RGPD4Q7Z3J3 1758 aa11.55□□□□□ -0.56
TRAPPC1-203ENST00000571739 DCTN1Q14203 1278 aa11.55□□□□□ -0.56
TRAPPC1-203ENST00000571739 AKT1S1Q96B36 256 aa11.55□□□□□ -0.56
TRAPPC1-203ENST00000571739 PDGFDQ9GZP0 370 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC1-203ENST00000571739 PNNQ9H307 717 aaKnown RBP11.55□□□□□ -0.56
TRAPPC1-203ENST00000571739 NUP188Q5SRE5 1749 aa11.55□□□□□ -0.56
TRAPPC1-203ENST00000571739 MAP3K5Q99683 1374 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms