RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 USP54Q70EL1 1684 aa18.91■□□□□ 0.62
RPAIN-209ENST00000571558 KLHL34Q8N239 644 aa18.91■□□□□ 0.62
RPAIN-209ENST00000571558 DDX10Q13206 875 aaKnown RBP18.9■□□□□ 0.62
RPAIN-209ENST00000571558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.9■□□□□ 0.62
RPAIN-209ENST00000571558 PELP1Q8IZL8 1130 aaKnown RBP18.89■□□□□ 0.61
RPAIN-209ENST00000571558 POLR3GLQ9BT43 218 aa18.89■□□□□ 0.61
RPAIN-209ENST00000571558 MON2Q7Z3U7 1717 aa18.89■□□□□ 0.61
RPAIN-209ENST00000571558 ANKRD36BQ8N2N9 1353 aa18.87■□□□□ 0.61
RPAIN-209ENST00000571558 HDGFL2Q7Z4V5 671 aaPredicted RBP18.87■□□□□ 0.61
RPAIN-209ENST00000571558 NME9Q86XW9 330 aa18.87■□□□□ 0.61
RPAIN-209ENST00000571558 DDX54Q8TDD1 881 aaKnown RBP18.87■□□□□ 0.61
RPAIN-209ENST00000571558 NLGN2Q8NFZ4 835 aa18.86■□□□□ 0.61
RPAIN-209ENST00000571558 IP6K1Q92551 441 aa18.86■□□□□ 0.61
RPAIN-209ENST00000571558 SHANK3Q9BYB0 1731 aa18.85■□□□□ 0.61
RPAIN-209ENST00000571558 EDC4Q6P2E9 1401 aaKnown RBP18.85■□□□□ 0.61
RPAIN-209ENST00000571558 LTN1O94822 1766 aa18.84■□□□□ 0.61
RPAIN-209ENST00000571558 KAT6BQ8WYB5 2073 aa18.84■□□□□ 0.61
RPAIN-209ENST00000571558 PRIM1P49642 420 aaKnown RBP18.83■□□□□ 0.61
RPAIN-209ENST00000571558 SYTL4Q96C24 671 aaPredicted RBP18.83■□□□□ 0.61
RPAIN-209ENST00000571558 SLC12A5Q9H2X9 1139 aa18.83■□□□□ 0.61
RPAIN-209ENST00000571558 TERF2IPQ9NYB0 399 aa18.83■□□□□ 0.61
RPAIN-209ENST00000571558 CD163L1Q9NR16 1453 aa18.83■□□□□ 0.61
RPAIN-209ENST00000571558 YBX3P16989 372 aaKnown RBP eCLIP18.83■□□□□ 0.61e-7■□□□□ 10.3
RPAIN-209ENST00000571558 FAM208AQ9UK61 1670 aaKnown RBP18.82■□□□□ 0.6
RPAIN-209ENST00000571558 CD2APQ9Y5K6 639 aa18.82■□□□□ 0.6
RPAIN-209ENST00000571558 PANK3Q9H999 370 aa18.81■□□□□ 0.6
RPAIN-209ENST00000571558 CCNL1Q9UK58 526 aaPredicted RBP18.81■□□□□ 0.6
RPAIN-209ENST00000571558 DIEXFQ68CQ4 756 aaKnown RBP18.8■□□□□ 0.6
RPAIN-209ENST00000571558 FLAD1Q8NFF5 587 aa18.8■□□□□ 0.6
RPAIN-209ENST00000571558 ZCRB1Q8TBF4 217 aaKnown RBP18.8■□□□□ 0.6
RPAIN-209ENST00000571558 TMC1Q8TDI8 760 aa18.8■□□□□ 0.6
RPAIN-209ENST00000571558 LY75O60449 1722 aa18.79■□□□□ 0.6
RPAIN-209ENST00000571558 NSD2O96028 1365 aa18.79■□□□□ 0.6
RPAIN-209ENST00000571558 PER1O15534 1290 aaPredicted RBP18.79■□□□□ 0.6
RPAIN-209ENST00000571558 GPBP1L1Q9HC44 474 aaPredicted RBP18.79■□□□□ 0.6
RPAIN-209ENST00000571558 CGNL1Q0VF96 1302 aa18.79■□□□□ 0.6
RPAIN-209ENST00000571558 ATP10DQ9P241 1426 aa18.78■□□□□ 0.6
RPAIN-209ENST00000571558 MSH5O43196 834 aa18.78■□□□□ 0.6
RPAIN-209ENST00000571558 KCNQ4P56696 695 aa18.78■□□□□ 0.6
RPAIN-209ENST00000571558 COL23A1Q86Y22 540 aaPredicted RBP18.78■□□□□ 0.6
RPAIN-209ENST00000571558 CARD14Q9BXL6 1004 aa18.78■□□□□ 0.6
RPAIN-209ENST00000571558 A0A1W2PP64 1363 aa18.77■□□□□ 0.59
RPAIN-209ENST00000571558 TUBGCP6Q96RT7 1819 aa18.77■□□□□ 0.59
RPAIN-209ENST00000571558 HSPA6P17066 643 aa18.75■□□□□ 0.59
RPAIN-209ENST00000571558 LTV1Q96GA3 475 aaPredicted RBP18.75■□□□□ 0.59
RPAIN-209ENST00000571558 HOXC9P31274 260 aa18.74■□□□□ 0.59
RPAIN-209ENST00000571558 COG3Q96JB2 828 aa18.74■□□□□ 0.59
RPAIN-209ENST00000571558 DOT1LQ8TEK3 1739 aa18.74■□□□□ 0.59
RPAIN-209ENST00000571558 ADCY9O60503 1353 aa18.73■□□□□ 0.59
RPAIN-209ENST00000571558 AMPHP49418 695 aa18.73■□□□□ 0.59
RPAIN-209ENST00000571558 MAP3K19Q56UN5 1328 aa18.73■□□□□ 0.59
RPAIN-209ENST00000571558 NSD3Q9BZ95 1437 aa18.72■□□□□ 0.59
RPAIN-209ENST00000571558 RTL1A6NKG5 1358 aa18.71■□□□□ 0.59
RPAIN-209ENST00000571558 AMER1Q5JTC6 1135 aaPredicted RBP18.7■□□□□ 0.58
RPAIN-209ENST00000571558 MEGF6O75095 1541 aa18.69■□□□□ 0.58
RPAIN-209ENST00000571558 NPC1L1Q9UHC9 1359 aa18.69■□□□□ 0.58
RPAIN-209ENST00000571558 MSL1Q68DK7 614 aa18.69■□□□□ 0.58
RPAIN-209ENST00000571558 RAPGEF4Q8WZA2 1011 aa18.69■□□□□ 0.58
RPAIN-209ENST00000571558 KNSTRNQ9Y448 316 aa18.68■□□□□ 0.58
RPAIN-209ENST00000571558 PCDH11XQ9BZA7 1347 aa18.67■□□□□ 0.58
RPAIN-209ENST00000571558 PCDH11YQ9BZA8 1340 aa18.67■□□□□ 0.58
RPAIN-209ENST00000571558 NBPF6Q5VWK0 638 aa18.66■□□□□ 0.58
RPAIN-209ENST00000571558 SMARCC1Q92922 1105 aaPredicted RBP18.66■□□□□ 0.58
RPAIN-209ENST00000571558 NBPF4Q96M43 638 aa18.66■□□□□ 0.58
RPAIN-209ENST00000571558 SMG6Q86US8 1419 aaKnown RBP18.66■□□□□ 0.58
RPAIN-209ENST00000571558 PALLDQ8WX93 1383 aa18.66■□□□□ 0.58
RPAIN-209ENST00000571558 TATP17735 454 aaPredicted RBP18.66■□□□□ 0.58
RPAIN-209ENST00000571558 C5P01031 1676 aa18.65■□□□□ 0.58
RPAIN-209ENST00000571558 AK7Q96M32 723 aa18.64■□□□□ 0.57
RPAIN-209ENST00000571558 IGSF1Q8N6C5 1336 aa18.63■□□□□ 0.57
RPAIN-209ENST00000571558 ZNF526Q8TF50 670 aaPredicted RBP18.63■□□□□ 0.57
RPAIN-209ENST00000571558 PRKRIP1Q9H875 184 aaPredicted RBP18.63■□□□□ 0.57
RPAIN-209ENST00000571558 FYB1O15117 783 aa18.62■□□□□ 0.57
RPAIN-209ENST00000571558 MPRIPQ6WCQ1 1025 aa18.62■□□□□ 0.57
RPAIN-209ENST00000571558 KIF24Q5T7B8 1368 aa18.62■□□□□ 0.57
RPAIN-209ENST00000571558 SSFA2P28290 1259 aa18.61■□□□□ 0.57
RPAIN-209ENST00000571558 APLP1P51693 650 aa18.61■□□□□ 0.57
RPAIN-209ENST00000571558 KIF3CO14782 793 aa18.6■□□□□ 0.57
RPAIN-209ENST00000571558 ANP32CO43423 234 aa18.6■□□□□ 0.57
RPAIN-209ENST00000571558 FBLN1P23142 703 aa18.6■□□□□ 0.57
RPAIN-209ENST00000571558 CC2D1BQ5T0F9 858 aaKnown RBP18.6■□□□□ 0.57
RPAIN-209ENST00000571558 MIER1Q8N108 512 aa18.6■□□□□ 0.57
RPAIN-209ENST00000571558 INSRP06213 1382 aa18.6■□□□□ 0.57
RPAIN-209ENST00000571558 TAF1LQ8IZX4 1826 aa18.6■□□□□ 0.57
RPAIN-209ENST00000571558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.59■□□□□ 0.57
RPAIN-209ENST00000571558 C4BP0C0L5 1744 aa18.59■□□□□ 0.57
RPAIN-209ENST00000571558 RGPD2P0DJD1 1756 aa18.59■□□□□ 0.57
RPAIN-209ENST00000571558 ADRA2BP18089 450 aa18.58■□□□□ 0.57
RPAIN-209ENST00000571558 RRS1Q15050 365 aaKnown RBP18.58■□□□□ 0.57
RPAIN-209ENST00000571558 KIF20BQ96Q89 1820 aa18.58■□□□□ 0.56
RPAIN-209ENST00000571558 CYP27B1O15528 508 aa18.57■□□□□ 0.56
RPAIN-209ENST00000571558 TOMM70O94826 608 aa18.57■□□□□ 0.56
RPAIN-209ENST00000571558 USHBP1Q8N6Y0 703 aa18.57■□□□□ 0.56
RPAIN-209ENST00000571558 NKX1-1Q15270 411 aaPredicted RBP18.57■□□□□ 0.56
RPAIN-209ENST00000571558 RALBP1Q15311 655 aa18.57■□□□□ 0.56
RPAIN-209ENST00000571558 GGNBP2Q9H3C7 697 aa18.57■□□□□ 0.56
RPAIN-209ENST00000571558 ANKRD26Q9UPS8 1709 aa18.56■□□□□ 0.56
RPAIN-209ENST00000571558 FLT4P35916 1363 aa18.56■□□□□ 0.56
RPAIN-209ENST00000571558 CICQ96RK0 1608 aaPredicted RBP18.55■□□□□ 0.56
RPAIN-209ENST00000571558 TGFB2P61812 414 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms