RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 SLIT2O94813 1529 aa15.61■□□□□ 0.09
CDRT1-206ENST00000571263 MTHFSDQ2M296 383 aaKnown RBP15.6■□□□□ 0.09
CDRT1-206ENST00000571263 LARP1Q6PKG0 1096 aaKnown RBP15.6■□□□□ 0.09
CDRT1-206ENST00000571263 UNC5CLQ8IV45 518 aa15.6■□□□□ 0.09
CDRT1-206ENST00000571263 IL16Q14005 1332 aa15.6■□□□□ 0.09
CDRT1-206ENST00000571263 GNAT3A8MTJ3 354 aa15.59■□□□□ 0.09
CDRT1-206ENST00000571263 E9PSI1 815 aa15.59■□□□□ 0.09
CDRT1-206ENST00000571263 IL2RBP14784 551 aa15.59■□□□□ 0.09
CDRT1-206ENST00000571263 C8orf37Q96NL8 207 aa15.59■□□□□ 0.09
CDRT1-206ENST00000571263 RRP7AQ9Y3A4 280 aaKnown RBP15.59■□□□□ 0.09
CDRT1-206ENST00000571263 PLCH1Q4KWH8 1693 aa15.58■□□□□ 0.08
CDRT1-206ENST00000571263 AKAP4Q5JQC9 854 aa15.58■□□□□ 0.08
CDRT1-206ENST00000571263 C1orf141Q5JVX7 400 aa15.58■□□□□ 0.08
CDRT1-206ENST00000571263 TRIM35Q9UPQ4 493 aa15.58■□□□□ 0.08
CDRT1-206ENST00000571263 RGPD2P0DJD1 1756 aa15.57■□□□□ 0.08
CDRT1-206ENST00000571263 HSP90AB1P08238 724 aaKnown RBP15.57■□□□□ 0.08
CDRT1-206ENST00000571263 MYH16Q9H6N6 1097 aa15.57■□□□□ 0.08
CDRT1-206ENST00000571263 SLFN5Q08AF3 891 aa15.56■□□□□ 0.08
CDRT1-206ENST00000571263 VPS72Q15906 364 aa15.56■□□□□ 0.08
CDRT1-206ENST00000571263 USP21Q9UK80 565 aa15.56■□□□□ 0.08
CDRT1-206ENST00000571263 LRP6O75581 1613 aa15.55■□□□□ 0.08
CDRT1-206ENST00000571263 MAP3K5Q99683 1374 aa15.55■□□□□ 0.08
CDRT1-206ENST00000571263 SPATA31A1Q5TZJ5 1347 aa15.55■□□□□ 0.08
CDRT1-206ENST00000571263 BARGINQ6ZT62 677 aa15.55■□□□□ 0.08
CDRT1-206ENST00000571263 IFNL2Q8IZJ0 200 aa15.55■□□□□ 0.08
CDRT1-206ENST00000571263 ZCRB1Q8TBF4 217 aaKnown RBP15.55■□□□□ 0.08
CDRT1-206ENST00000571263 NRAPQ86VF7 1730 aa15.54■□□□□ 0.08
CDRT1-206ENST00000571263 PARP4Q9UKK3 1724 aaKnown RBP15.54■□□□□ 0.08
CDRT1-206ENST00000571263 OVOS2A0A0G2JMS6 1433 aa15.54■□□□□ 0.08
CDRT1-206ENST00000571263 SPATA31A5Q5VU36 1347 aa15.54■□□□□ 0.08
CDRT1-206ENST00000571263 SPATA31A7Q8IWB4 1347 aa15.54■□□□□ 0.08
CDRT1-206ENST00000571263 GNAI1P63096 354 aa15.54■□□□□ 0.08
CDRT1-206ENST00000571263 ZNF530Q6P9A1 599 aaPredicted RBP15.54■□□□□ 0.08
CDRT1-206ENST00000571263 TRMT2AQ8IZ69 625 aaKnown RBP15.54■□□□□ 0.08
CDRT1-206ENST00000571263 BABAM1Q9NWV8 329 aa15.54■□□□□ 0.08
CDRT1-206ENST00000571263 BCL9LQ86UU0 1499 aa15.53■□□□□ 0.08
CDRT1-206ENST00000571263 IFT57Q9NWB7 429 aa15.53■□□□□ 0.08
CDRT1-206ENST00000571263 CCDC9Q9Y3X0 531 aaKnown RBP15.53■□□□□ 0.08
CDRT1-206ENST00000571263 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.52■□□□□ 0.08
CDRT1-206ENST00000571263 PCDH11XQ9BZA7 1347 aa15.52■□□□□ 0.08
CDRT1-206ENST00000571263 PCDH11YQ9BZA8 1340 aa15.52■□□□□ 0.08
CDRT1-206ENST00000571263 SENP3-EIF4A1A0A087X0R7 540 aa15.52■□□□□ 0.08
CDRT1-206ENST00000571263 EXOC5O00471 708 aa15.52■□□□□ 0.08
CDRT1-206ENST00000571263 CFAP44Q96MT7 982 aa15.52■□□□□ 0.08
CDRT1-206ENST00000571263 TRPC5Q9UL62 973 aaPredicted RBP15.52■□□□□ 0.08
CDRT1-206ENST00000571263 USP35Q9P2H5 1018 aa15.51■□□□□ 0.07
CDRT1-206ENST00000571263 MEGF6O75095 1541 aa15.51■□□□□ 0.07
CDRT1-206ENST00000571263 AFF2P51816 1311 aa15.5■□□□□ 0.07
CDRT1-206ENST00000571263 PHKG2P15735 406 aa15.5■□□□□ 0.07
CDRT1-206ENST00000571263 CDCA7LQ96GN5 454 aa15.5■□□□□ 0.07
CDRT1-206ENST00000571263 DCAF5Q96JK2 942 aa15.5■□□□□ 0.07
CDRT1-206ENST00000571263 DLG5Q8TDM6 1919 aa15.5■□□□□ 0.07
CDRT1-206ENST00000571263 DISP2A7MBM2 1401 aa15.5■□□□□ 0.07
CDRT1-206ENST00000571263 PKD1L3Q7Z443 1732 aa15.49■□□□□ 0.07
CDRT1-206ENST00000571263 CT47B1P0C2W7 299 aaPredicted RBP15.49■□□□□ 0.07
CDRT1-206ENST00000571263 NKX1-1Q15270 411 aaPredicted RBP15.49■□□□□ 0.07
CDRT1-206ENST00000571263 DUSP27Q5VZP5 1158 aa15.49■□□□□ 0.07
CDRT1-206ENST00000571263 ZNF772Q68DY9 489 aaPredicted RBP15.49■□□□□ 0.07
CDRT1-206ENST00000571263 CEMIPQ8WUJ3 1361 aa15.49■□□□□ 0.07
CDRT1-206ENST00000571263 ZNF853P0CG23 659 aa15.48■□□□□ 0.07
CDRT1-206ENST00000571263 TEFQ10587 303 aa15.48■□□□□ 0.07
CDRT1-206ENST00000571263 TAF7Q15545 349 aaPredicted RBP15.48■□□□□ 0.07
CDRT1-206ENST00000571263 IL17REQ8NFR9 667 aa15.48■□□□□ 0.07
CDRT1-206ENST00000571263 RNMTO43148 476 aaKnown RBP15.47■□□□□ 0.07
CDRT1-206ENST00000571263 DDB1Q16531 1140 aa15.47■□□□□ 0.07
CDRT1-206ENST00000571263 MCM10Q7L590 875 aa15.47■□□□□ 0.07
CDRT1-206ENST00000571263 GJD4Q96KN9 370 aaPredicted RBP15.47■□□□□ 0.07
CDRT1-206ENST00000571263 CHL1O00533 1208 aa15.46■□□□□ 0.07
CDRT1-206ENST00000571263 CYP27B1O15528 508 aa15.46■□□□□ 0.07
CDRT1-206ENST00000571263 DCTN1Q14203 1278 aa15.46■□□□□ 0.07
CDRT1-206ENST00000571263 CHMP4AQ9BY43 222 aa15.46■□□□□ 0.07
CDRT1-206ENST00000571263 ERVV-2B6SEH9 535 aa15.45■□□□□ 0.06
CDRT1-206ENST00000571263 MPRIPQ6WCQ1 1025 aa15.45■□□□□ 0.06
CDRT1-206ENST00000571263 ZNF428Q96B54 188 aa15.45■□□□□ 0.06
CDRT1-206ENST00000571263 QTRT2Q9H974 415 aaKnown RBP15.45■□□□□ 0.06
CDRT1-206ENST00000571263 SPINK5Q9NQ38 1064 aaPredicted RBP15.45■□□□□ 0.06
CDRT1-206ENST00000571263 LAS1LQ9Y4W2 734 aaKnown RBP15.45■□□□□ 0.06
CDRT1-206ENST00000571263 SOS1Q07889 1333 aaPredicted RBP15.44■□□□□ 0.06
CDRT1-206ENST00000571263 ATRNO75882 1429 aa15.44■□□□□ 0.06
CDRT1-206ENST00000571263 ONECUT3O60422 494 aaPredicted RBP15.44■□□□□ 0.06
CDRT1-206ENST00000571263 DDX54Q8TDD1 881 aaKnown RBP15.44■□□□□ 0.06
CDRT1-206ENST00000571263 THUMPD2Q9BTF0 503 aaKnown RBP15.44■□□□□ 0.06
CDRT1-206ENST00000571263 FANCIQ9NVI1 1328 aa15.43■□□□□ 0.06
CDRT1-206ENST00000571263 TNS2Q63HR2 1409 aa15.43■□□□□ 0.06
CDRT1-206ENST00000571263 LGR6Q9HBX8 967 aa15.43■□□□□ 0.06
CDRT1-206ENST00000571263 ADAMTS7Q9UKP4 1686 aa15.43■□□□□ 0.06
CDRT1-206ENST00000571263 WNK3Q9BYP7 1800 aa15.43■□□□□ 0.06
CDRT1-206ENST00000571263 SLC52A2Q9HAB3 445 aa15.42■□□□□ 0.06
CDRT1-206ENST00000571263 MBIPQ9NS73 344 aa15.42■□□□□ 0.06
CDRT1-206ENST00000571263 TSPYL4Q9UJ04 414 aa15.42■□□□□ 0.06
CDRT1-206ENST00000571263 CABP4P57796 275 aa15.41■□□□□ 0.06
CDRT1-206ENST00000571263 FAM98CQ17RN3 349 aaKnown RBP15.41■□□□□ 0.06
CDRT1-206ENST00000571263 RCAN3Q9UKA8 241 aa15.41■□□□□ 0.06
CDRT1-206ENST00000571263 LRRC37A3O60309 1634 aa15.41■□□□□ 0.06
CDRT1-206ENST00000571263 BTBD11A6QL63 1104 aa15.4■□□□□ 0.06
CDRT1-206ENST00000571263 TSR2Q969E8 191 aaKnown RBP15.4■□□□□ 0.06
CDRT1-206ENST00000571263 SCN11AQ9UI33 1791 aa15.39■□□□□ 0.05
CDRT1-206ENST00000571263 RBM6P78332 1123 aaKnown RBP15.39■□□□□ 0.05
CDRT1-206ENST00000571263 EXOSC9Q06265 439 aaKnown RBP15.39■□□□□ 0.05
CDRT1-206ENST00000571263 KDM6AO15550 1401 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms