RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 KCNQ2O43526 872 aa23.68■■□□□ 1.38
RPA1-203ENST00000571058 TATP17735 454 aaPredicted RBP23.67■■□□□ 1.38
RPA1-203ENST00000571058 ACSBG1Q96GR2 724 aa23.67■■□□□ 1.38
RPA1-203ENST00000571058 POLKQ9UBT6 870 aa23.67■■□□□ 1.38
RPA1-203ENST00000571058 KNSTRNQ9Y448 316 aa23.67■■□□□ 1.38
RPA1-203ENST00000571058 KIF7Q2M1P5 1343 aa23.66■■□□□ 1.38
RPA1-203ENST00000571058 TXNRD1Q16881 649 aa23.65■■□□□ 1.38
RPA1-203ENST00000571058 USHBP1Q8N6Y0 703 aa23.65■■□□□ 1.38
RPA1-203ENST00000571058 SHANK3Q9BYB0 1731 aa23.64■■□□□ 1.38
RPA1-203ENST00000571058 BTAF1O14981 1849 aa23.64■■□□□ 1.38
RPA1-203ENST00000571058 PROM2Q8N271 834 aa23.64■■□□□ 1.37
RPA1-203ENST00000571058 NCAPD2Q15021 1401 aa23.64■■□□□ 1.37
RPA1-203ENST00000571058 PCDH11XQ9BZA7 1347 aa23.62■■□□□ 1.37
RPA1-203ENST00000571058 PCDH11YQ9BZA8 1340 aa23.62■■□□□ 1.37
RPA1-203ENST00000571058 TNNT2P45379 298 aaPredicted RBP23.61■■□□□ 1.37
RPA1-203ENST00000571058 MORC1Q86VD1 984 aa23.6■■□□□ 1.37
RPA1-203ENST00000571058 PLEKHG2Q9H7P9 1386 aa23.6■■□□□ 1.37
RPA1-203ENST00000571058 DOT1LQ8TEK3 1739 aa23.59■■□□□ 1.37
RPA1-203ENST00000571058 STK32BQ9NY57 414 aa23.58■■□□□ 1.37
RPA1-203ENST00000571058 PKD1L3Q7Z443 1732 aa23.57■■□□□ 1.36
RPA1-203ENST00000571058 PRIM1P49642 420 aaKnown RBP23.57■■□□□ 1.36
RPA1-203ENST00000571058 SYTL4Q96C24 671 aaPredicted RBP23.57■■□□□ 1.36
RPA1-203ENST00000571058 EYA1Q99502 592 aa23.57■■□□□ 1.36
RPA1-203ENST00000571058 ANO8Q9HCE9 1232 aaPredicted RBP23.57■■□□□ 1.36
RPA1-203ENST00000571058 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.57■■□□□ 1.36
RPA1-203ENST00000571058 SLC27A3Q5K4L6 730 aa23.56■■□□□ 1.36
RPA1-203ENST00000571058 SPG7Q9UQ90 795 aa23.56■■□□□ 1.36
RPA1-203ENST00000571058 EIF4A2Q14240 407 aaKnown RBP23.55■■□□□ 1.36
RPA1-203ENST00000571058 AMER1Q5JTC6 1135 aaPredicted RBP23.55■■□□□ 1.36
RPA1-203ENST00000571058 SLC15A2Q16348 729 aa23.54■■□□□ 1.36
RPA1-203ENST00000571058 SPON1Q9HCB6 807 aa23.54■■□□□ 1.36
RPA1-203ENST00000571058 HMGB2P26583 209 aaKnown RBP23.52■■□□□ 1.36
RPA1-203ENST00000571058 PAPPAQ13219 1627 aa23.51■■□□□ 1.35
RPA1-203ENST00000571058 CASZ1Q86V15 1759 aa23.51■■□□□ 1.35
RPA1-203ENST00000571058 CYP27B1O15528 508 aa23.51■■□□□ 1.35
RPA1-203ENST00000571058 PER1O15534 1290 aaPredicted RBP23.51■■□□□ 1.35
RPA1-203ENST00000571058 IGSF1Q8N6C5 1336 aa23.51■■□□□ 1.35
RPA1-203ENST00000571058 LY75O60449 1722 aa23.5■■□□□ 1.35
RPA1-203ENST00000571058 NKX1-1Q15270 411 aaPredicted RBP23.49■■□□□ 1.35
RPA1-203ENST00000571058 NPC1L1Q9UHC9 1359 aa23.49■■□□□ 1.35
RPA1-203ENST00000571058 LRRC4BQ9NT99 713 aa23.48■■□□□ 1.35
RPA1-203ENST00000571058 IFNL2Q8IZJ0 200 aa23.46■■□□□ 1.35
RPA1-203ENST00000571058 ITGB4P16144 1822 aa23.43■■□□□ 1.34
RPA1-203ENST00000571058 SMARCC1Q92922 1105 aaPredicted RBP23.43■■□□□ 1.34
RPA1-203ENST00000571058 PPP1R1BQ9UD71 204 aaPredicted RBP23.43■■□□□ 1.34
RPA1-203ENST00000571058 CCNL1Q9UK58 526 aaPredicted RBP23.43■■□□□ 1.34
RPA1-203ENST00000571058 QSER1Q2KHR3 1735 aa23.42■■□□□ 1.34
RPA1-203ENST00000571058 TOGARAM1Q9Y4F4 1720 aa23.42■■□□□ 1.34
RPA1-203ENST00000571058 PHKG2P15735 406 aa23.42■■□□□ 1.34
RPA1-203ENST00000571058 AMOTQ4VCS5 1084 aa23.42■■□□□ 1.34
RPA1-203ENST00000571058 PLEKHO1Q53GL0 409 aaPredicted RBP23.42■■□□□ 1.34
RPA1-203ENST00000571058 MPRIPQ6WCQ1 1025 aa23.42■■□□□ 1.34
RPA1-203ENST00000571058 AKT1S1Q96B36 256 aa23.42■■□□□ 1.34
RPA1-203ENST00000571058 MTFR1LQ9H019 292 aa23.42■■□□□ 1.34
RPA1-203ENST00000571058 HSP90AB1P08238 724 aaKnown RBP23.41■■□□□ 1.34
RPA1-203ENST00000571058 CC2D1BQ5T0F9 858 aaKnown RBP23.41■■□□□ 1.34
RPA1-203ENST00000571058 IL13P35225 146 aa23.4■■□□□ 1.34
RPA1-203ENST00000571058 MTHFSP49914 203 aa23.4■■□□□ 1.34
RPA1-203ENST00000571058 ZNF827Q17R98 1081 aa23.4■■□□□ 1.34
RPA1-203ENST00000571058 PDGFDQ9GZP0 370 aaPredicted RBP23.4■■□□□ 1.34
RPA1-203ENST00000571058 KDRP35968 1356 aa23.4■■□□□ 1.34
RPA1-203ENST00000571058 PALLDQ8WX93 1383 aa23.4■■□□□ 1.34
RPA1-203ENST00000571058 ZBTB7AO95365 584 aa23.39■■□□□ 1.33
RPA1-203ENST00000571058 SLC16A10Q8TF71 515 aa23.38■■□□□ 1.33
RPA1-203ENST00000571058 TMOD3Q9NYL9 352 aa23.38■■□□□ 1.33
RPA1-203ENST00000571058 PIGBQ92521 554 aa23.37■■□□□ 1.33
RPA1-203ENST00000571058 TFCP2L1Q9NZI6 479 aa23.37■■□□□ 1.33
RPA1-203ENST00000571058 SULT6B1Q6IMI4 303 aa23.36■■□□□ 1.33
RPA1-203ENST00000571058 DCAF5Q96JK2 942 aa23.36■■□□□ 1.33
RPA1-203ENST00000571058 ERVV-2B6SEH9 535 aa23.35■■□□□ 1.33
RPA1-203ENST00000571058 PTGER2P43116 358 aa23.35■■□□□ 1.33
RPA1-203ENST00000571058 KCNQ4P56696 695 aa23.34■■□□□ 1.33
RPA1-203ENST00000571058 ZNF530Q6P9A1 599 aaPredicted RBP23.34■■□□□ 1.33
RPA1-203ENST00000571058 AEBP1Q8IUX7 1158 aa23.34■■□□□ 1.33
RPA1-203ENST00000571058 ATF5Q9Y2D1 282 aaPredicted RBP23.34■■□□□ 1.33
RPA1-203ENST00000571058 C5P01031 1676 aa23.34■■□□□ 1.33
RPA1-203ENST00000571058 DIAPH1O60610 1272 aaKnown RBP23.33■■□□□ 1.33
RPA1-203ENST00000571058 C1orf141Q5JVX7 400 aa23.33■■□□□ 1.33
RPA1-203ENST00000571058 PNPLA7Q6ZV29 1317 aa23.33■■□□□ 1.32
RPA1-203ENST00000571058 TAF1LQ8IZX4 1826 aa23.32■■□□□ 1.32
RPA1-203ENST00000571058 TUBGCP6Q96RT7 1819 aa23.31■■□□□ 1.32
RPA1-203ENST00000571058 FLAD1Q8NFF5 587 aa23.3■■□□□ 1.32
RPA1-203ENST00000571058 SGIP1Q9BQI5 828 aa23.3■■□□□ 1.32
RPA1-203ENST00000571058 LOC102724428A0A0B4J2F2 783 aa23.28■■□□□ 1.32
RPA1-203ENST00000571058 SIK1P57059 783 aa23.28■■□□□ 1.32
RPA1-203ENST00000571058 DCAF8L1A6NGE4 600 aa23.27■■□□□ 1.32
RPA1-203ENST00000571058 ASAP1Q9ULH1 1129 aa23.27■■□□□ 1.32
RPA1-203ENST00000571058 KDM6AO15550 1401 aaPredicted RBP23.26■■□□□ 1.31
RPA1-203ENST00000571058 C4BP0C0L5 1744 aa23.26■■□□□ 1.31
RPA1-203ENST00000571058 COL24A1Q17RW2 1714 aa23.26■■□□□ 1.31
RPA1-203ENST00000571058 POLD1P28340 1107 aa23.26■■□□□ 1.31
RPA1-203ENST00000571058 COL3A1P02461 1466 aaPredicted RBP23.25■■□□□ 1.31
RPA1-203ENST00000571058 CABP4P57796 275 aa23.25■■□□□ 1.31
RPA1-203ENST00000571058 AKAP4Q5JQC9 854 aa23.25■■□□□ 1.31
RPA1-203ENST00000571058 AK7Q96M32 723 aa23.25■■□□□ 1.31
RPA1-203ENST00000571058 CFAP53Q96M91 514 aa23.25■■□□□ 1.31
RPA1-203ENST00000571058 ARXQ96QS3 562 aa23.25■■□□□ 1.31
RPA1-203ENST00000571058 ATG3Q9NT62 314 aa23.25■■□□□ 1.31
RPA1-203ENST00000571058 CNGB1Q14028 1251 aaPredicted RBP23.24■■□□□ 1.31
RPA1-203ENST00000571058 ZNF831Q5JPB2 1677 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms