RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 NBPF6Q5VWK0 638 aa22.43■■□□□ 1.18
RPAIN-208ENST00000571043 NBPF4Q96M43 638 aa22.43■■□□□ 1.18
RPAIN-208ENST00000571043 NFE2L2Q16236 605 aa22.42■■□□□ 1.18
RPAIN-208ENST00000571043 MEX3CQ5U5Q3 659 aaKnown RBP22.42■■□□□ 1.18
RPAIN-208ENST00000571043 WDR17Q8IZU2 1322 aa22.42■■□□□ 1.18
RPAIN-208ENST00000571043 IGSF1Q8N6C5 1336 aa22.42■■□□□ 1.18
RPAIN-208ENST00000571043 HMOX1P09601 288 aa22.41■■□□□ 1.18
RPAIN-208ENST00000571043 FAM208AQ9UK61 1670 aaKnown RBP22.41■■□□□ 1.18
RPAIN-208ENST00000571043 STRN4Q9NRL3 753 aa22.41■■□□□ 1.18
RPAIN-208ENST00000571043 BCAR3O75815 825 aa22.4■■□□□ 1.18
RPAIN-208ENST00000571043 CSB-PGBD3P0DP91 1061 aa22.4■■□□□ 1.18
RPAIN-208ENST00000571043 C20orf194Q5TEA3 1177 aa22.4■■□□□ 1.18
RPAIN-208ENST00000571043 RARSP54136 660 aaKnown RBP22.39■■□□□ 1.17
RPAIN-208ENST00000571043 LARP1Q6PKG0 1096 aaKnown RBP22.39■■□□□ 1.17
RPAIN-208ENST00000571043 UNC5CLQ8IV45 518 aa22.39■■□□□ 1.17
RPAIN-208ENST00000571043 NRAPQ86VF7 1730 aa22.39■■□□□ 1.17
RPAIN-208ENST00000571043 BCL9LQ86UU0 1499 aa22.38■■□□□ 1.17
RPAIN-208ENST00000571043 FANCIQ9NVI1 1328 aa22.38■■□□□ 1.17
RPAIN-208ENST00000571043 SULT6B1Q6IMI4 303 aa22.38■■□□□ 1.17
RPAIN-208ENST00000571043 ILDR1Q86SU0 546 aaPredicted RBP22.38■■□□□ 1.17
RPAIN-208ENST00000571043 PHACTR3Q96KR7 559 aa22.38■■□□□ 1.17
RPAIN-208ENST00000571043 NLRP2Q9NX02 1062 aa22.38■■□□□ 1.17
RPAIN-208ENST00000571043 KDRP35968 1356 aa22.37■■□□□ 1.17
RPAIN-208ENST00000571043 CALD1Q05682 793 aaKnown RBP22.37■■□□□ 1.17
RPAIN-208ENST00000571043 PDE3AQ14432 1141 aa22.37■■□□□ 1.17
RPAIN-208ENST00000571043 TOM1L2Q6ZVM7 507 aa22.37■■□□□ 1.17
RPAIN-208ENST00000571043 NCAPD2Q15021 1401 aa22.37■■□□□ 1.17
RPAIN-208ENST00000571043 LMOD3Q0VAK6 560 aa22.36■■□□□ 1.17
RPAIN-208ENST00000571043 CARD10Q9BWT7 1032 aa22.36■■□□□ 1.17
RPAIN-208ENST00000571043 AEBP1Q8IUX7 1158 aa22.36■■□□□ 1.17
RPAIN-208ENST00000571043 USP21Q9UK80 565 aa22.36■■□□□ 1.17
RPAIN-208ENST00000571043 CRB1P82279 1406 aa22.35■■□□□ 1.17
RPAIN-208ENST00000571043 AFF2P51816 1311 aa22.34■■□□□ 1.17
RPAIN-208ENST00000571043 USHBP1Q8N6Y0 703 aa22.34■■□□□ 1.17
RPAIN-208ENST00000571043 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.34■■□□□ 1.17
RPAIN-208ENST00000571043 VPS72Q15906 364 aa22.31■■□□□ 1.16
RPAIN-208ENST00000571043 TSR2Q969E8 191 aaKnown RBP22.31■■□□□ 1.16
RPAIN-208ENST00000571043 EXOSC9Q06265 439 aaKnown RBP22.31■■□□□ 1.16
RPAIN-208ENST00000571043 SPATA31A1Q5TZJ5 1347 aa22.3■■□□□ 1.16
RPAIN-208ENST00000571043 SPATA31A5Q5VU36 1347 aa22.3■■□□□ 1.16
RPAIN-208ENST00000571043 SPATA31A7Q8IWB4 1347 aa22.3■■□□□ 1.16
RPAIN-208ENST00000571043 CANXP27824 592 aaKnown RBP22.3■■□□□ 1.16
RPAIN-208ENST00000571043 IFT57Q9NWB7 429 aa22.29■■□□□ 1.16
RPAIN-208ENST00000571043 USP35Q9P2H5 1018 aa22.28■■□□□ 1.16
RPAIN-208ENST00000571043 THRAP3Q9Y2W1 955 aaKnown RBP22.28■■□□□ 1.16
RPAIN-208ENST00000571043 GNAI1P63096 354 aa22.27■■□□□ 1.16
RPAIN-208ENST00000571043 ZNF853P0CG23 659 aa22.26■■□□□ 1.15
RPAIN-208ENST00000571043 RAPGEF4Q8WZA2 1011 aa22.26■■□□□ 1.15
RPAIN-208ENST00000571043 AAMPQ13685 434 aa22.26■■□□□ 1.15
RPAIN-208ENST00000571043 ZNF428Q96B54 188 aa22.26■■□□□ 1.15
RPAIN-208ENST00000571043 TRPC5Q9UL62 973 aaPredicted RBP22.26■■□□□ 1.15
RPAIN-208ENST00000571043 IL2RBP14784 551 aa22.25■■□□□ 1.15
RPAIN-208ENST00000571043 CCDC9Q9Y3X0 531 aaKnown RBP22.25■■□□□ 1.15
RPAIN-208ENST00000571043 PLEKHG2Q9H7P9 1386 aa22.24■■□□□ 1.15
RPAIN-208ENST00000571043 ATRNO75882 1429 aa22.24■■□□□ 1.15
RPAIN-208ENST00000571043 TATP17735 454 aaPredicted RBP22.24■■□□□ 1.15
RPAIN-208ENST00000571043 ZNF772Q68DY9 489 aaPredicted RBP22.24■■□□□ 1.15
RPAIN-208ENST00000571043 BARGINQ6ZT62 677 aa22.24■■□□□ 1.15
RPAIN-208ENST00000571043 FRAT1Q92837 279 aaPredicted RBP22.24■■□□□ 1.15
RPAIN-208ENST00000571043 QTRT2Q9H974 415 aaKnown RBP22.24■■□□□ 1.15
RPAIN-208ENST00000571043 MS4A1P11836 297 aa22.23■■□□□ 1.15
RPAIN-208ENST00000571043 GJD4Q96KN9 370 aaPredicted RBP22.23■■□□□ 1.15
RPAIN-208ENST00000571043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.23■■□□□ 1.152e-8■□□□□ 9.4
RPAIN-208ENST00000571043 ALDH1L2Q3SY69 923 aa22.22■■□□□ 1.15
RPAIN-208ENST00000571043 CFAP44Q96MT7 982 aa22.22■■□□□ 1.15
RPAIN-208ENST00000571043 RBM19Q9Y4C8 960 aaKnown RBP22.22■■□□□ 1.15
RPAIN-208ENST00000571043 MEGF6O75095 1541 aa22.22■■□□□ 1.15
RPAIN-208ENST00000571043 AMOTQ4VCS5 1084 aa22.21■■□□□ 1.15
RPAIN-208ENST00000571043 PLEKHO1Q53GL0 409 aaPredicted RBP22.21■■□□□ 1.15
RPAIN-208ENST00000571043 ZKSCAN2Q63HK3 967 aa22.21■■□□□ 1.15
RPAIN-208ENST00000571043 CENPQQ7L2Z9 268 aaPredicted RBP22.21■■□□□ 1.15
RPAIN-208ENST00000571043 CDCA7Q9BWT1 371 aaPredicted RBP22.21■■□□□ 1.15
RPAIN-208ENST00000571043 KDM2BQ8NHM5 1336 aa22.21■■□□□ 1.15
RPAIN-208ENST00000571043 DISP2A7MBM2 1401 aa22.21■■□□□ 1.15
RPAIN-208ENST00000571043 MTHFSDQ2M296 383 aaKnown RBP22.21■■□□□ 1.15
RPAIN-208ENST00000571043 THUMPD2Q9BTF0 503 aaKnown RBP22.21■■□□□ 1.15
RPAIN-208ENST00000571043 SMC4Q9NTJ3 1288 aa22.21■■□□□ 1.15
RPAIN-208ENST00000571043 PANK1Q8TE04 598 aa22.2■■□□□ 1.14
RPAIN-208ENST00000571043 SSH1Q8WYL5 1049 aa22.2■■□□□ 1.14
RPAIN-208ENST00000571043 BCL2L13Q9BXK5 485 aa22.2■■□□□ 1.14
RPAIN-208ENST00000571043 PARP4Q9UKK3 1724 aaKnown RBP22.2■■□□□ 1.14
RPAIN-208ENST00000571043 OVOS2A0A0G2JMS6 1433 aa22.19■■□□□ 1.14
RPAIN-208ENST00000571043 WNK3Q9BYP7 1800 aa22.19■■□□□ 1.14
RPAIN-208ENST00000571043 BRPF1P55201 1214 aaPredicted RBP22.19■■□□□ 1.14
RPAIN-208ENST00000571043 RGS17Q9UGC6 210 aaPredicted RBP22.19■■□□□ 1.14
RPAIN-208ENST00000571043 LAS1LQ9Y4W2 734 aaKnown RBP22.19■■□□□ 1.14
RPAIN-208ENST00000571043 GAS2L2Q8NHY3 880 aa22.18■■□□□ 1.14
RPAIN-208ENST00000571043 COG6Q9Y2V7 657 aa22.18■■□□□ 1.14
RPAIN-208ENST00000571043 DLG5Q8TDM6 1919 aa22.18■■□□□ 1.14
RPAIN-208ENST00000571043 TCERG1O14776 1098 aaKnown RBP22.17■■□□□ 1.14
RPAIN-208ENST00000571043 ONECUT3O60422 494 aaPredicted RBP22.17■■□□□ 1.14
RPAIN-208ENST00000571043 GLI3P10071 1580 aa22.17■■□□□ 1.14
RPAIN-208ENST00000571043 MBIPQ9NS73 344 aa22.17■■□□□ 1.14
RPAIN-208ENST00000571043 SPG7Q9UQ90 795 aa22.17■■□□□ 1.14
RPAIN-208ENST00000571043 PKD1L3Q7Z443 1732 aa22.17■■□□□ 1.14
RPAIN-208ENST00000571043 KIF16BQ96L93 1317 aa22.16■■□□□ 1.14
RPAIN-208ENST00000571043 ZCRB1Q8TBF4 217 aaKnown RBP22.16■■□□□ 1.14
RPAIN-208ENST00000571043 CLUAP1Q96AJ1 413 aa22.16■■□□□ 1.14
RPAIN-208ENST00000571043 FAM98CQ17RN3 349 aaKnown RBP22.16■■□□□ 1.14
RPAIN-208ENST00000571043 IPO8O15397 1037 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms