RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 TNNT2P45379 298 aaPredicted RBP17.34■□□□□ 0.37
TVP23B-204ENST00000571018 EN1Q05925 392 aaPredicted RBP17.34■□□□□ 0.37
TVP23B-204ENST00000571018 AMER1Q5JTC6 1135 aaPredicted RBP17.34■□□□□ 0.37
TVP23B-204ENST00000571018 APBA3O96018 575 aa17.33■□□□□ 0.36
TVP23B-204ENST00000571018 MORC1Q86VD1 984 aa17.33■□□□□ 0.36
TVP23B-204ENST00000571018 MAP2P11137 1827 aaKnown RBP17.33■□□□□ 0.36
TVP23B-204ENST00000571018 RGPD2P0DJD1 1756 aa17.32■□□□□ 0.36
TVP23B-204ENST00000571018 CAMKK2Q96RR4 588 aa17.31■□□□□ 0.36
TVP23B-204ENST00000571018 EZH2Q15910 746 aaKnown RBP17.3■□□□□ 0.36
TVP23B-204ENST00000571018 USHBP1Q8N6Y0 703 aa17.3■□□□□ 0.36
TVP23B-204ENST00000571018 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
TVP23B-204ENST00000571018 ATF5Q9Y2D1 282 aaPredicted RBP17.3■□□□□ 0.36
TVP23B-204ENST00000571018 PARD3Q8TEW0 1356 aa17.29■□□□□ 0.36
TVP23B-204ENST00000571018 RAPGEF4Q8WZA2 1011 aa17.29■□□□□ 0.36
TVP23B-204ENST00000571018 MEGF6O75095 1541 aa17.29■□□□□ 0.36
TVP23B-204ENST00000571018 SBF2Q86WG5 1849 aa17.28■□□□□ 0.36
TVP23B-204ENST00000571018 ZCRB1Q8TBF4 217 aaKnown RBP17.28■□□□□ 0.36
TVP23B-204ENST00000571018 NCAPD2Q15021 1401 aa17.28■□□□□ 0.36
TVP23B-204ENST00000571018 NPC1L1Q9UHC9 1359 aa17.28■□□□□ 0.36
TVP23B-204ENST00000571018 TATP17735 454 aaPredicted RBP17.27■□□□□ 0.36
TVP23B-204ENST00000571018 PTF1AQ7RTS3 328 aa17.27■□□□□ 0.36
TVP23B-204ENST00000571018 DDX54Q8TDD1 881 aaKnown RBP17.27■□□□□ 0.36
TVP23B-204ENST00000571018 EYA1Q99502 592 aa17.27■□□□□ 0.36
TVP23B-204ENST00000571018 PLSCR1O15162 318 aa17.26■□□□□ 0.35
TVP23B-204ENST00000571018 EIF4A2Q14240 407 aaKnown RBP17.26■□□□□ 0.35
TVP23B-204ENST00000571018 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
TVP23B-204ENST00000571018 CC2D1BQ5T0F9 858 aaKnown RBP17.25■□□□□ 0.35
TVP23B-204ENST00000571018 KCNQ2O43526 872 aa17.24■□□□□ 0.35
TVP23B-204ENST00000571018 ACSBG1Q96GR2 724 aa17.23■□□□□ 0.35
TVP23B-204ENST00000571018 SHANK3Q9BYB0 1731 aa17.22■□□□□ 0.35
TVP23B-204ENST00000571018 NHSQ6T4R5 1651 aa17.22■□□□□ 0.35
TVP23B-204ENST00000571018 IGSF1Q8N6C5 1336 aa17.21■□□□□ 0.35
TVP23B-204ENST00000571018 MTHFSP49914 203 aa17.21■□□□□ 0.35
TVP23B-204ENST00000571018 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.34
TVP23B-204ENST00000571018 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.34
TVP23B-204ENST00000571018 RGPD3A6NKT7 1758 aaPredicted RBP17.2■□□□□ 0.34
TVP23B-204ENST00000571018 RGPD4Q7Z3J3 1758 aa17.2■□□□□ 0.34
TVP23B-204ENST00000571018 RREB1Q92766 1687 aa17.2■□□□□ 0.34
TVP23B-204ENST00000571018 CACNB1Q02641 598 aaPredicted RBP17.2■□□□□ 0.34
TVP23B-204ENST00000571018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.2■□□□□ 0.34
TVP23B-204ENST00000571018 PROM2Q8N271 834 aa17.19■□□□□ 0.34
TVP23B-204ENST00000571018 SPG7Q9UQ90 795 aa17.19■□□□□ 0.34
TVP23B-204ENST00000571018 PLEKHG2Q9H7P9 1386 aa17.18■□□□□ 0.34
TVP23B-204ENST00000571018 CYP27B1O15528 508 aa17.18■□□□□ 0.34
TVP23B-204ENST00000571018 IL13P35225 146 aa17.18■□□□□ 0.34
TVP23B-204ENST00000571018 PSDA5PKW4 1024 aaPredicted RBP17.17■□□□□ 0.34
TVP23B-204ENST00000571018 CAPN15O75808 1086 aa17.17■□□□□ 0.34
TVP23B-204ENST00000571018 PRIM1P49642 420 aaKnown RBP17.17■□□□□ 0.34
TVP23B-204ENST00000571018 CNGB1Q14028 1251 aaPredicted RBP17.17■□□□□ 0.34
TVP23B-204ENST00000571018 TXNRD1Q16881 649 aa17.17■□□□□ 0.34
TVP23B-204ENST00000571018 NUP188Q5SRE5 1749 aa17.17■□□□□ 0.34
TVP23B-204ENST00000571018 NBPF14Q5TI25 921 aa17.17■□□□□ 0.34
TVP23B-204ENST00000571018 PKD1L3Q7Z443 1732 aa17.17■□□□□ 0.34
TVP23B-204ENST00000571018 R3HDM1Q15032 1099 aaKnown RBP17.16■□□□□ 0.34
TVP23B-204ENST00000571018 SYTL4Q96C24 671 aaPredicted RBP17.15■□□□□ 0.34
TVP23B-204ENST00000571018 BTAF1O14981 1849 aa17.14■□□□□ 0.34
TVP23B-204ENST00000571018 DOT1LQ8TEK3 1739 aa17.14■□□□□ 0.33
TVP23B-204ENST00000571018 ZEB1P37275 1124 aaPredicted RBP17.14■□□□□ 0.33
TVP23B-204ENST00000571018 NKX1-1Q15270 411 aaPredicted RBP17.14■□□□□ 0.33
TVP23B-204ENST00000571018 ZNF219Q9P2Y4 722 aaPredicted RBP17.14■□□□□ 0.33
TVP23B-204ENST00000571018 SULT6B1Q6IMI4 303 aa17.13■□□□□ 0.33
TVP23B-204ENST00000571018 AEBP1Q8IUX7 1158 aa17.13■□□□□ 0.33
TVP23B-204ENST00000571018 KDRP35968 1356 aa17.13■□□□□ 0.33
TVP23B-204ENST00000571018 DIAPH1O60610 1272 aaKnown RBP17.12■□□□□ 0.33
TVP23B-204ENST00000571018 PHKG2P15735 406 aa17.12■□□□□ 0.33
TVP23B-204ENST00000571018 IFNL2Q8IZJ0 200 aa17.12■□□□□ 0.33
TVP23B-204ENST00000571018 PLEKHO1Q53GL0 409 aaPredicted RBP17.11■□□□□ 0.33
TVP23B-204ENST00000571018 AMOTQ4VCS5 1084 aa17.1■□□□□ 0.33
TVP23B-204ENST00000571018 ANO8Q9HCE9 1232 aaPredicted RBP17.1■□□□□ 0.33
TVP23B-204ENST00000571018 KAT6BQ8WYB5 2073 aa17.09■□□□□ 0.33
TVP23B-204ENST00000571018 COL3A1P02461 1466 aaPredicted RBP17.09■□□□□ 0.33
TVP23B-204ENST00000571018 PPP2R1AP30153 589 aa17.08■□□□□ 0.32
TVP23B-204ENST00000571018 SLC27A3Q5K4L6 730 aa17.08■□□□□ 0.32
TVP23B-204ENST00000571018 MPRIPQ6WCQ1 1025 aa17.08■□□□□ 0.32
TVP23B-204ENST00000571018 LRRC4BQ9NT99 713 aa17.08■□□□□ 0.32
TVP23B-204ENST00000571018 TOGARAM1Q9Y4F4 1720 aa17.07■□□□□ 0.32
TVP23B-204ENST00000571018 HSP90AB1P08238 724 aaKnown RBP17.06■□□□□ 0.32
TVP23B-204ENST00000571018 HMOX1P09601 288 aa17.06■□□□□ 0.32
TVP23B-204ENST00000571018 SLC15A2Q16348 729 aa17.06■□□□□ 0.32
TVP23B-204ENST00000571018 ZNF530Q6P9A1 599 aaPredicted RBP17.06■□□□□ 0.32
TVP23B-204ENST00000571018 CFAP53Q96M91 514 aa17.06■□□□□ 0.32
TVP23B-204ENST00000571018 STK32BQ9NY57 414 aa17.06■□□□□ 0.32
TVP23B-204ENST00000571018 DDX10Q13206 875 aaKnown RBP17.05■□□□□ 0.32
TVP23B-204ENST00000571018 PIGBQ92521 554 aa17.05■□□□□ 0.32
TVP23B-204ENST00000571018 DCAF5Q96JK2 942 aa17.05■□□□□ 0.32
TVP23B-204ENST00000571018 LY75O60449 1722 aa17.04■□□□□ 0.32
TVP23B-204ENST00000571018 PAPPAQ13219 1627 aa17.04■□□□□ 0.32
TVP23B-204ENST00000571018 ITGB4P16144 1822 aa17.03■□□□□ 0.32
TVP23B-204ENST00000571018 ERVV-2B6SEH9 535 aa17.03■□□□□ 0.32
TVP23B-204ENST00000571018 U2SURPO15042 1029 aaKnown RBP17.03■□□□□ 0.32
TVP23B-204ENST00000571018 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
TVP23B-204ENST00000571018 SMARCC1Q92922 1105 aaPredicted RBP17.03■□□□□ 0.32
TVP23B-204ENST00000571018 TMOD3Q9NYL9 352 aa17.03■□□□□ 0.32
TVP23B-204ENST00000571018 CCNL1Q9UK58 526 aaPredicted RBP17.03■□□□□ 0.32
TVP23B-204ENST00000571018 LRP5O75197 1615 aa17.03■□□□□ 0.32
TVP23B-204ENST00000571018 PALLDQ8WX93 1383 aa17.02■□□□□ 0.32
TVP23B-204ENST00000571018 KCNQ4P56696 695 aa17.02■□□□□ 0.32
TVP23B-204ENST00000571018 ZNF827Q17R98 1081 aa17.01■□□□□ 0.31
TVP23B-204ENST00000571018 AKT1S1Q96B36 256 aa17.01■□□□□ 0.31
TVP23B-204ENST00000571018 NUDCQ9Y266 331 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms