RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 EYA1Q99502 592 aa15.19■□□□□ 0.02
SMG6-206ENST00000570668 SRCAPQ6ZRS2 3230 aa15.19■□□□□ 0.02
SMG6-206ENST00000570668 TATP17735 454 aaPredicted RBP15.18■□□□□ 0.02
SMG6-206ENST00000570668 CC2D1BQ5T0F9 858 aaKnown RBP15.17■□□□□ 0.02
SMG6-206ENST00000570668 SHANK3Q9BYB0 1731 aa15.17■□□□□ 0.02
SMG6-206ENST00000570668 KCNQ2O43526 872 aa15.16■□□□□ 0.02
SMG6-206ENST00000570668 KAT6BQ8WYB5 2073 aa15.16■□□□□ 0.02
SMG6-206ENST00000570668 RGPD3A6NKT7 1758 aaPredicted RBP15.16■□□□□ 0.02
SMG6-206ENST00000570668 RGPD4Q7Z3J3 1758 aa15.16■□□□□ 0.02
SMG6-206ENST00000570668 NHSQ6T4R5 1651 aa15.16■□□□□ 0.02
SMG6-206ENST00000570668 ACSBG1Q96GR2 724 aa15.15■□□□□ 0.02
SMG6-206ENST00000570668 RREB1Q92766 1687 aa15.15■□□□□ 0.02
SMG6-206ENST00000570668 IGSF1Q8N6C5 1336 aa15.15■□□□□ 0.02
SMG6-206ENST00000570668 MTHFSP49914 203 aa15.13■□□□□ 0.01
SMG6-206ENST00000570668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.13■□□□□ 0.01
SMG6-206ENST00000570668 PCDH11XQ9BZA7 1347 aa15.13■□□□□ 0.01
SMG6-206ENST00000570668 PCDH11YQ9BZA8 1340 aa15.13■□□□□ 0.01
SMG6-206ENST00000570668 PLEKHG2Q9H7P9 1386 aa15.12■□□□□ 0.01
SMG6-206ENST00000570668 PROM2Q8N271 834 aa15.12■□□□□ 0.01
SMG6-206ENST00000570668 NUP188Q5SRE5 1749 aa15.12■□□□□ 0.01
SMG6-206ENST00000570668 PKD1L3Q7Z443 1732 aa15.12■□□□□ 0.01
SMG6-206ENST00000570668 CYP27B1O15528 508 aa15.11■□□□□ 0.01
SMG6-206ENST00000570668 IL13P35225 146 aa15.11■□□□□ 0.01
SMG6-206ENST00000570668 SPG7Q9UQ90 795 aa15.11■□□□□ 0.01
SMG6-206ENST00000570668 BTAF1O14981 1849 aa15.1■□□□□ 0.01
SMG6-206ENST00000570668 PRIM1P49642 420 aaKnown RBP15.1■□□□□ 0.01
SMG6-206ENST00000570668 TXNRD1Q16881 649 aa15.1■□□□□ 0.01
SMG6-206ENST00000570668 PSDA5PKW4 1024 aaPredicted RBP15.09■□□□□ 0.01
SMG6-206ENST00000570668 CNGB1Q14028 1251 aaPredicted RBP15.09■□□□□ 0.01
SMG6-206ENST00000570668 R3HDM1Q15032 1099 aaKnown RBP15.09■□□□□ 0.01
SMG6-206ENST00000570668 NBPF14Q5TI25 921 aa15.09■□□□□ 0.01
SMG6-206ENST00000570668 DOT1LQ8TEK3 1739 aa15.09■□□□□ 0.01
SMG6-206ENST00000570668 ZEB1P37275 1124 aaPredicted RBP15.08■□□□□ 0
SMG6-206ENST00000570668 NKX1-1Q15270 411 aaPredicted RBP15.08■□□□□ 0
SMG6-206ENST00000570668 SYTL4Q96C24 671 aaPredicted RBP15.08■□□□□ 0
SMG6-206ENST00000570668 KDRP35968 1356 aa15.08■□□□□ 0
SMG6-206ENST00000570668 AEBP1Q8IUX7 1158 aa15.07■□□□□ 0
SMG6-206ENST00000570668 DIAPH1O60610 1272 aaKnown RBP15.06■□□□□ 0
SMG6-206ENST00000570668 PHKG2P15735 406 aa15.06■□□□□ 0
SMG6-206ENST00000570668 SULT6B1Q6IMI4 303 aa15.06■□□□□ 0
SMG6-206ENST00000570668 IFNL2Q8IZJ0 200 aa15.06■□□□□ 0
SMG6-206ENST00000570668 AMOTQ4VCS5 1084 aa15.05■□□□□ -0
SMG6-206ENST00000570668 PLEKHO1Q53GL0 409 aaPredicted RBP15.05■□□□□ -0
SMG6-206ENST00000570668 ANO8Q9HCE9 1232 aaPredicted RBP15.05■□□□□ -0
SMG6-206ENST00000570668 COL3A1P02461 1466 aaPredicted RBP15.04■□□□□ -0
SMG6-206ENST00000570668 ADRA2BP18089 450 aa15.03■□□□□ -0
SMG6-206ENST00000570668 SLC27A3Q5K4L6 730 aa15.03■□□□□ -0
SMG6-206ENST00000570668 TOGARAM1Q9Y4F4 1720 aa15.03■□□□□ -0
SMG6-206ENST00000570668 PPP2R1AP30153 589 aa15.02■□□□□ -0
SMG6-206ENST00000570668 MPRIPQ6WCQ1 1025 aa15.02■□□□□ -0
SMG6-206ENST00000570668 LRRC4BQ9NT99 713 aa15.02■□□□□ -0
SMG6-206ENST00000570668 ITGB4P16144 1822 aa15.01□□□□□ -0.01
SMG6-206ENST00000570668 HSP90AB1P08238 724 aaKnown RBP15.01□□□□□ -0.01
SMG6-206ENST00000570668 STK32BQ9NY57 414 aa15.01□□□□□ -0.01
SMG6-206ENST00000570668 LY75O60449 1722 aa15□□□□□ -0.01
SMG6-206ENST00000570668 PAPPAQ13219 1627 aa15□□□□□ -0.01
SMG6-206ENST00000570668 HMOX1P09601 288 aa15□□□□□ -0.01
SMG6-206ENST00000570668 SLC15A2Q16348 729 aa15□□□□□ -0.01
SMG6-206ENST00000570668 ZNF530Q6P9A1 599 aaPredicted RBP15□□□□□ -0.01
SMG6-206ENST00000570668 PIGBQ92521 554 aa15□□□□□ -0.01
SMG6-206ENST00000570668 DCAF5Q96JK2 942 aa15□□□□□ -0.01
SMG6-206ENST00000570668 CFAP53Q96M91 514 aa15□□□□□ -0.01
SMG6-206ENST00000570668 DDX10Q13206 875 aaKnown RBP14.99□□□□□ -0.01
SMG6-206ENST00000570668 LRP5O75197 1615 aa14.99□□□□□ -0.01
SMG6-206ENST00000570668 ERVV-2B6SEH9 535 aa14.98□□□□□ -0.01
SMG6-206ENST00000570668 U2SURPO15042 1029 aaKnown RBP14.98□□□□□ -0.01
SMG6-206ENST00000570668 SMARCC1Q92922 1105 aaPredicted RBP14.98□□□□□ -0.01
SMG6-206ENST00000570668 TMOD3Q9NYL9 352 aa14.98□□□□□ -0.01
SMG6-206ENST00000570668 PALLDQ8WX93 1383 aa14.98□□□□□ -0.01
SMG6-206ENST00000570668 C1orf141Q5JVX7 400 aa14.97□□□□□ -0.01
SMG6-206ENST00000570668 CCNL1Q9UK58 526 aaPredicted RBP14.97□□□□□ -0.01
SMG6-206ENST00000570668 KDM6AO15550 1401 aaPredicted RBP14.97□□□□□ -0.01
SMG6-206ENST00000570668 KCNQ4P56696 695 aa14.96□□□□□ -0.01
SMG6-206ENST00000570668 ZNF827Q17R98 1081 aa14.96□□□□□ -0.01
SMG6-206ENST00000570668 AKT1S1Q96B36 256 aa14.96□□□□□ -0.01
SMG6-206ENST00000570668 NUDCQ9Y266 331 aa14.96□□□□□ -0.01
SMG6-206ENST00000570668 HMGB2P26583 209 aaKnown RBP14.95□□□□□ -0.02
SMG6-206ENST00000570668 AKAP4Q5JQC9 854 aa14.95□□□□□ -0.02
SMG6-206ENST00000570668 PDGFDQ9GZP0 370 aaPredicted RBP14.95□□□□□ -0.02
SMG6-206ENST00000570668 CASZ1Q86V15 1759 aa14.95□□□□□ -0.02
SMG6-206ENST00000570668 RALBP1Q15311 655 aa14.94□□□□□ -0.02
SMG6-206ENST00000570668 MTHFSDQ2M296 383 aaKnown RBP14.94□□□□□ -0.02
SMG6-206ENST00000570668 ASAP1Q9ULH1 1129 aa14.94□□□□□ -0.02
SMG6-206ENST00000570668 CABP4P57796 275 aa14.93□□□□□ -0.02
SMG6-206ENST00000570668 SPON1Q9HCB6 807 aa14.93□□□□□ -0.02
SMG6-206ENST00000570668 ATG3Q9NT62 314 aa14.93□□□□□ -0.02
SMG6-206ENST00000570668 LOC102724428A0A0B4J2F2 783 aa14.92□□□□□ -0.02
SMG6-206ENST00000570668 SIK1P57059 783 aa14.92□□□□□ -0.02
SMG6-206ENST00000570668 RSPH6AQ9H0K4 717 aa14.92□□□□□ -0.02
SMG6-206ENST00000570668 SCN11AQ9UI33 1791 aa14.91□□□□□ -0.02
SMG6-206ENST00000570668 U2AF1L5P0DN76 240 aaPredicted RBP14.91□□□□□ -0.02
SMG6-206ENST00000570668 U2AF1Q01081 240 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMG6-206ENST00000570668 C5P01031 1676 aa14.9□□□□□ -0.02
SMG6-206ENST00000570668 TAF1LQ8IZX4 1826 aa14.9□□□□□ -0.02
SMG6-206ENST00000570668 QSER1Q2KHR3 1735 aa14.9□□□□□ -0.02
SMG6-206ENST00000570668 FCHSD2O94868 740 aa14.9□□□□□ -0.02
SMG6-206ENST00000570668 ZBTB7AO95365 584 aa14.9□□□□□ -0.02
SMG6-206ENST00000570668 PRKAR2BP31323 418 aa14.9□□□□□ -0.02
SMG6-206ENST00000570668 NFATC2IPQ8NCF5 419 aa14.9□□□□□ -0.02
SMG6-206ENST00000570668 GAS2L2Q8NHY3 880 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms