RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 LIMD1Q9UGP4 676 aa10.25□□□□□ -0.77
TCF4-246ENST00000570287 GLI2P10070 1586 aa10.25□□□□□ -0.77
TCF4-246ENST00000570287 PHLDB3Q6NSJ2 640 aa10.25□□□□□ -0.77
TCF4-246ENST00000570287 FRAT1Q92837 279 aaPredicted RBP10.25□□□□□ -0.77
TCF4-246ENST00000570287 SIGLEC1Q9BZZ2 1709 aa10.25□□□□□ -0.77
TCF4-246ENST00000570287 RAB11FIP3O75154 756 aa10.24□□□□□ -0.77
TCF4-246ENST00000570287 NFKBIBQ15653 356 aa10.24□□□□□ -0.77
TCF4-246ENST00000570287 MICAL1Q8TDZ2 1067 aa10.24□□□□□ -0.77
TCF4-246ENST00000570287 DDX12PQ92771 950 aa10.24□□□□□ -0.77
TCF4-246ENST00000570287 CDCA7LQ96GN5 454 aa10.24□□□□□ -0.77
TCF4-246ENST00000570287 UCN2Q96RP3 112 aa10.24□□□□□ -0.77
TCF4-246ENST00000570287 ZC3H4Q9UPT8 1303 aaKnown RBP10.24□□□□□ -0.77
TCF4-246ENST00000570287 CLK2P49760 499 aaKnown RBP10.24□□□□□ -0.77
TCF4-246ENST00000570287 SLC52A1Q9NWF4 448 aa10.23□□□□□ -0.77
TCF4-246ENST00000570287 QRICH2Q9H0J4 1663 aa10.23□□□□□ -0.77
TCF4-246ENST00000570287 LOC102724159A0A0B4J2E5 919 aa10.23□□□□□ -0.77
TCF4-246ENST00000570287 PWP2Q15269 919 aaKnown RBP10.23□□□□□ -0.77
TCF4-246ENST00000570287 DNAJC2Q99543 621 aaKnown RBP10.23□□□□□ -0.77
TCF4-246ENST00000570287 CLEC11AQ9Y240 323 aa10.23□□□□□ -0.77
TCF4-246ENST00000570287 DSG2Q14126 1118 aa10.22□□□□□ -0.77
TCF4-246ENST00000570287 C9orf131Q5VYM1 1079 aa10.22□□□□□ -0.77
TCF4-246ENST00000570287 GPATCH3Q96I76 525 aa10.22□□□□□ -0.77
TCF4-246ENST00000570287 GNEQ9Y223 722 aaKnown RBP10.22□□□□□ -0.77
TCF4-246ENST00000570287 NEXMIFQ5QGS0 1516 aa10.22□□□□□ -0.77
TCF4-246ENST00000570287 CARD14Q9BXL6 1004 aa10.22□□□□□ -0.77
TCF4-246ENST00000570287 DPH6Q7L8W6 267 aa10.21□□□□□ -0.77
TCF4-246ENST00000570287 VTI1AQ96AJ9 217 aa10.21□□□□□ -0.77
TCF4-246ENST00000570287 GPCPD1Q9NPB8 672 aa10.21□□□□□ -0.77
TCF4-246ENST00000570287 TRAK1Q9UPV9 953 aa10.21□□□□□ -0.77
TCF4-246ENST00000570287 FCHSD2O94868 740 aa10.21□□□□□ -0.78
TCF4-246ENST00000570287 RECKO95980 971 aa10.21□□□□□ -0.78
TCF4-246ENST00000570287 ZNF521Q96K83 1311 aa10.21□□□□□ -0.78
TCF4-246ENST00000570287 ZFYVE9O95405 1425 aa10.2□□□□□ -0.78
TCF4-246ENST00000570287 PTGDRQ13258 359 aa10.2□□□□□ -0.78
TCF4-246ENST00000570287 CSPP1Q1MSJ5 1256 aa10.2□□□□□ -0.78
TCF4-246ENST00000570287 UBXN4Q92575 508 aa10.2□□□□□ -0.78
TCF4-246ENST00000570287 NAP1L2Q9ULW6 460 aaPredicted RBP10.2□□□□□ -0.78
TCF4-246ENST00000570287 YEATS2Q9ULM3 1422 aa10.2□□□□□ -0.78
TCF4-246ENST00000570287 PLEKHH1Q9ULM0 1364 aa10.2□□□□□ -0.78
TCF4-246ENST00000570287 SERPINB4P48594 390 aa10.2□□□□□ -0.78
TCF4-246ENST00000570287 EXOC6Q8TAG9 804 aa10.2□□□□□ -0.78
TCF4-246ENST00000570287 TBC1D2Q9BYX2 928 aa10.2□□□□□ -0.78
TCF4-246ENST00000570287 TFIP11Q9UBB9 837 aaKnown RBP10.2□□□□□ -0.78
TCF4-246ENST00000570287 ZC3H6P61129 1189 aaKnown RBP10.19□□□□□ -0.78
TCF4-246ENST00000570287 STK32AQ8WU08 396 aa10.19□□□□□ -0.78
TCF4-246ENST00000570287 VAC14Q08AM6 782 aa10.19□□□□□ -0.78
TCF4-246ENST00000570287 IFNL1Q8IU54 200 aa10.19□□□□□ -0.78
TCF4-246ENST00000570287 PPME1Q9Y570 386 aa10.19□□□□□ -0.78
TCF4-246ENST00000570287 USP32Q8NFA0 1604 aa10.19□□□□□ -0.78
TCF4-246ENST00000570287 POLR3AO14802 1390 aaPredicted RBP10.18□□□□□ -0.78
TCF4-246ENST00000570287 GPR37L1O60883 481 aa10.18□□□□□ -0.78
TCF4-246ENST00000570287 TMEM132EQ6IEE7 984 aa10.18□□□□□ -0.78
TCF4-246ENST00000570287 NGEFQ8N5V2 710 aa10.18□□□□□ -0.78
TCF4-246ENST00000570287 RIPOR2Q9Y4F9 1068 aa10.18□□□□□ -0.78
TCF4-246ENST00000570287 ARHGEF28Q8N1W1 1705 aaKnown RBP10.18□□□□□ -0.78
TCF4-246ENST00000570287 GOLGA2Q08379 1002 aa10.18□□□□□ -0.78
TCF4-246ENST00000570287 PREX1Q8TCU6 1659 aa10.18□□□□□ -0.78
TCF4-246ENST00000570287 CANXP27824 592 aaKnown RBP10.18□□□□□ -0.78
TCF4-246ENST00000570287 DSG3P32926 999 aa10.18□□□□□ -0.78
TCF4-246ENST00000570287 IDI1Q13907 227 aa10.18□□□□□ -0.78
TCF4-246ENST00000570287 C8orf37Q96NL8 207 aa10.18□□□□□ -0.78
TCF4-246ENST00000570287 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.18□□□□□ -0.78
TCF4-246ENST00000570287 NSD3Q9BZ95 1437 aa10.18□□□□□ -0.78
TCF4-246ENST00000570287 TSR1Q2NL82 804 aaKnown RBP10.17□□□□□ -0.78
TCF4-246ENST00000570287 DUSP27Q5VZP5 1158 aa10.17□□□□□ -0.78
TCF4-246ENST00000570287 BANK1Q8NDB2 785 aa10.17□□□□□ -0.78
TCF4-246ENST00000570287 SOX12O15370 315 aa10.17□□□□□ -0.78
TCF4-246ENST00000570287 KLHL42Q9P2K6 505 aa10.17□□□□□ -0.78
TCF4-246ENST00000570287 QPCTQ16769 361 aa10.16□□□□□ -0.78
TCF4-246ENST00000570287 CYB5RLQ6IPT4 315 aa10.16□□□□□ -0.78
TCF4-246ENST00000570287 EVC2Q86UK5 1308 aa10.16□□□□□ -0.78
TCF4-246ENST00000570287 TMEM131LA2VDJ0 1609 aa10.16□□□□□ -0.78
TCF4-246ENST00000570287 SPDYE16A6NNV3 312 aaPredicted RBP10.16□□□□□ -0.78
TCF4-246ENST00000570287 NCLP19338 710 aaKnown RBP10.16□□□□□ -0.78
TCF4-246ENST00000570287 CLCN1P35523 988 aa10.16□□□□□ -0.78
TCF4-246ENST00000570287 SLFN5Q08AF3 891 aa10.16□□□□□ -0.78
TCF4-246ENST00000570287 IPO4Q8TEX9 1081 aaKnown RBP10.16□□□□□ -0.78
TCF4-246ENST00000570287 SLC12A5Q9H2X9 1139 aa10.16□□□□□ -0.78
TCF4-246ENST00000570287 DIP2BQ9P265 1576 aa10.16□□□□□ -0.78
TCF4-246ENST00000570287 REREQ9P2R6 1566 aa10.16□□□□□ -0.78
TCF4-246ENST00000570287 TRMT2AQ8IZ69 625 aaKnown RBP10.15□□□□□ -0.78
TCF4-246ENST00000570287 CDCA7Q9BWT1 371 aaPredicted RBP10.15□□□□□ -0.78
TCF4-246ENST00000570287 RBM27Q9P2N5 1060 aaKnown RBP10.15□□□□□ -0.78
TCF4-246ENST00000570287 SUGT1Q9Y2Z0 365 aa10.15□□□□□ -0.78
TCF4-246ENST00000570287 TULP4Q9NRJ4 1543 aa10.15□□□□□ -0.78
TCF4-246ENST00000570287 RIMBP3CA6NJZ7 1639 aa10.15□□□□□ -0.78
TCF4-246ENST00000570287 RIMBP3BA6NNM3 1639 aa10.15□□□□□ -0.78
TCF4-246ENST00000570287 RIMBP3Q9UFD9 1639 aa10.15□□□□□ -0.78
TCF4-246ENST00000570287 RRP9O43818 475 aaKnown RBP10.15□□□□□ -0.78
TCF4-246ENST00000570287 CLSTN1O94985 981 aa10.15□□□□□ -0.78
TCF4-246ENST00000570287 MORC1Q86VD1 984 aa10.15□□□□□ -0.78
TCF4-246ENST00000570287 CDHR5Q9HBB8 845 aa10.15□□□□□ -0.78
TCF4-246ENST00000570287 GPHNQ9NQX3 736 aaPredicted RBP10.15□□□□□ -0.78
TCF4-246ENST00000570287 SLAIN2Q9P270 581 aa10.15□□□□□ -0.78
TCF4-246ENST00000570287 TSNAXIP1Q2TAA8 658 aa10.14□□□□□ -0.79
TCF4-246ENST00000570287 TEX2Q8IWB9 1127 aa10.14□□□□□ -0.79
TCF4-246ENST00000570287 FAM217BQ9NTX9 383 aaPredicted RBP10.14□□□□□ -0.79
TCF4-246ENST00000570287 MYO5BQ9ULV0 1848 aa10.14□□□□□ -0.79
TCF4-246ENST00000570287 ANKRD33BA6NCL7 494 aa10.14□□□□□ -0.79
TCF4-246ENST00000570287 NSD2O96028 1365 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms