RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PLEKHG2Q9H7P9 1386 aa20.24■□□□□ 0.83
HERPUD1-219ENST00000570273 LMOD3Q0VAK6 560 aa20.24■□□□□ 0.83
HERPUD1-219ENST00000570273 CCDC27Q2M243 656 aa20.24■□□□□ 0.83
HERPUD1-219ENST00000570273 AMOTQ4VCS5 1084 aa20.24■□□□□ 0.83
HERPUD1-219ENST00000570273 CCDC9Q9Y3X0 531 aaKnown RBP20.24■□□□□ 0.83
HERPUD1-219ENST00000570273 OVOS2A0A0G2JMS6 1433 aa20.23■□□□□ 0.83
HERPUD1-219ENST00000570273 POTEAQ6S8J7 498 aa20.23■□□□□ 0.83
HERPUD1-219ENST00000570273 USP21Q9UK80 565 aa20.23■□□□□ 0.83
HERPUD1-219ENST00000570273 PARP4Q9UKK3 1724 aaKnown RBP20.23■□□□□ 0.83
HERPUD1-219ENST00000570273 ZNF521Q96K83 1311 aa20.22■□□□□ 0.83
HERPUD1-219ENST00000570273 CENPBP07199 599 aaPredicted RBP20.22■□□□□ 0.83
HERPUD1-219ENST00000570273 IL2RBP14784 551 aa20.22■□□□□ 0.83
HERPUD1-219ENST00000570273 ZNF772Q68DY9 489 aaPredicted RBP20.22■□□□□ 0.83
HERPUD1-219ENST00000570273 ZNF530Q6P9A1 599 aaPredicted RBP20.22■□□□□ 0.83
HERPUD1-219ENST00000570273 WWC1Q8IX03 1113 aa20.22■□□□□ 0.83
HERPUD1-219ENST00000570273 TRIM35Q9UPQ4 493 aa20.22■□□□□ 0.83
HERPUD1-219ENST00000570273 SPATA31A1Q5TZJ5 1347 aa20.22■□□□□ 0.83
HERPUD1-219ENST00000570273 SPATA31A5Q5VU36 1347 aa20.22■□□□□ 0.83
HERPUD1-219ENST00000570273 SPATA31A7Q8IWB4 1347 aa20.22■□□□□ 0.83
HERPUD1-219ENST00000570273 MAP3K5Q99683 1374 aa20.21■□□□□ 0.83
HERPUD1-219ENST00000570273 VPS72Q15906 364 aa20.2■□□□□ 0.82
HERPUD1-219ENST00000570273 SPG7Q9UQ90 795 aa20.2■□□□□ 0.82
HERPUD1-219ENST00000570273 DISP2A7MBM2 1401 aa20.2■□□□□ 0.82
HERPUD1-219ENST00000570273 PKD1L3Q7Z443 1732 aa20.19■□□□□ 0.82
HERPUD1-219ENST00000570273 ATRNO75882 1429 aa20.19■□□□□ 0.82
HERPUD1-219ENST00000570273 PDE3BQ13370 1112 aa20.19■□□□□ 0.82
HERPUD1-219ENST00000570273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.19■□□□□ 0.82
HERPUD1-219ENST00000570273 DLG5Q8TDM6 1919 aa20.18■□□□□ 0.82
HERPUD1-219ENST00000570273 WNK3Q9BYP7 1800 aa20.18■□□□□ 0.82
HERPUD1-219ENST00000570273 GOLGA2Q08379 1002 aa20.18■□□□□ 0.82
HERPUD1-219ENST00000570273 C1orf141Q5JVX7 400 aa20.18■□□□□ 0.82
HERPUD1-219ENST00000570273 ILDR2Q71H61 639 aa20.18■□□□□ 0.82
HERPUD1-219ENST00000570273 RTF1Q92541 710 aaKnown RBP20.18■□□□□ 0.82
HERPUD1-219ENST00000570273 THRAP3Q9Y2W1 955 aaKnown RBP20.18■□□□□ 0.82
HERPUD1-219ENST00000570273 GNAT3A8MTJ3 354 aa20.17■□□□□ 0.82
HERPUD1-219ENST00000570273 WDR63Q8IWG1 891 aa20.17■□□□□ 0.82
HERPUD1-219ENST00000570273 AKAP4Q5JQC9 854 aa20.16■□□□□ 0.82
HERPUD1-219ENST00000570273 ZCRB1Q8TBF4 217 aaKnown RBP20.16■□□□□ 0.82
HERPUD1-219ENST00000570273 THUMPD2Q9BTF0 503 aaKnown RBP20.16■□□□□ 0.82
HERPUD1-219ENST00000570273 HTATSF1O43719 755 aaKnown RBP20.15■□□□□ 0.82
HERPUD1-219ENST00000570273 CALD1Q05682 793 aaKnown RBP20.15■□□□□ 0.82
HERPUD1-219ENST00000570273 DCTN1Q14203 1278 aa20.15■□□□□ 0.82
HERPUD1-219ENST00000570273 MCM10Q7L590 875 aa20.15■□□□□ 0.82
HERPUD1-219ENST00000570273 CDCA7LQ96GN5 454 aa20.15■□□□□ 0.82
HERPUD1-219ENST00000570273 CDCA7Q9BWT1 371 aaPredicted RBP20.15■□□□□ 0.82
HERPUD1-219ENST00000570273 PCDH11XQ9BZA7 1347 aa20.15■□□□□ 0.82
HERPUD1-219ENST00000570273 PCDH11YQ9BZA8 1340 aa20.15■□□□□ 0.82
HERPUD1-219ENST00000570273 E9PSI1 815 aa20.13■□□□□ 0.81
HERPUD1-219ENST00000570273 BARGINQ6ZT62 677 aa20.13■□□□□ 0.81
HERPUD1-219ENST00000570273 TRPC5Q9UL62 973 aaPredicted RBP20.13■□□□□ 0.81
HERPUD1-219ENST00000570273 IL16Q14005 1332 aa20.13■□□□□ 0.81
HERPUD1-219ENST00000570273 GLI3P10071 1580 aa20.13■□□□□ 0.81
HERPUD1-219ENST00000570273 TNS2Q63HR2 1409 aa20.13■□□□□ 0.81
HERPUD1-219ENST00000570273 PHKG2P15735 406 aa20.12■□□□□ 0.81
HERPUD1-219ENST00000570273 IFNL2Q8IZJ0 200 aa20.12■□□□□ 0.81
HERPUD1-219ENST00000570273 QTRT2Q9H974 415 aaKnown RBP20.12■□□□□ 0.81
HERPUD1-219ENST00000570273 CYP27B1O15528 508 aa20.11■□□□□ 0.81
HERPUD1-219ENST00000570273 SLFN5Q08AF3 891 aa20.11■□□□□ 0.81
HERPUD1-219ENST00000570273 SPINK5Q9NQ38 1064 aaPredicted RBP20.11■□□□□ 0.81
HERPUD1-219ENST00000570273 LRRC37A3O60309 1634 aa20.11■□□□□ 0.81
HERPUD1-219ENST00000570273 FAM98CQ17RN3 349 aaKnown RBP20.1■□□□□ 0.81
HERPUD1-219ENST00000570273 MPRIPQ6WCQ1 1025 aa20.1■□□□□ 0.81
HERPUD1-219ENST00000570273 SHANK3Q9BYB0 1731 aa20.1■□□□□ 0.81
HERPUD1-219ENST00000570273 MYH16Q9H6N6 1097 aa20.1■□□□□ 0.81
HERPUD1-219ENST00000570273 HSP90AB1P08238 724 aaKnown RBP20.09■□□□□ 0.81
HERPUD1-219ENST00000570273 IL17REQ8NFR9 667 aa20.09■□□□□ 0.81
HERPUD1-219ENST00000570273 DDX54Q8TDD1 881 aaKnown RBP20.09■□□□□ 0.81
HERPUD1-219ENST00000570273 GJD4Q96KN9 370 aaPredicted RBP20.09■□□□□ 0.81
HERPUD1-219ENST00000570273 LAS1LQ9Y4W2 734 aaKnown RBP20.09■□□□□ 0.81
HERPUD1-219ENST00000570273 A0A0G2JS52 829 aa20.08■□□□□ 0.8
HERPUD1-219ENST00000570273 EXOC5O00471 708 aa20.08■□□□□ 0.8
HERPUD1-219ENST00000570273 KDM6AO15550 1401 aaPredicted RBP20.08■□□□□ 0.8
HERPUD1-219ENST00000570273 RNMTO43148 476 aaKnown RBP20.08■□□□□ 0.8
HERPUD1-219ENST00000570273 RBM6P78332 1123 aaKnown RBP20.08■□□□□ 0.8
HERPUD1-219ENST00000570273 MYT1Q01538 1121 aa20.08■□□□□ 0.8
HERPUD1-219ENST00000570273 DDB1Q16531 1140 aa20.08■□□□□ 0.8
HERPUD1-219ENST00000570273 CEMIPQ8WUJ3 1361 aa20.08■□□□□ 0.8
HERPUD1-219ENST00000570273 IFT57Q9NWB7 429 aa20.08■□□□□ 0.8
HERPUD1-219ENST00000570273 RXRBP28702 533 aa20.07■□□□□ 0.8
HERPUD1-219ENST00000570273 GNAI1P63096 354 aa20.07■□□□□ 0.8
HERPUD1-219ENST00000570273 DUSP27Q5VZP5 1158 aa20.07■□□□□ 0.8
HERPUD1-219ENST00000570273 LGR6Q9HBX8 967 aa20.07■□□□□ 0.8
HERPUD1-219ENST00000570273 FANCIQ9NVI1 1328 aa20.06■□□□□ 0.8
HERPUD1-219ENST00000570273 DCAF5Q96JK2 942 aa20.06■□□□□ 0.8
HERPUD1-219ENST00000570273 ADAMTS7Q9UKP4 1686 aa20.06■□□□□ 0.8
HERPUD1-219ENST00000570273 THSD7AQ9UPZ6 1657 aa20.06■□□□□ 0.8
HERPUD1-219ENST00000570273 RGS12O14924 1447 aa20.05■□□□□ 0.8
HERPUD1-219ENST00000570273 TEFQ10587 303 aa20.05■□□□□ 0.8
HERPUD1-219ENST00000570273 TRMT2AQ8IZ69 625 aaKnown RBP20.05■□□□□ 0.8
HERPUD1-219ENST00000570273 TSR2Q969E8 191 aaKnown RBP20.05■□□□□ 0.8
HERPUD1-219ENST00000570273 ZNF853P0CG23 659 aa20.04■□□□□ 0.8
HERPUD1-219ENST00000570273 CFAP44Q96MT7 982 aa20.04■□□□□ 0.8
HERPUD1-219ENST00000570273 NKX1-1Q15270 411 aaPredicted RBP20.02■□□□□ 0.8
HERPUD1-219ENST00000570273 MBIPQ9NS73 344 aa20.02■□□□□ 0.8
HERPUD1-219ENST00000570273 MRC1P22897 1456 aa20.02■□□□□ 0.8
HERPUD1-219ENST00000570273 SCN11AQ9UI33 1791 aa20.02■□□□□ 0.8
HERPUD1-219ENST00000570273 TAF7Q15545 349 aaPredicted RBP20.02■□□□□ 0.79
HERPUD1-219ENST00000570273 TSPYL4Q9UJ04 414 aa20.02■□□□□ 0.79
HERPUD1-219ENST00000570273 ONECUT3O60422 494 aaPredicted RBP20.01■□□□□ 0.79
HERPUD1-219ENST00000570273 CHL1O00533 1208 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms