RNA–Protein interactions for RNA: ENST00000570136.5

PDPK1-217, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 2

Gene PDPK1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-217ENST00000570136 PARD3Q8TEW0 1356 aa20.24■□□□□ 0.83
PDPK1-217ENST00000570136 DDX10Q13206 875 aaKnown RBP20.24■□□□□ 0.83
PDPK1-217ENST00000570136 R3HDM1Q15032 1099 aaKnown RBP20.24■□□□□ 0.83
PDPK1-217ENST00000570136 ZNF316A6NFI3 1004 aaPredicted RBP20.23■□□□□ 0.83
PDPK1-217ENST00000570136 TRIM37O94972 964 aa20.23■□□□□ 0.83
PDPK1-217ENST00000570136 EZH2Q15910 746 aaKnown RBP20.23■□□□□ 0.83
PDPK1-217ENST00000570136 MARCH10Q8NA82 808 aaPredicted RBP20.23■□□□□ 0.83
PDPK1-217ENST00000570136 ZCRB1Q8TBF4 217 aaKnown RBP20.23■□□□□ 0.83
PDPK1-217ENST00000570136 CFAP53Q96M91 514 aa20.23■□□□□ 0.83
PDPK1-217ENST00000570136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.23■□□□□ 0.83
PDPK1-217ENST00000570136 RALBP1Q15311 655 aa20.22■□□□□ 0.83
PDPK1-217ENST00000570136 PCDH11XQ9BZA7 1347 aa20.22■□□□□ 0.83
PDPK1-217ENST00000570136 PCDH11YQ9BZA8 1340 aa20.22■□□□□ 0.83
PDPK1-217ENST00000570136 RGPD3A6NKT7 1758 aaPredicted RBP20.21■□□□□ 0.83
PDPK1-217ENST00000570136 RGPD4Q7Z3J3 1758 aa20.21■□□□□ 0.83
PDPK1-217ENST00000570136 DIAPH1O60610 1272 aaKnown RBP20.21■□□□□ 0.83
PDPK1-217ENST00000570136 IL13P35225 146 aa20.21■□□□□ 0.83
PDPK1-217ENST00000570136 USHBP1Q8N6Y0 703 aa20.21■□□□□ 0.83
PDPK1-217ENST00000570136 CAMKK2Q96RR4 588 aa20.21■□□□□ 0.83
PDPK1-217ENST00000570136 KDRP35968 1356 aa20.21■□□□□ 0.83
PDPK1-217ENST00000570136 NHSQ6T4R5 1651 aa20.2■□□□□ 0.82
PDPK1-217ENST00000570136 COL3A1P02461 1466 aaPredicted RBP20.2■□□□□ 0.82
PDPK1-217ENST00000570136 PPP2R1AP30153 589 aa20.19■□□□□ 0.82
PDPK1-217ENST00000570136 SPG7Q9UQ90 795 aa20.19■□□□□ 0.82
PDPK1-217ENST00000570136 APBA3O96018 575 aa20.18■□□□□ 0.82
PDPK1-217ENST00000570136 CNGB1Q14028 1251 aaPredicted RBP20.18■□□□□ 0.82
PDPK1-217ENST00000570136 KAT6BQ8WYB5 2073 aa20.17■□□□□ 0.82
PDPK1-217ENST00000570136 BCL11BQ9C0K0 894 aaPredicted RBP20.17■□□□□ 0.82
PDPK1-217ENST00000570136 AMOTQ4VCS5 1084 aa20.15■□□□□ 0.82
PDPK1-217ENST00000570136 DDX54Q8TDD1 881 aaKnown RBP20.15■□□□□ 0.82
PDPK1-217ENST00000570136 NUDCQ9Y266 331 aa20.15■□□□□ 0.82
PDPK1-217ENST00000570136 DOT1LQ8TEK3 1739 aa20.13■□□□□ 0.81
PDPK1-217ENST00000570136 SULT6B1Q6IMI4 303 aa20.13■□□□□ 0.81
PDPK1-217ENST00000570136 PLEKHO1Q53GL0 409 aaPredicted RBP20.12■□□□□ 0.81
PDPK1-217ENST00000570136 MYBBP1AQ9BQG0 1328 aaKnown RBP20.11■□□□□ 0.81
PDPK1-217ENST00000570136 PLSCR1O15162 318 aa20.11■□□□□ 0.81
PDPK1-217ENST00000570136 BTAF1O14981 1849 aa20.11■□□□□ 0.81
PDPK1-217ENST00000570136 HSP90AB1P08238 724 aaKnown RBP20.1■□□□□ 0.81
PDPK1-217ENST00000570136 NKX1-1Q15270 411 aaPredicted RBP20.1■□□□□ 0.81
PDPK1-217ENST00000570136 IFNL2Q8IZJ0 200 aa20.1■□□□□ 0.81
PDPK1-217ENST00000570136 RREB1Q92766 1687 aa20.1■□□□□ 0.81
PDPK1-217ENST00000570136 CYP27B1O15528 508 aa20.08■□□□□ 0.81
PDPK1-217ENST00000570136 AEBP1Q8IUX7 1158 aa20.08■□□□□ 0.81
PDPK1-217ENST00000570136 U2SURPO15042 1029 aaKnown RBP20.07■□□□□ 0.8
PDPK1-217ENST00000570136 NBPF14Q5TI25 921 aa20.07■□□□□ 0.8
PDPK1-217ENST00000570136 PHKG2P15735 406 aa20.06■□□□□ 0.8
PDPK1-217ENST00000570136 PRKRIP1Q9H875 184 aaPredicted RBP20.06■□□□□ 0.8
PDPK1-217ENST00000570136 ITGB4P16144 1822 aa20.06■□□□□ 0.8
PDPK1-217ENST00000570136 NUP188Q5SRE5 1749 aa20.05■□□□□ 0.8
PDPK1-217ENST00000570136 HMGB2P26583 209 aaKnown RBP20.05■□□□□ 0.8
PDPK1-217ENST00000570136 C1orf141Q5JVX7 400 aa20.05■□□□□ 0.8
PDPK1-217ENST00000570136 TOGARAM1Q9Y4F4 1720 aa20.05■□□□□ 0.8
PDPK1-217ENST00000570136 HMOX1P09601 288 aa20.04■□□□□ 0.8
PDPK1-217ENST00000570136 ZNF530Q6P9A1 599 aaPredicted RBP20.04■□□□□ 0.8
PDPK1-217ENST00000570136 ACSBG1Q96GR2 724 aa20.04■□□□□ 0.8
PDPK1-217ENST00000570136 KCNQ2O43526 872 aa20.03■□□□□ 0.8
PDPK1-217ENST00000570136 FCHSD2O94868 740 aa20.03■□□□□ 0.8
PDPK1-217ENST00000570136 DCAF5Q96JK2 942 aa20.03■□□□□ 0.8
PDPK1-217ENST00000570136 U2AF1L5P0DN76 240 aaPredicted RBP20.02■□□□□ 0.8
PDPK1-217ENST00000570136 PRIM1P49642 420 aaKnown RBP20.02■□□□□ 0.8
PDPK1-217ENST00000570136 U2AF1Q01081 240 aaKnown RBP eCLIP20.02■□□□□ 0.8
PDPK1-217ENST00000570136 PNNQ9H307 717 aaKnown RBP20.02■□□□□ 0.8
PDPK1-217ENST00000570136 SCN11AQ9UI33 1791 aa20.02■□□□□ 0.8
PDPK1-217ENST00000570136 ERVV-2B6SEH9 535 aa20.01■□□□□ 0.79
PDPK1-217ENST00000570136 AKAP4Q5JQC9 854 aa20.01■□□□□ 0.79
PDPK1-217ENST00000570136 GAS2L2Q8NHY3 880 aa20.01■□□□□ 0.79
PDPK1-217ENST00000570136 SYTL4Q96C24 671 aaPredicted RBP20.01■□□□□ 0.79
PDPK1-217ENST00000570136 LY75O60449 1722 aa20.01■□□□□ 0.79
PDPK1-217ENST00000570136 VIRMAQ69YN4 1812 aaKnown RBP20■□□□□ 0.79
PDPK1-217ENST00000570136 RSPH6AQ9H0K4 717 aa20■□□□□ 0.79
PDPK1-217ENST00000570136 NEFMP07197 916 aa19.99■□□□□ 0.79
PDPK1-217ENST00000570136 ADAMTS7Q9UKP4 1686 aa19.99■□□□□ 0.79
PDPK1-217ENST00000570136 PTF1AQ7RTS3 328 aa19.98■□□□□ 0.79
PDPK1-217ENST00000570136 SMARCC1Q92922 1105 aaPredicted RBP19.98■□□□□ 0.79
PDPK1-217ENST00000570136 SPON1Q9HCB6 807 aa19.98■□□□□ 0.79
PDPK1-217ENST00000570136 ANP32CO43423 234 aa19.97■□□□□ 0.79
PDPK1-217ENST00000570136 PRKAR2BP31323 418 aa19.97■□□□□ 0.79
PDPK1-217ENST00000570136 SLC27A3Q5K4L6 730 aa19.97■□□□□ 0.79
PDPK1-217ENST00000570136 TMOD3Q9NYL9 352 aa19.97■□□□□ 0.79
PDPK1-217ENST00000570136 KDM6AO15550 1401 aaPredicted RBP19.96■□□□□ 0.79
PDPK1-217ENST00000570136 PPP1R1BQ9UD71 204 aaPredicted RBP19.96■□□□□ 0.79
PDPK1-217ENST00000570136 TXNRD1Q16881 649 aa19.95■□□□□ 0.78
PDPK1-217ENST00000570136 MTHFSDQ2M296 383 aaKnown RBP19.95■□□□□ 0.78
PDPK1-217ENST00000570136 MPRIPQ6WCQ1 1025 aa19.95■□□□□ 0.78
PDPK1-217ENST00000570136 MAP3K5Q99683 1374 aa19.95■□□□□ 0.78
PDPK1-217ENST00000570136 MRC1P22897 1456 aa19.94■□□□□ 0.78
PDPK1-217ENST00000570136 ANO8Q9HCE9 1232 aaPredicted RBP19.94■□□□□ 0.78
PDPK1-217ENST00000570136 ZNF831Q5JPB2 1677 aa19.93■□□□□ 0.78
PDPK1-217ENST00000570136 PAPPAQ13219 1627 aa19.92■□□□□ 0.78
PDPK1-217ENST00000570136 PIGBQ92521 554 aa19.92■□□□□ 0.78
PDPK1-217ENST00000570136 PALLDQ8WX93 1383 aa19.92■□□□□ 0.78
PDPK1-217ENST00000570136 GNAT3A8MTJ3 354 aa19.91■□□□□ 0.78
PDPK1-217ENST00000570136 CABP4P57796 275 aa19.91■□□□□ 0.78
PDPK1-217ENST00000570136 WDR43Q15061 677 aaKnown RBP eCLIP19.91■□□□□ 0.78
PDPK1-217ENST00000570136 PROM2Q8N271 834 aa19.9■□□□□ 0.78
PDPK1-217ENST00000570136 MAPK8IP3Q9UPT6 1336 aa19.9■□□□□ 0.78
PDPK1-217ENST00000570136 HTATSF1O43719 755 aaKnown RBP19.89■□□□□ 0.77
PDPK1-217ENST00000570136 YY1P25490 414 aa19.89■□□□□ 0.77
PDPK1-217ENST00000570136 TAF1LQ8IZX4 1826 aa19.88■□□□□ 0.77
PDPK1-217ENST00000570136 QSER1Q2KHR3 1735 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms