RNA–Protein interactions for RNA: ENST00000569804.2

LPCAT4-208, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-208ENST00000569804 POLD1P28340 1107 aa15.28■□□□□ 0.04
LPCAT4-208ENST00000569804 DDX54Q8TDD1 881 aaKnown RBP15.28■□□□□ 0.04
LPCAT4-208ENST00000569804 MAP3K19Q56UN5 1328 aa15.27■□□□□ 0.04
LPCAT4-208ENST00000569804 PRIM1P49642 420 aaKnown RBP15.27■□□□□ 0.04
LPCAT4-208ENST00000569804 KLHL34Q8N239 644 aa15.27■□□□□ 0.04
LPCAT4-208ENST00000569804 HDGFL2Q7Z4V5 671 aaPredicted RBP15.26■□□□□ 0.03
LPCAT4-208ENST00000569804 TFCP2L1Q9NZI6 479 aa15.26■□□□□ 0.03
LPCAT4-208ENST00000569804 ADCY9O60503 1353 aa15.25■□□□□ 0.03
LPCAT4-208ENST00000569804 HOXC9P31274 260 aa15.25■□□□□ 0.03
LPCAT4-208ENST00000569804 TMC1Q8TDI8 760 aa15.25■□□□□ 0.03
LPCAT4-208ENST00000569804 PUS7Q96PZ0 661 aaKnown RBP15.25■□□□□ 0.03
LPCAT4-208ENST00000569804 NEUROD1Q13562 356 aa15.24■□□□□ 0.03
LPCAT4-208ENST00000569804 COL23A1Q86Y22 540 aaPredicted RBP15.24■□□□□ 0.03
LPCAT4-208ENST00000569804 LTV1Q96GA3 475 aaPredicted RBP15.24■□□□□ 0.03
LPCAT4-208ENST00000569804 RTL1A6NKG5 1358 aa15.24■□□□□ 0.03
LPCAT4-208ENST00000569804 FBLN1P23142 703 aa15.23■□□□□ 0.03
LPCAT4-208ENST00000569804 PELP1Q8IZL8 1130 aaKnown RBP15.23■□□□□ 0.03
LPCAT4-208ENST00000569804 SYTL4Q96C24 671 aaPredicted RBP15.23■□□□□ 0.03
LPCAT4-208ENST00000569804 CARD11Q9BXL7 1154 aa15.23■□□□□ 0.03
LPCAT4-208ENST00000569804 TERF2IPQ9NYB0 399 aa15.23■□□□□ 0.03
LPCAT4-208ENST00000569804 CCNL1Q9UK58 526 aaPredicted RBP15.23■□□□□ 0.03
LPCAT4-208ENST00000569804 ATP10DQ9P241 1426 aa15.23■□□□□ 0.03
LPCAT4-208ENST00000569804 UBR3Q6ZT12 1888 aa15.23■□□□□ 0.03
LPCAT4-208ENST00000569804 ITGB4P16144 1822 aa15.22■□□□□ 0.03
LPCAT4-208ENST00000569804 IFFO2Q5TF58 517 aa15.22■□□□□ 0.03
LPCAT4-208ENST00000569804 TESK2Q96S53 571 aa15.22■□□□□ 0.03
LPCAT4-208ENST00000569804 C4BP0C0L5 1744 aa15.22■□□□□ 0.03
LPCAT4-208ENST00000569804 PKD1L3Q7Z443 1732 aa15.21■□□□□ 0.03
LPCAT4-208ENST00000569804 ZCRB1Q8TBF4 217 aaKnown RBP15.21■□□□□ 0.03
LPCAT4-208ENST00000569804 MAP2P11137 1827 aaKnown RBP15.21■□□□□ 0.03
LPCAT4-208ENST00000569804 USP47Q96K76 1375 aa15.2■□□□□ 0.02
LPCAT4-208ENST00000569804 GRIN3BO60391 1043 aa15.19■□□□□ 0.02
LPCAT4-208ENST00000569804 NBPF6Q5VWK0 638 aa15.19■□□□□ 0.02
LPCAT4-208ENST00000569804 MSL1Q68DK7 614 aa15.19■□□□□ 0.02
LPCAT4-208ENST00000569804 AMIGO3Q86WK7 504 aa15.19■□□□□ 0.02
LPCAT4-208ENST00000569804 NBPF4Q96M43 638 aa15.19■□□□□ 0.02
LPCAT4-208ENST00000569804 KIF20BQ96Q89 1820 aa15.18■□□□□ 0.02
LPCAT4-208ENST00000569804 COG3Q96JB2 828 aa15.18■□□□□ 0.02
LPCAT4-208ENST00000569804 CICQ96RK0 1608 aaPredicted RBP15.17■□□□□ 0.02
LPCAT4-208ENST00000569804 PALLDQ8WX93 1383 aa15.17■□□□□ 0.02
LPCAT4-208ENST00000569804 USHBP1Q8N6Y0 703 aa15.17■□□□□ 0.02
LPCAT4-208ENST00000569804 KIAA1551Q9HCM1 1747 aa15.17■□□□□ 0.02
LPCAT4-208ENST00000569804 NCAPD2Q15021 1401 aa15.17■□□□□ 0.02
LPCAT4-208ENST00000569804 CGNL1Q0VF96 1302 aa15.17■□□□□ 0.02
LPCAT4-208ENST00000569804 AMPHP49418 695 aa15.16■□□□□ 0.02
LPCAT4-208ENST00000569804 RRS1Q15050 365 aaKnown RBP15.16■□□□□ 0.02
LPCAT4-208ENST00000569804 CD2APQ9Y5K6 639 aa15.16■□□□□ 0.02
LPCAT4-208ENST00000569804 ANKRD26Q9UPS8 1709 aa15.16■□□□□ 0.02
LPCAT4-208ENST00000569804 KIF13BQ9NQT8 1826 aa15.14■□□□□ 0.01
LPCAT4-208ENST00000569804 PCDH11XQ9BZA7 1347 aa15.14■□□□□ 0.01
LPCAT4-208ENST00000569804 PCDH11YQ9BZA8 1340 aa15.14■□□□□ 0.01
LPCAT4-208ENST00000569804 INSRP06213 1382 aa15.13■□□□□ 0.01
LPCAT4-208ENST00000569804 FYB1O15117 783 aa15.13■□□□□ 0.01
LPCAT4-208ENST00000569804 CYP27B1O15528 508 aa15.13■□□□□ 0.01
LPCAT4-208ENST00000569804 MSH5O43196 834 aa15.13■□□□□ 0.01
LPCAT4-208ENST00000569804 SMG6Q86US8 1419 aaKnown RBP15.12■□□□□ 0.01
LPCAT4-208ENST00000569804 ST20-MTHFSA0A0A6YYL1 179 aa15.12■□□□□ 0.01
LPCAT4-208ENST00000569804 HSP90AB2PQ58FF8 381 aa15.11■□□□□ 0.01
LPCAT4-208ENST00000569804 SMIM5Q71RC9 77 aa15.11■□□□□ 0.01
LPCAT4-208ENST00000569804 RAPGEF4Q8WZA2 1011 aa15.11■□□□□ 0.01
LPCAT4-208ENST00000569804 GGNBP2Q9H3C7 697 aa15.11■□□□□ 0.01
LPCAT4-208ENST00000569804 FLT4P35916 1363 aa15.11■□□□□ 0.01
LPCAT4-208ENST00000569804 KIF24Q5T7B8 1368 aa15.11■□□□□ 0.01
LPCAT4-208ENST00000569804 HSPA6P17066 643 aa15.1■□□□□ 0.01
LPCAT4-208ENST00000569804 TATP17735 454 aaPredicted RBP15.1■□□□□ 0.01
LPCAT4-208ENST00000569804 FLAD1Q8NFF5 587 aa15.1■□□□□ 0.01
LPCAT4-208ENST00000569804 GPBP1L1Q9HC44 474 aaPredicted RBP15.1■□□□□ 0.01
LPCAT4-208ENST00000569804 IGSF1Q8N6C5 1336 aa15.1■□□□□ 0.01
LPCAT4-208ENST00000569804 TONSLQ96HA7 1378 aa15.09■□□□□ 0.01
LPCAT4-208ENST00000569804 BRCA1P38398 1863 aaKnown RBP15.08■□□□□ 0.01
LPCAT4-208ENST00000569804 MPRIPQ6WCQ1 1025 aa15.08■□□□□ 0
LPCAT4-208ENST00000569804 NSD3Q9BZ95 1437 aa15.08■□□□□ 0
LPCAT4-208ENST00000569804 PXDNLA1KZ92 1463 aa15.08■□□□□ 0
LPCAT4-208ENST00000569804 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.07■□□□□ 0
LPCAT4-208ENST00000569804 KIF3CO14782 793 aa15.07■□□□□ 0
LPCAT4-208ENST00000569804 PIGBQ92521 554 aa15.07■□□□□ 0
LPCAT4-208ENST00000569804 N4BP2Q86UW6 1770 aaPredicted RBP15.06■□□□□ 0
LPCAT4-208ENST00000569804 NKX1-1Q15270 411 aaPredicted RBP15.06■□□□□ 0
LPCAT4-208ENST00000569804 LINC00116Q8NCU8 138 aa15.06■□□□□ 0
LPCAT4-208ENST00000569804 ZNF526Q8TF50 670 aaPredicted RBP15.06■□□□□ 0
LPCAT4-208ENST00000569804 AK7Q96M32 723 aa15.06■□□□□ 0
LPCAT4-208ENST00000569804 ZNF831Q5JPB2 1677 aa15.06■□□□□ 0
LPCAT4-208ENST00000569804 PHF14O94880 888 aa15.05■□□□□ -0
LPCAT4-208ENST00000569804 SSFA2P28290 1259 aa15.05■□□□□ -0
LPCAT4-208ENST00000569804 SMARCC1Q92922 1105 aaPredicted RBP15.05■□□□□ -0
LPCAT4-208ENST00000569804 WWC3Q9ULE0 1092 aa15.05■□□□□ -0
LPCAT4-208ENST00000569804 COL5A3P25940 1745 aaPredicted RBP15.05■□□□□ -0
LPCAT4-208ENST00000569804 KDRP35968 1356 aa15.04■□□□□ -0
LPCAT4-208ENST00000569804 EMILIN1Q9Y6C2 1016 aa15.04■□□□□ -0
LPCAT4-208ENST00000569804 C10orf71Q711Q0 1435 aa15.03■□□□□ -0
LPCAT4-208ENST00000569804 LOC102724428A0A0B4J2F2 783 aa15.03■□□□□ -0
LPCAT4-208ENST00000569804 HMGB2P26583 209 aaKnown RBP15.03■□□□□ -0
LPCAT4-208ENST00000569804 SIK1P57059 783 aa15.03■□□□□ -0
LPCAT4-208ENST00000569804 ITPK1Q13572 414 aa15.03■□□□□ -0
LPCAT4-208ENST00000569804 C4AP0C0L4 1744 aa15.03■□□□□ -0
LPCAT4-208ENST00000569804 CARD14Q9BXL6 1004 aa15.02■□□□□ -0
LPCAT4-208ENST00000569804 SLC24A1O60721 1099 aa15.01□□□□□ -0.01
LPCAT4-208ENST00000569804 MYH14Q7Z406 1995 aaKnown RBP15□□□□□ -0.01
LPCAT4-208ENST00000569804 ASAP1Q9ULH1 1129 aa15□□□□□ -0.01
LPCAT4-208ENST00000569804 ARFGEF1Q9Y6D6 1849 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms