RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 ARHGEF28Q8N1W1 1705 aaKnown RBP13.25□□□□□ -0.29
TCF4-243ENST00000569357 CPSF1Q10570 1443 aaKnown RBP13.25□□□□□ -0.29
TCF4-243ENST00000569357 NLRP2Q9NX02 1062 aa13.25□□□□□ -0.29
TCF4-243ENST00000569357 WWC3Q9ULE0 1092 aa13.25□□□□□ -0.29
TCF4-243ENST00000569357 WNK3Q9BYP7 1800 aa13.25□□□□□ -0.29
TCF4-243ENST00000569357 SLIT3O75094 1523 aa13.24□□□□□ -0.29
TCF4-243ENST00000569357 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
TCF4-243ENST00000569357 APLP1P51693 650 aa13.24□□□□□ -0.29
TCF4-243ENST00000569357 SLC27A3Q5K4L6 730 aa13.24□□□□□ -0.29
TCF4-243ENST00000569357 MSL1Q68DK7 614 aa13.24□□□□□ -0.29
TCF4-243ENST00000569357 KCNH5Q8NCM2 988 aa13.24□□□□□ -0.29
TCF4-243ENST00000569357 SYTL4Q96C24 671 aaPredicted RBP13.24□□□□□ -0.29
TCF4-243ENST00000569357 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
TCF4-243ENST00000569357 IL2RBP14784 551 aa13.23□□□□□ -0.29
TCF4-243ENST00000569357 SSUH2Q9Y2M2 353 aa13.22□□□□□ -0.29
TCF4-243ENST00000569357 COL18A1P39060 1754 aa13.22□□□□□ -0.29
TCF4-243ENST00000569357 COL13A1Q5TAT6 717 aaPredicted RBP13.21□□□□□ -0.29
TCF4-243ENST00000569357 DDX54Q8TDD1 881 aaKnown RBP13.21□□□□□ -0.29
TCF4-243ENST00000569357 STAC3Q96MF2 364 aa13.21□□□□□ -0.29
TCF4-243ENST00000569357 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
TCF4-243ENST00000569357 KIF3CO14782 793 aa13.2□□□□□ -0.3
TCF4-243ENST00000569357 BTAF1O14981 1849 aa13.2□□□□□ -0.3
TCF4-243ENST00000569357 ADCY9O60503 1353 aa13.2□□□□□ -0.3
TCF4-243ENST00000569357 COL23A1Q86Y22 540 aaPredicted RBP13.19□□□□□ -0.3
TCF4-243ENST00000569357 TNS4Q8IZW8 715 aa13.19□□□□□ -0.3
TCF4-243ENST00000569357 DNAJC5GQ8N7S2 189 aa13.19□□□□□ -0.3
TCF4-243ENST00000569357 TTC21BQ7Z4L5 1316 aa13.18□□□□□ -0.3
TCF4-243ENST00000569357 CENPJQ9HC77 1338 aaPredicted RBP13.18□□□□□ -0.3
TCF4-243ENST00000569357 RGPD5Q99666 1765 aa13.18□□□□□ -0.3
TCF4-243ENST00000569357 KAT6BQ8WYB5 2073 aa13.18□□□□□ -0.3
TCF4-243ENST00000569357 CD2APQ9Y5K6 639 aa13.18□□□□□ -0.3
TCF4-243ENST00000569357 ABCC6O95255 1503 aa13.18□□□□□ -0.3
TCF4-243ENST00000569357 NBPF1Q3BBV0 1214 aa13.17□□□□□ -0.3
TCF4-243ENST00000569357 CCNL1Q9UK58 526 aaPredicted RBP13.17□□□□□ -0.3
TCF4-243ENST00000569357 TRPM1Q7Z4N2 1603 aa13.17□□□□□ -0.3
TCF4-243ENST00000569357 PIK3C2AO00443 1686 aa13.16□□□□□ -0.3
TCF4-243ENST00000569357 TOMM70O94826 608 aa13.16□□□□□ -0.3
TCF4-243ENST00000569357 PRIM1P49642 420 aaKnown RBP13.16□□□□□ -0.3
TCF4-243ENST00000569357 ERBB3P21860 1342 aa13.15□□□□□ -0.3
TCF4-243ENST00000569357 ANKRD24Q8TF21 1146 aa13.15□□□□□ -0.3
TCF4-243ENST00000569357 GOLGB1Q14789 3259 aaKnown RBP13.15□□□□□ -0.3
TCF4-243ENST00000569357 IGSF1Q8N6C5 1336 aa13.14□□□□□ -0.31
TCF4-243ENST00000569357 PRELPP51888 382 aa13.14□□□□□ -0.31
TCF4-243ENST00000569357 COL24A1Q17RW2 1714 aa13.13□□□□□ -0.31
TCF4-243ENST00000569357 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
TCF4-243ENST00000569357 HTRA3P83110 453 aa13.13□□□□□ -0.31
TCF4-243ENST00000569357 QSER1Q2KHR3 1735 aa13.13□□□□□ -0.31
TCF4-243ENST00000569357 TTC21AQ8NDW8 1320 aa13.13□□□□□ -0.31
TCF4-243ENST00000569357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.12□□□□□ -0.31
TCF4-243ENST00000569357 LTV1Q96GA3 475 aaPredicted RBP13.12□□□□□ -0.31
TCF4-243ENST00000569357 KLRG1Q96E93 195 aa13.11□□□□□ -0.31
TCF4-243ENST00000569357 TUBGCP6Q96RT7 1819 aa13.11□□□□□ -0.31
TCF4-243ENST00000569357 EVC2Q86UK5 1308 aa13.11□□□□□ -0.31
TCF4-243ENST00000569357 ANKRD36BQ8N2N9 1353 aa13.1□□□□□ -0.31
TCF4-243ENST00000569357 NFAT5O94916 1531 aa13.1□□□□□ -0.31
TCF4-243ENST00000569357 QRICH2Q9H0J4 1663 aa13.1□□□□□ -0.31
TCF4-243ENST00000569357 NMRK2Q9NPI5 230 aa13.1□□□□□ -0.31
TCF4-243ENST00000569357 USP47Q96K76 1375 aa13.09□□□□□ -0.31
TCF4-243ENST00000569357 C16orf71Q8IYS4 520 aaPredicted RBP13.09□□□□□ -0.31
TCF4-243ENST00000569357 FLAD1Q8NFF5 587 aa13.09□□□□□ -0.31
TCF4-243ENST00000569357 KTN1Q86UP2 1357 aaKnown RBP13.08□□□□□ -0.31
TCF4-243ENST00000569357 RAB3GAP2Q9H2M9 1393 aa13.08□□□□□ -0.31
TCF4-243ENST00000569357 PHF14O94880 888 aa13.07□□□□□ -0.32
TCF4-243ENST00000569357 NME9Q86XW9 330 aa13.07□□□□□ -0.32
TCF4-243ENST00000569357 NSD2O96028 1365 aa13.07□□□□□ -0.32
TCF4-243ENST00000569357 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
TCF4-243ENST00000569357 JMYQ8N9B5 988 aa13.06□□□□□ -0.32
TCF4-243ENST00000569357 ARHGAP27Q6ZUM4 889 aa13.05□□□□□ -0.32
TCF4-243ENST00000569357 SMIM5Q71RC9 77 aa13.05□□□□□ -0.32
TCF4-243ENST00000569357 ZCRB1Q8TBF4 217 aaKnown RBP13.05□□□□□ -0.32
TCF4-243ENST00000569357 AK7Q96M32 723 aa13.05□□□□□ -0.32
TCF4-243ENST00000569357 BCS1LQ9Y276 419 aa13.05□□□□□ -0.32
TCF4-243ENST00000569357 RBM46Q8TBY0 533 aaKnown RBP13.04□□□□□ -0.32
TCF4-243ENST00000569357 LY75O60449 1722 aa13.03□□□□□ -0.32
TCF4-243ENST00000569357 WDR90Q96KV7 1748 aa13.03□□□□□ -0.32
TCF4-243ENST00000569357 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.33
TCF4-243ENST00000569357 DOT1LQ8TEK3 1739 aa13.02□□□□□ -0.33
TCF4-243ENST00000569357 KIAA1210Q9ULL0 1709 aa13.02□□□□□ -0.33
TCF4-243ENST00000569357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.01□□□□□ -0.33
TCF4-243ENST00000569357 CD44P16070 742 aaKnown RBP13.01□□□□□ -0.33
TCF4-243ENST00000569357 FSTL1Q12841 308 aa13.01□□□□□ -0.33
TCF4-243ENST00000569357 MPRIPQ6WCQ1 1025 aa13.01□□□□□ -0.33
TCF4-243ENST00000569357 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
TCF4-243ENST00000569357 IP6K1Q92551 441 aa13.01□□□□□ -0.33
TCF4-243ENST00000569357 USP31Q70CQ4 1352 aa13.01□□□□□ -0.33
TCF4-243ENST00000569357 PALLDQ8WX93 1383 aa13□□□□□ -0.33
TCF4-243ENST00000569357 HSPA1AP0DMV8 641 aaKnown RBP13□□□□□ -0.33
TCF4-243ENST00000569357 HSPA1BP0DMV9 641 aaKnown RBP13□□□□□ -0.33
TCF4-243ENST00000569357 TMC1Q8TDI8 760 aa13□□□□□ -0.33
TCF4-243ENST00000569357 A0A0G2JLW4 131 aa12.99□□□□□ -0.33
TCF4-243ENST00000569357 PLSCR2Q9NRY7 297 aa12.99□□□□□ -0.33
TCF4-243ENST00000569357 LTN1O94822 1766 aa12.99□□□□□ -0.33
TCF4-243ENST00000569357 FCHSD2O94868 740 aa12.98□□□□□ -0.33
TCF4-243ENST00000569357 C9orf131Q5VYM1 1079 aa12.98□□□□□ -0.33
TCF4-243ENST00000569357 RRAGCQ9HB90 399 aa12.98□□□□□ -0.33
TCF4-243ENST00000569357 SLC34A2O95436 690 aa12.97□□□□□ -0.33
TCF4-243ENST00000569357 MMP10P09238 476 aa12.97□□□□□ -0.33
TCF4-243ENST00000569357 AMPHP49418 695 aa12.97□□□□□ -0.33
TCF4-243ENST00000569357 HDGFL2Q7Z4V5 671 aaPredicted RBP12.97□□□□□ -0.33
TCF4-243ENST00000569357 C5P01031 1676 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms