RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 SWI5Q1ZZU3 235 aa9.95□□□□□ -0.82
UBR1-208ENST00000569066 INTS6LQ5JSJ4 861 aaKnown RBP9.95□□□□□ -0.82
UBR1-208ENST00000569066 OCLNQ16625 522 aa9.94□□□□□ -0.82
UBR1-208ENST00000569066 ERVH48-1M5A8F1 160 aa9.94□□□□□ -0.82
UBR1-208ENST00000569066 ITGBL1O95965 494 aaPredicted RBP9.94□□□□□ -0.82
UBR1-208ENST00000569066 ARID5BQ14865 1188 aa9.94□□□□□ -0.82
UBR1-208ENST00000569066 RNF20Q5VTR2 975 aa9.94□□□□□ -0.82
UBR1-208ENST00000569066 PPP1R18Q6NYC8 613 aa9.94□□□□□ -0.82
UBR1-208ENST00000569066 TSEN2Q8NCE0 465 aaKnown RBP9.94□□□□□ -0.82
UBR1-208ENST00000569066 TLL2Q9Y6L7 1015 aa9.94□□□□□ -0.82
UBR1-208ENST00000569066 SEC13P55735 322 aa9.93□□□□□ -0.82
UBR1-208ENST00000569066 VASH1Q7L8A9 365 aaPredicted RBP9.93□□□□□ -0.82
UBR1-208ENST00000569066 CAPN12Q6ZSI9 719 aa9.93□□□□□ -0.82
UBR1-208ENST00000569066 ANKLE1Q8NAG6 615 aa9.93□□□□□ -0.82
UBR1-208ENST00000569066 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
UBR1-208ENST00000569066 PURBQ96QR8 312 aaKnown RBP9.93□□□□□ -0.82
UBR1-208ENST00000569066 PCDH10Q9P2E7 1040 aa9.93□□□□□ -0.82
UBR1-208ENST00000569066 RBM25P49756 843 aaKnown RBP9.92□□□□□ -0.82
UBR1-208ENST00000569066 TMPRSS4Q9NRS4 437 aa9.92□□□□□ -0.82
UBR1-208ENST00000569066 USP4Q13107 963 aa9.91□□□□□ -0.82
UBR1-208ENST00000569066 EMID1Q96A84 441 aaPredicted RBP9.91□□□□□ -0.82
UBR1-208ENST00000569066 FSHRP23945 695 aa9.91□□□□□ -0.82
UBR1-208ENST00000569066 SEPT12Q8IYM1 358 aa9.91□□□□□ -0.82
UBR1-208ENST00000569066 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.91□□□□□ -0.82
UBR1-208ENST00000569066 MKNK1Q9BUB5 465 aa9.91□□□□□ -0.82
UBR1-208ENST00000569066 ARID4AP29374 1257 aaPredicted RBP9.9□□□□□ -0.82
UBR1-208ENST00000569066 EHBP1Q8NDI1 1231 aa9.9□□□□□ -0.82
UBR1-208ENST00000569066 HINFPQ9BQA5 517 aa9.9□□□□□ -0.83
UBR1-208ENST00000569066 VARSP26640 1264 aaKnown RBP9.89□□□□□ -0.83
UBR1-208ENST00000569066 RNF166Q96A37 237 aaPredicted RBP9.89□□□□□ -0.83
UBR1-208ENST00000569066 ANO2Q9NQ90 1003 aa9.89□□□□□ -0.83
UBR1-208ENST00000569066 CYLDQ9NQC7 956 aa9.89□□□□□ -0.83
UBR1-208ENST00000569066 CXXC1Q9P0U4 656 aaPredicted RBP9.89□□□□□ -0.83
UBR1-208ENST00000569066 WNT7BP56706 349 aa9.88□□□□□ -0.83
UBR1-208ENST00000569066 ZNF211Q13398 564 aaPredicted RBP9.88□□□□□ -0.83
UBR1-208ENST00000569066 HCSTQ9UBK5 93 aa9.88□□□□□ -0.83
UBR1-208ENST00000569066 SOWAHDA6NJG2 315 aa9.87□□□□□ -0.83
UBR1-208ENST00000569066 GRM5P41594 1212 aa9.87□□□□□ -0.83
UBR1-208ENST00000569066 RC3H1Q5TC82 1133 aaKnown RBP9.87□□□□□ -0.83
UBR1-208ENST00000569066 SEPT3Q9UH03 358 aa9.87□□□□□ -0.83
UBR1-208ENST00000569066 CDV3Q9UKY7 258 aaKnown RBP9.87□□□□□ -0.83
UBR1-208ENST00000569066 RBM19Q9Y4C8 960 aaKnown RBP9.87□□□□□ -0.83
UBR1-208ENST00000569066 TMEM229AB2RXF0 380 aa9.87□□□□□ -0.83
UBR1-208ENST00000569066 MTMR3Q13615 1198 aa9.87□□□□□ -0.83
UBR1-208ENST00000569066 NOM1Q5C9Z4 860 aaKnown RBP9.87□□□□□ -0.83
UBR1-208ENST00000569066 LIAT1Q6ZQX7 453 aa9.87□□□□□ -0.83
UBR1-208ENST00000569066 MAP4K5Q9Y4K4 846 aa9.87□□□□□ -0.83
UBR1-208ENST00000569066 ABL1P00519 1130 aa9.86□□□□□ -0.83
UBR1-208ENST00000569066 OSBPL3Q9H4L5 887 aa9.86□□□□□ -0.83
UBR1-208ENST00000569066 FKBP5Q13451 457 aaPredicted RBP9.86□□□□□ -0.83
UBR1-208ENST00000569066 ZNF784Q8NCA9 323 aaPredicted RBP9.86□□□□□ -0.83
UBR1-208ENST00000569066 SIRT1Q96EB6 747 aa9.86□□□□□ -0.83
UBR1-208ENST00000569066 ZNF358Q9NW07 568 aa9.86□□□□□ -0.83
UBR1-208ENST00000569066 SCNN1DP51172 638 aa9.85□□□□□ -0.83
UBR1-208ENST00000569066 ERVK-9P63128 1117 aa9.85□□□□□ -0.83
UBR1-208ENST00000569066 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.85□□□□□ -0.83
UBR1-208ENST00000569066 MYCP01106 439 aaPredicted RBP9.85□□□□□ -0.83
UBR1-208ENST00000569066 TAS1R3Q7RTX0 852 aa9.84□□□□□ -0.83
UBR1-208ENST00000569066 NR3C2P08235 984 aa9.84□□□□□ -0.83
UBR1-208ENST00000569066 GGCXP38435 758 aa9.84□□□□□ -0.83
UBR1-208ENST00000569066 WEE1P30291 646 aa9.83□□□□□ -0.84
UBR1-208ENST00000569066 C1orf216Q8TAB5 229 aa9.83□□□□□ -0.84
UBR1-208ENST00000569066 CDK15Q96Q40 435 aa9.83□□□□□ -0.84
UBR1-208ENST00000569066 CC2D2BQ6DHV5 1058 aa9.82□□□□□ -0.84
UBR1-208ENST00000569066 SPNS2Q8IVW8 549 aa9.82□□□□□ -0.84
UBR1-208ENST00000569066 TNS4Q8IZW8 715 aa9.82□□□□□ -0.84
UBR1-208ENST00000569066 RAB6BQ9NRW1 208 aa9.82□□□□□ -0.84
UBR1-208ENST00000569066 BIN2Q9UBW5 565 aaPredicted RBP9.82□□□□□ -0.84
UBR1-208ENST00000569066 H3BRB1 525 aa9.82□□□□□ -0.84
UBR1-208ENST00000569066 SIAH2O43255 324 aa9.82□□□□□ -0.84
UBR1-208ENST00000569066 DNAJC14Q6Y2X3 702 aaPredicted RBP9.82□□□□□ -0.84
UBR1-208ENST00000569066 TUT1Q9H6E5 874 aaKnown RBP9.82□□□□□ -0.84
UBR1-208ENST00000569066 ETNK1Q9HBU6 452 aa9.81□□□□□ -0.84
UBR1-208ENST00000569066 SERTAD1Q9UHV2 236 aa9.81□□□□□ -0.84
UBR1-208ENST00000569066 LILRA1O75019 489 aa9.81□□□□□ -0.84
UBR1-208ENST00000569066 RPIAP49247 311 aa9.81□□□□□ -0.84
UBR1-208ENST00000569066 GDF10P55107 478 aa9.81□□□□□ -0.84
UBR1-208ENST00000569066 NAA30Q147X3 362 aaPredicted RBP9.81□□□□□ -0.84
UBR1-208ENST00000569066 PPP1R26Q5T8A7 1209 aaPredicted RBP9.81□□□□□ -0.84
UBR1-208ENST00000569066 MRGPRX2Q96LB1 330 aa9.81□□□□□ -0.84
UBR1-208ENST00000569066 TBCELQ5QJ74 424 aa9.8□□□□□ -0.84
UBR1-208ENST00000569066 GTF3C2Q8WUA4 911 aaPredicted RBP9.8□□□□□ -0.84
UBR1-208ENST00000569066 DNMT3AQ9Y6K1 912 aaPredicted RBP9.8□□□□□ -0.84
UBR1-208ENST00000569066 ADD1P35611 737 aaKnown RBP9.8□□□□□ -0.84
UBR1-208ENST00000569066 TSPAN10Q9H1Z9 355 aaPredicted RBP9.8□□□□□ -0.84
UBR1-208ENST00000569066 CD2BP2O95400 341 aaKnown RBP9.79□□□□□ -0.84
UBR1-208ENST00000569066 ADH1CP00326 375 aa9.79□□□□□ -0.84
UBR1-208ENST00000569066 C21orf2O43822 256 aa9.79□□□□□ -0.84
UBR1-208ENST00000569066 EPHA4P54764 986 aa9.78□□□□□ -0.84
UBR1-208ENST00000569066 CCDC116Q8IYX3 515 aa9.78□□□□□ -0.84
UBR1-208ENST00000569066 SCG3Q8WXD2 468 aaKnown RBP9.78□□□□□ -0.84
UBR1-208ENST00000569066 UNCXA6NJT0 531 aa9.77□□□□□ -0.85
UBR1-208ENST00000569066 ECM1Q16610 540 aa9.77□□□□□ -0.85
UBR1-208ENST00000569066 CHMP7Q8WUX9 453 aaPredicted RBP9.77□□□□□ -0.85
UBR1-208ENST00000569066 ESF1Q9H501 851 aaKnown RBP9.77□□□□□ -0.85
UBR1-208ENST00000569066 INHAP05111 366 aa9.76□□□□□ -0.85
UBR1-208ENST00000569066 MARSP56192 900 aaKnown RBP9.76□□□□□ -0.85
UBR1-208ENST00000569066 M0R2N6 131 aa9.76□□□□□ -0.85
UBR1-208ENST00000569066 ARHGEF10LQ9HCE6 1279 aa9.76□□□□□ -0.85
UBR1-208ENST00000569066 USP3Q9Y6I4 520 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms