RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 TNNT2P45379 298 aaPredicted RBP15.57■□□□□ 0.08
SNAPC5-208ENST00000568875 AMER1Q5JTC6 1135 aaPredicted RBP15.57■□□□□ 0.08
SNAPC5-208ENST00000568875 PRKRIP1Q9H875 184 aaPredicted RBP15.57■□□□□ 0.08
SNAPC5-208ENST00000568875 SMG6Q86US8 1419 aaKnown RBP15.55■□□□□ 0.08
SNAPC5-208ENST00000568875 PLSCR1O15162 318 aa15.55■□□□□ 0.08
SNAPC5-208ENST00000568875 USHBP1Q8N6Y0 703 aa15.55■□□□□ 0.08
SNAPC5-208ENST00000568875 PARD3Q8TEW0 1356 aa15.55■□□□□ 0.08
SNAPC5-208ENST00000568875 ANKRD26Q9UPS8 1709 aa15.55■□□□□ 0.08
SNAPC5-208ENST00000568875 MORC1Q86VD1 984 aa15.54■□□□□ 0.08
SNAPC5-208ENST00000568875 KCNQ2O43526 872 aa15.54■□□□□ 0.08
SNAPC5-208ENST00000568875 ERICH6BQ5W0A0 696 aa15.54■□□□□ 0.08
SNAPC5-208ENST00000568875 ZCRB1Q8TBF4 217 aaKnown RBP15.54■□□□□ 0.08
SNAPC5-208ENST00000568875 DDX54Q8TDD1 881 aaKnown RBP15.54■□□□□ 0.08
SNAPC5-208ENST00000568875 KAT6BQ8WYB5 2073 aa15.52■□□□□ 0.08
SNAPC5-208ENST00000568875 MEGF6O75095 1541 aa15.52■□□□□ 0.08
SNAPC5-208ENST00000568875 HNRNPUQ00839 825 aaKnown RBP eCLIP15.52■□□□□ 0.08
SNAPC5-208ENST00000568875 RAPGEF4Q8WZA2 1011 aa15.52■□□□□ 0.08
SNAPC5-208ENST00000568875 ACSBG1Q96GR2 724 aa15.51■□□□□ 0.07
SNAPC5-208ENST00000568875 EYA1Q99502 592 aa15.51■□□□□ 0.07
SNAPC5-208ENST00000568875 TSHZ2Q9NRE2 1034 aa15.51■□□□□ 0.07
SNAPC5-208ENST00000568875 PROM2Q8N271 834 aa15.51■□□□□ 0.07
SNAPC5-208ENST00000568875 NCAPD2Q15021 1401 aa15.5■□□□□ 0.07
SNAPC5-208ENST00000568875 TATP17735 454 aaPredicted RBP15.5■□□□□ 0.07
SNAPC5-208ENST00000568875 EIF4A2Q14240 407 aaKnown RBP15.5■□□□□ 0.07
SNAPC5-208ENST00000568875 PSDA5PKW4 1024 aaPredicted RBP15.48■□□□□ 0.07
SNAPC5-208ENST00000568875 R3HDM1Q15032 1099 aaKnown RBP15.48■□□□□ 0.07
SNAPC5-208ENST00000568875 RREB1Q92766 1687 aa15.47■□□□□ 0.07
SNAPC5-208ENST00000568875 SHANK3Q9BYB0 1731 aa15.47■□□□□ 0.07
SNAPC5-208ENST00000568875 CC2D1BQ5T0F9 858 aaKnown RBP15.46■□□□□ 0.07
SNAPC5-208ENST00000568875 NPC1L1Q9UHC9 1359 aa15.46■□□□□ 0.07
SNAPC5-208ENST00000568875 NHSQ6T4R5 1651 aa15.46■□□□□ 0.07
SNAPC5-208ENST00000568875 RGPD3A6NKT7 1758 aaPredicted RBP15.46■□□□□ 0.07
SNAPC5-208ENST00000568875 RGPD4Q7Z3J3 1758 aa15.46■□□□□ 0.07
SNAPC5-208ENST00000568875 CYP27B1O15528 508 aa15.46■□□□□ 0.06
SNAPC5-208ENST00000568875 PRIM1P49642 420 aaKnown RBP15.46■□□□□ 0.06
SNAPC5-208ENST00000568875 TXNRD1Q16881 649 aa15.46■□□□□ 0.06
SNAPC5-208ENST00000568875 NBPF14Q5TI25 921 aa15.46■□□□□ 0.06
SNAPC5-208ENST00000568875 ZBED9Q6R2W3 1325 aa15.46■□□□□ 0.06
SNAPC5-208ENST00000568875 IGSF1Q8N6C5 1336 aa15.45■□□□□ 0.06
SNAPC5-208ENST00000568875 MRS2Q9HD23 443 aa15.45■□□□□ 0.06
SNAPC5-208ENST00000568875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNAPC5-208ENST00000568875 NUP188Q5SRE5 1749 aa15.44■□□□□ 0.06
SNAPC5-208ENST00000568875 MTHFSP49914 203 aa15.44■□□□□ 0.06
SNAPC5-208ENST00000568875 PCDH11XQ9BZA7 1347 aa15.43■□□□□ 0.06
SNAPC5-208ENST00000568875 PCDH11YQ9BZA8 1340 aa15.43■□□□□ 0.06
SNAPC5-208ENST00000568875 IL13P35225 146 aa15.43■□□□□ 0.06
SNAPC5-208ENST00000568875 SPG7Q9UQ90 795 aa15.43■□□□□ 0.06
SNAPC5-208ENST00000568875 BTAF1O14981 1849 aa15.42■□□□□ 0.06
SNAPC5-208ENST00000568875 NKX1-1Q15270 411 aaPredicted RBP15.42■□□□□ 0.06
SNAPC5-208ENST00000568875 SYTL4Q96C24 671 aaPredicted RBP15.42■□□□□ 0.06
SNAPC5-208ENST00000568875 CCDC184Q52MB2 194 aa15.41■□□□□ 0.06
SNAPC5-208ENST00000568875 ANO8Q9HCE9 1232 aaPredicted RBP15.41■□□□□ 0.06
SNAPC5-208ENST00000568875 PKD1L3Q7Z443 1732 aa15.4■□□□□ 0.06
SNAPC5-208ENST00000568875 LRRC4BQ9NT99 713 aa15.4■□□□□ 0.06
SNAPC5-208ENST00000568875 PLEKHG2Q9H7P9 1386 aa15.39■□□□□ 0.05
SNAPC5-208ENST00000568875 CNGB1Q14028 1251 aaPredicted RBP15.39■□□□□ 0.05
SNAPC5-208ENST00000568875 AEBP1Q8IUX7 1158 aa15.39■□□□□ 0.05
SNAPC5-208ENST00000568875 IFNL2Q8IZJ0 200 aa15.38■□□□□ 0.05
SNAPC5-208ENST00000568875 DOT1LQ8TEK3 1739 aa15.38■□□□□ 0.05
SNAPC5-208ENST00000568875 PHKG2P15735 406 aa15.37■□□□□ 0.05
SNAPC5-208ENST00000568875 SLC27A3Q5K4L6 730 aa15.37■□□□□ 0.05
SNAPC5-208ENST00000568875 SULT6B1Q6IMI4 303 aa15.37■□□□□ 0.05
SNAPC5-208ENST00000568875 SLC15A2Q16348 729 aa15.37■□□□□ 0.05
SNAPC5-208ENST00000568875 KDRP35968 1356 aa15.37■□□□□ 0.05
SNAPC5-208ENST00000568875 PLEKHO1Q53GL0 409 aaPredicted RBP15.36■□□□□ 0.05
SNAPC5-208ENST00000568875 MPRIPQ6WCQ1 1025 aa15.36■□□□□ 0.05
SNAPC5-208ENST00000568875 FAM9BQ8IZU0 186 aa15.36■□□□□ 0.05
SNAPC5-208ENST00000568875 DIAPH1O60610 1272 aaKnown RBP15.35■□□□□ 0.05
SNAPC5-208ENST00000568875 AMOTQ4VCS5 1084 aa15.35■□□□□ 0.05
SNAPC5-208ENST00000568875 STK32BQ9NY57 414 aa15.35■□□□□ 0.05
SNAPC5-208ENST00000568875 PIGBQ92521 554 aa15.34■□□□□ 0.05
SNAPC5-208ENST00000568875 PDGFDQ9GZP0 370 aaPredicted RBP15.34■□□□□ 0.05
SNAPC5-208ENST00000568875 KCNQ4P56696 695 aa15.34■□□□□ 0.05
SNAPC5-208ENST00000568875 LRP5O75197 1615 aa15.33■□□□□ 0.04
SNAPC5-208ENST00000568875 TOGARAM1Q9Y4F4 1720 aa15.32■□□□□ 0.04
SNAPC5-208ENST00000568875 RALBP1Q15311 655 aa15.32■□□□□ 0.04
SNAPC5-208ENST00000568875 AKT1S1Q96B36 256 aa15.32■□□□□ 0.04
SNAPC5-208ENST00000568875 PPP4R2Q9NY27 417 aa15.32■□□□□ 0.04
SNAPC5-208ENST00000568875 ITGB4P16144 1822 aa15.32■□□□□ 0.04
SNAPC5-208ENST00000568875 LY75O60449 1722 aa15.32■□□□□ 0.04
SNAPC5-208ENST00000568875 HSP90AB1P08238 724 aaKnown RBP15.31■□□□□ 0.04
SNAPC5-208ENST00000568875 HMOX1P09601 288 aa15.31■□□□□ 0.04
SNAPC5-208ENST00000568875 ZNF827Q17R98 1081 aa15.31■□□□□ 0.04
SNAPC5-208ENST00000568875 ZNF530Q6P9A1 599 aaPredicted RBP15.31■□□□□ 0.04
SNAPC5-208ENST00000568875 PAPPAQ13219 1627 aa15.31■□□□□ 0.04
SNAPC5-208ENST00000568875 COL3A1P02461 1466 aaPredicted RBP15.31■□□□□ 0.04
SNAPC5-208ENST00000568875 PPP2R1AP30153 589 aa15.31■□□□□ 0.04
SNAPC5-208ENST00000568875 DCAF5Q96JK2 942 aa15.31■□□□□ 0.04
SNAPC5-208ENST00000568875 CCNL1Q9UK58 526 aaPredicted RBP15.31■□□□□ 0.04
SNAPC5-208ENST00000568875 ERVV-2B6SEH9 535 aa15.3■□□□□ 0.04
SNAPC5-208ENST00000568875 SMARCC1Q92922 1105 aaPredicted RBP15.3■□□□□ 0.04
SNAPC5-208ENST00000568875 TMOD3Q9NYL9 352 aa15.3■□□□□ 0.04
SNAPC5-208ENST00000568875 SPON1Q9HCB6 807 aa15.29■□□□□ 0.04
SNAPC5-208ENST00000568875 PALLDQ8WX93 1383 aa15.29■□□□□ 0.04
SNAPC5-208ENST00000568875 PNISRQ8TF01 805 aaKnown RBP15.29■□□□□ 0.04
SNAPC5-208ENST00000568875 ASAP1Q9ULH1 1129 aa15.29■□□□□ 0.04
SNAPC5-208ENST00000568875 CASZ1Q86V15 1759 aa15.28■□□□□ 0.04
SNAPC5-208ENST00000568875 C1orf141Q5JVX7 400 aa15.28■□□□□ 0.04
SNAPC5-208ENST00000568875 CFAP53Q96M91 514 aa15.27■□□□□ 0.04
SNAPC5-208ENST00000568875 ATG3Q9NT62 314 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms