RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 SLFN5Q08AF3 891 aa13.64□□□□□ -0.23
CDH11-214ENST00000568340 DUSP27Q5VZP5 1158 aa13.64□□□□□ -0.23
CDH11-214ENST00000568340 POTEAQ6S8J7 498 aa13.64□□□□□ -0.23
CDH11-214ENST00000568340 SALL2Q9Y467 1007 aaPredicted RBP13.64□□□□□ -0.23
CDH11-214ENST00000568340 IL16Q14005 1332 aa13.64□□□□□ -0.23
CDH11-214ENST00000568340 RIPK4P57078 832 aa13.63□□□□□ -0.23
CDH11-214ENST00000568340 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
CDH11-214ENST00000568340 KDM6AO15550 1401 aaPredicted RBP13.63□□□□□ -0.23
CDH11-214ENST00000568340 MAP3K5Q99683 1374 aa13.62□□□□□ -0.23
CDH11-214ENST00000568340 ZNF853P0CG23 659 aa13.62□□□□□ -0.23
CDH11-214ENST00000568340 GAS2L2Q8NHY3 880 aa13.62□□□□□ -0.23
CDH11-214ENST00000568340 NLRP2Q9NX02 1062 aa13.62□□□□□ -0.23
CDH11-214ENST00000568340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.62□□□□□ -0.23
CDH11-214ENST00000568340 THSD7AQ9UPZ6 1657 aa13.62□□□□□ -0.23
CDH11-214ENST00000568340 SIPA1L3O60292 1781 aaPredicted RBP13.61□□□□□ -0.23
CDH11-214ENST00000568340 GOLGA2Q08379 1002 aa13.61□□□□□ -0.23
CDH11-214ENST00000568340 THUMPD2Q9BTF0 503 aaKnown RBP13.61□□□□□ -0.23
CDH11-214ENST00000568340 GLI3P10071 1580 aa13.61□□□□□ -0.23
CDH11-214ENST00000568340 SPATA31A1Q5TZJ5 1347 aa13.61□□□□□ -0.23
CDH11-214ENST00000568340 SPATA31A5Q5VU36 1347 aa13.61□□□□□ -0.23
CDH11-214ENST00000568340 SPATA31A7Q8IWB4 1347 aa13.61□□□□□ -0.23
CDH11-214ENST00000568340 NUTM2BA6NNL0 878 aaPredicted RBP13.6□□□□□ -0.23
CDH11-214ENST00000568340 NUTM2EB1AL46 878 aaPredicted RBP13.6□□□□□ -0.23
CDH11-214ENST00000568340 ATRNO75882 1429 aa13.6□□□□□ -0.23
CDH11-214ENST00000568340 CENPBP07199 599 aaPredicted RBP13.6□□□□□ -0.23
CDH11-214ENST00000568340 NEUROD2Q15784 382 aa13.6□□□□□ -0.23
CDH11-214ENST00000568340 TNS2Q63HR2 1409 aa13.6□□□□□ -0.23
CDH11-214ENST00000568340 NUTM2AQ8IVF1 878 aaPredicted RBP13.6□□□□□ -0.23
CDH11-214ENST00000568340 STRN4Q9NRL3 753 aa13.6□□□□□ -0.23
CDH11-214ENST00000568340 TOGARAM1Q9Y4F4 1720 aa13.6□□□□□ -0.23
CDH11-214ENST00000568340 E9PSI1 815 aa13.59□□□□□ -0.23
CDH11-214ENST00000568340 HTATSF1O43719 755 aaKnown RBP13.59□□□□□ -0.23
CDH11-214ENST00000568340 CSB-PGBD3P0DP91 1061 aa13.59□□□□□ -0.23
CDH11-214ENST00000568340 TOM1L2Q6ZVM7 507 aa13.59□□□□□ -0.23
CDH11-214ENST00000568340 CYP27B1O15528 508 aa13.58□□□□□ -0.24
CDH11-214ENST00000568340 DCTN1Q14203 1278 aa13.58□□□□□ -0.24
CDH11-214ENST00000568340 AMOTQ4VCS5 1084 aa13.58□□□□□ -0.24
CDH11-214ENST00000568340 UNC5CLQ8IV45 518 aa13.58□□□□□ -0.24
CDH11-214ENST00000568340 IL17REQ8NFR9 667 aa13.58□□□□□ -0.24
CDH11-214ENST00000568340 FANCIQ9NVI1 1328 aa13.58□□□□□ -0.24
CDH11-214ENST00000568340 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.24
CDH11-214ENST00000568340 LMOD3Q0VAK6 560 aa13.57□□□□□ -0.24
CDH11-214ENST00000568340 VPS72Q15906 364 aa13.57□□□□□ -0.24
CDH11-214ENST00000568340 PLEKHO1Q53GL0 409 aaPredicted RBP13.57□□□□□ -0.24
CDH11-214ENST00000568340 KDM3BQ7LBC6 1761 aa13.57□□□□□ -0.24
CDH11-214ENST00000568340 VIRMAQ69YN4 1812 aaKnown RBP13.57□□□□□ -0.24
CDH11-214ENST00000568340 GNAT3A8MTJ3 354 aa13.56□□□□□ -0.24
CDH11-214ENST00000568340 IL2RBP14784 551 aa13.56□□□□□ -0.24
CDH11-214ENST00000568340 PHKG2P15735 406 aa13.56□□□□□ -0.24
CDH11-214ENST00000568340 TATP17735 454 aaPredicted RBP13.56□□□□□ -0.24
CDH11-214ENST00000568340 AKAP4Q5JQC9 854 aa13.56□□□□□ -0.24
CDH11-214ENST00000568340 ZNF530Q6P9A1 599 aaPredicted RBP13.56□□□□□ -0.24
CDH11-214ENST00000568340 MCM10Q7L590 875 aa13.56□□□□□ -0.24
CDH11-214ENST00000568340 RAPGEF4Q8WZA2 1011 aa13.56□□□□□ -0.24
CDH11-214ENST00000568340 C8orf37Q96NL8 207 aa13.56□□□□□ -0.24
CDH11-214ENST00000568340 IFT57Q9NWB7 429 aa13.56□□□□□ -0.24
CDH11-214ENST00000568340 RNF123Q5XPI4 1314 aa13.56□□□□□ -0.24
CDH11-214ENST00000568340 PAPPAQ13219 1627 aa13.55□□□□□ -0.24
CDH11-214ENST00000568340 NEFMP07197 916 aa13.55□□□□□ -0.24
CDH11-214ENST00000568340 BARGINQ6ZT62 677 aa13.55□□□□□ -0.24
CDH11-214ENST00000568340 THRAP3Q9Y2W1 955 aaKnown RBP13.55□□□□□ -0.24
CDH11-214ENST00000568340 CHL1O00533 1208 aa13.54□□□□□ -0.24
CDH11-214ENST00000568340 EVA1CP58658 441 aa13.54□□□□□ -0.24
CDH11-214ENST00000568340 NKX1-1Q15270 411 aaPredicted RBP13.54□□□□□ -0.24
CDH11-214ENST00000568340 CFAP44Q96MT7 982 aa13.54□□□□□ -0.24
CDH11-214ENST00000568340 TSR2Q969E8 191 aaKnown RBP13.53□□□□□ -0.24
CDH11-214ENST00000568340 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
CDH11-214ENST00000568340 AFF2P51816 1311 aa13.53□□□□□ -0.24
CDH11-214ENST00000568340 PCDH11XQ9BZA7 1347 aa13.53□□□□□ -0.24
CDH11-214ENST00000568340 PCDH11YQ9BZA8 1340 aa13.53□□□□□ -0.24
CDH11-214ENST00000568340 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.25
CDH11-214ENST00000568340 LGR6Q9HBX8 967 aa13.52□□□□□ -0.25
CDH11-214ENST00000568340 SPG7Q9UQ90 795 aa13.52□□□□□ -0.25
CDH11-214ENST00000568340 CALD1Q05682 793 aaKnown RBP13.51□□□□□ -0.25
CDH11-214ENST00000568340 ZCRB1Q8TBF4 217 aaKnown RBP13.51□□□□□ -0.25
CDH11-214ENST00000568340 NGLY1Q96IV0 654 aa13.51□□□□□ -0.25
CDH11-214ENST00000568340 MYH16Q9H6N6 1097 aa13.51□□□□□ -0.25
CDH11-214ENST00000568340 USP21Q9UK80 565 aa13.51□□□□□ -0.25
CDH11-214ENST00000568340 HEG1Q9ULI3 1381 aa13.5□□□□□ -0.25
CDH11-214ENST00000568340 MPRIPQ6WCQ1 1025 aa13.5□□□□□ -0.25
CDH11-214ENST00000568340 IFNL2Q8IZJ0 200 aa13.5□□□□□ -0.25
CDH11-214ENST00000568340 CDCA7Q9BWT1 371 aaPredicted RBP13.5□□□□□ -0.25
CDH11-214ENST00000568340 BABAM1Q9NWV8 329 aa13.5□□□□□ -0.25
CDH11-214ENST00000568340 GNAI1P63096 354 aa13.49□□□□□ -0.25
CDH11-214ENST00000568340 USP35Q9P2H5 1018 aa13.49□□□□□ -0.25
CDH11-214ENST00000568340 UBR2Q8IWV8 1755 aa13.49□□□□□ -0.25
CDH11-214ENST00000568340 ONECUT3O60422 494 aaPredicted RBP13.48□□□□□ -0.25
CDH11-214ENST00000568340 DCAF5Q96JK2 942 aa13.48□□□□□ -0.25
CDH11-214ENST00000568340 KCPQ6ZWJ8 1503 aa13.48□□□□□ -0.25
CDH11-214ENST00000568340 BCL9O00512 1426 aa13.47□□□□□ -0.25
CDH11-214ENST00000568340 DOT1LQ8TEK3 1739 aa13.47□□□□□ -0.25
CDH11-214ENST00000568340 EXOSC9Q06265 439 aaKnown RBP13.47□□□□□ -0.25
CDH11-214ENST00000568340 C1orf141Q5JVX7 400 aa13.47□□□□□ -0.25
CDH11-214ENST00000568340 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
CDH11-214ENST00000568340 CT47B1P0C2W7 299 aaPredicted RBP13.46□□□□□ -0.25
CDH11-214ENST00000568340 TAF7Q15545 349 aaPredicted RBP13.46□□□□□ -0.25
CDH11-214ENST00000568340 KRT24Q2M2I5 525 aa13.46□□□□□ -0.25
CDH11-214ENST00000568340 TSPYL6Q8N831 410 aa13.46□□□□□ -0.25
CDH11-214ENST00000568340 GJD4Q96KN9 370 aaPredicted RBP13.46□□□□□ -0.25
CDH11-214ENST00000568340 SLC52A2Q9HAB3 445 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms