RNA–Protein interactions for RNA: ENST00000568339.5

COX4I1-215, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 2

Gene COX4I1, Length 2,271 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-215ENST00000568339 MVPQ14764 893 aaKnown RBP21.39■■□□□ 1.01
COX4I1-215ENST00000568339 ATF7IPQ6VMQ6 1270 aa21.39■■□□□ 1.01
COX4I1-215ENST00000568339 KRT28Q7Z3Y7 464 aa21.39■■□□□ 1.01
COX4I1-215ENST00000568339 TNNQ9UQP3 1299 aa21.39■■□□□ 1.01
COX4I1-215ENST00000568339 CHL1O00533 1208 aa21.38■■□□□ 1.01
COX4I1-215ENST00000568339 IPO8O15397 1037 aaKnown RBP21.38■■□□□ 1.01
COX4I1-215ENST00000568339 MTHFSDQ2M296 383 aaKnown RBP21.38■■□□□ 1.01
COX4I1-215ENST00000568339 TRIM27P14373 513 aa21.38■■□□□ 1.01
COX4I1-215ENST00000568339 DCTN1Q14203 1278 aa21.38■■□□□ 1.01
COX4I1-215ENST00000568339 CADPS2Q86UW7 1296 aa21.37■■□□□ 1.01
COX4I1-215ENST00000568339 NOB1Q9ULX3 412 aaKnown RBP21.36■■□□□ 1.01
COX4I1-215ENST00000568339 KIAA0232Q92628 1395 aa21.36■■□□□ 1.01
COX4I1-215ENST00000568339 GCP02774 474 aa21.35■■□□□ 1.01
COX4I1-215ENST00000568339 ARHGEF25Q86VW2 580 aa21.35■■□□□ 1.01
COX4I1-215ENST00000568339 FTSJ3Q8IY81 847 aaKnown RBP21.35■■□□□ 1.01
COX4I1-215ENST00000568339 ARHGAP45Q92619 1136 aa21.35■■□□□ 1.01
COX4I1-215ENST00000568339 NCAPD2Q15021 1401 aa21.35■■□□□ 1.01
COX4I1-215ENST00000568339 CAMTA1Q9Y6Y1 1673 aa21.35■■□□□ 1.01
COX4I1-215ENST00000568339 TSPYL6Q8N831 410 aa21.35■■□□□ 1.01
COX4I1-215ENST00000568339 TWISTNBQ3B726 338 aaPredicted RBP21.34■■□□□ 1.01
COX4I1-215ENST00000568339 MRPL50Q8N5N7 158 aaKnown RBP21.34■■□□□ 1.01
COX4I1-215ENST00000568339 MSH6P52701 1360 aa21.34■■□□□ 1.01
COX4I1-215ENST00000568339 MCM10Q7L590 875 aa21.34■■□□□ 1.01
COX4I1-215ENST00000568339 HAP1P54257 671 aaPredicted RBP21.33■■□□□ 1.01
COX4I1-215ENST00000568339 XPCQ01831 940 aaPredicted RBP21.32■■□□□ 1
COX4I1-215ENST00000568339 C8orf58Q8NAV2 365 aa21.32■■□□□ 1
COX4I1-215ENST00000568339 MED1Q15648 1581 aaPredicted RBP21.32■■□□□ 1
COX4I1-215ENST00000568339 DDX19BQ9UMR2 479 aa21.32■■□□□ 1
COX4I1-215ENST00000568339 RGPD2P0DJD1 1756 aa21.32■■□□□ 1
COX4I1-215ENST00000568339 RTF1Q92541 710 aaKnown RBP21.31■■□□□ 1
COX4I1-215ENST00000568339 IGHDP01880 384 aa21.3■■□□□ 1
COX4I1-215ENST00000568339 NPHP3Q7Z494 1330 aa21.3■■□□□ 1
COX4I1-215ENST00000568339 PXDNQ92626 1479 aa21.29■■□□□ 1
COX4I1-215ENST00000568339 LTV1Q96GA3 475 aaPredicted RBP21.29■■□□□ 1
COX4I1-215ENST00000568339 CRYBG1Q9Y4K1 1723 aa21.29■■□□□ 1
COX4I1-215ENST00000568339 MAP3K5Q99683 1374 aa21.29■■□□□ 1
COX4I1-215ENST00000568339 GNAT3A8MTJ3 354 aa21.29■■□□□ 1
COX4I1-215ENST00000568339 NBPF6Q5VWK0 638 aa21.28■■□□□ 1
COX4I1-215ENST00000568339 NBPF4Q96M43 638 aa21.28■■□□□ 1
COX4I1-215ENST00000568339 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.28■■□□□ 1
COX4I1-215ENST00000568339 PCDHB15Q9Y5E8 787 aa21.28■■□□□ 1
COX4I1-215ENST00000568339 ABCC6O95255 1503 aa21.28■■□□□ 1
COX4I1-215ENST00000568339 BABAM1Q9NWV8 329 aa21.27■■□□□ 1
COX4I1-215ENST00000568339 LMO7Q8WWI1 1683 aa21.27■■□□□ 1
COX4I1-215ENST00000568339 TNS3Q68CZ2 1445 aa21.27■□□□□ 0.99
COX4I1-215ENST00000568339 TMEM57Q8N5G2 664 aa21.26■□□□□ 0.99
COX4I1-215ENST00000568339 ELL2O00472 640 aaPredicted RBP21.25■□□□□ 0.99
COX4I1-215ENST00000568339 COL18A1P39060 1754 aa21.24■□□□□ 0.99
COX4I1-215ENST00000568339 RGPD5Q99666 1765 aa21.24■□□□□ 0.99
COX4I1-215ENST00000568339 ABCC4O15439 1325 aa21.24■□□□□ 0.99
COX4I1-215ENST00000568339 ITPRIPQ8IWB1 547 aa21.24■□□□□ 0.99
COX4I1-215ENST00000568339 RWDD1Q9H446 243 aaPredicted RBP21.24■□□□□ 0.99
COX4I1-215ENST00000568339 BRPF3Q9ULD4 1205 aa21.24■□□□□ 0.99
COX4I1-215ENST00000568339 GSE1Q14687 1217 aa21.24■□□□□ 0.99
COX4I1-215ENST00000568339 LMOD2Q6P5Q4 547 aa21.24■□□□□ 0.99
COX4I1-215ENST00000568339 ZBTB40Q9NUA8 1239 aa21.23■□□□□ 0.99
COX4I1-215ENST00000568339 USHBP1Q8N6Y0 703 aa21.22■□□□□ 0.99
COX4I1-215ENST00000568339 API5Q9BZZ5 524 aaKnown RBP21.22■□□□□ 0.99
COX4I1-215ENST00000568339 CHMP4BQ9H444 224 aaKnown RBP21.22■□□□□ 0.99
COX4I1-215ENST00000568339 SOS1Q07889 1333 aaPredicted RBP21.22■□□□□ 0.99
COX4I1-215ENST00000568339 CEMIPQ8WUJ3 1361 aa21.22■□□□□ 0.99
COX4I1-215ENST00000568339 TSPYL4Q9UJ04 414 aa21.22■□□□□ 0.99
COX4I1-215ENST00000568339 IL17REQ8NFR9 667 aa21.21■□□□□ 0.99
COX4I1-215ENST00000568339 ANKRD24Q8TF21 1146 aa21.21■□□□□ 0.99
COX4I1-215ENST00000568339 FAM208AQ9UK61 1670 aaKnown RBP21.21■□□□□ 0.99
COX4I1-215ENST00000568339 SPATA31A3Q5VYP0 1347 aa21.21■□□□□ 0.99
COX4I1-215ENST00000568339 HDAC1Q13547 482 aaPredicted RBP21.21■□□□□ 0.99
COX4I1-215ENST00000568339 SKAP1Q86WV1 359 aa21.21■□□□□ 0.99
COX4I1-215ENST00000568339 DDRGK1Q96HY6 314 aa21.21■□□□□ 0.99
COX4I1-215ENST00000568339 AMOTQ4VCS5 1084 aa21.19■□□□□ 0.98
COX4I1-215ENST00000568339 UBE2Q2Q8WVN8 375 aa21.19■□□□□ 0.98
COX4I1-215ENST00000568339 AXIN2Q9Y2T1 843 aa21.19■□□□□ 0.98
COX4I1-215ENST00000568339 ZBTB7CA1YPR0 619 aa21.18■□□□□ 0.98
COX4I1-215ENST00000568339 NFKBIBQ15653 356 aa21.18■□□□□ 0.98
COX4I1-215ENST00000568339 KRT24Q2M2I5 525 aa21.18■□□□□ 0.98
COX4I1-215ENST00000568339 BRINP3Q76B58 766 aa21.18■□□□□ 0.98
COX4I1-215ENST00000568339 LRRC59Q96AG4 307 aaKnown RBP21.18■□□□□ 0.98
COX4I1-215ENST00000568339 ZNF335Q9H4Z2 1342 aaPredicted RBP21.18■□□□□ 0.98
COX4I1-215ENST00000568339 PLEKHG2Q9H7P9 1386 aa21.18■□□□□ 0.98
COX4I1-215ENST00000568339 OVOS2A0A0G2JMS6 1433 aa21.18■□□□□ 0.98
COX4I1-215ENST00000568339 DDX17Q92841 729 aaKnown RBP21.18■□□□□ 0.98
COX4I1-215ENST00000568339 ERBB3P21860 1342 aa21.18■□□□□ 0.98
COX4I1-215ENST00000568339 CACNA1FO60840 1977 aa21.18■□□□□ 0.98
COX4I1-215ENST00000568339 TAF7Q15545 349 aaPredicted RBP21.17■□□□□ 0.98
COX4I1-215ENST00000568339 PLEKHO1Q53GL0 409 aaPredicted RBP21.17■□□□□ 0.98
COX4I1-215ENST00000568339 PTPRCP08575 1304 aa21.17■□□□□ 0.98
COX4I1-215ENST00000568339 KDM3BQ7LBC6 1761 aa21.17■□□□□ 0.98
COX4I1-215ENST00000568339 RGS12O14924 1447 aa21.17■□□□□ 0.98
COX4I1-215ENST00000568339 VIRMAQ69YN4 1812 aaKnown RBP21.17■□□□□ 0.98
COX4I1-215ENST00000568339 ZBTB7BO15156 539 aaPredicted RBP21.17■□□□□ 0.98
COX4I1-215ENST00000568339 CPDO75976 1380 aa21.17■□□□□ 0.98
COX4I1-215ENST00000568339 ADAMTS7Q9UKP4 1686 aa21.16■□□□□ 0.98
COX4I1-215ENST00000568339 AKAP4Q5JQC9 854 aa21.16■□□□□ 0.98
COX4I1-215ENST00000568339 MIS18AQ9NYP9 233 aa21.16■□□□□ 0.98
COX4I1-215ENST00000568339 SOS2Q07890 1332 aaPredicted RBP21.14■□□□□ 0.97
COX4I1-215ENST00000568339 ZC3H6P61129 1189 aaKnown RBP21.13■□□□□ 0.97
COX4I1-215ENST00000568339 INTS3Q68E01 1043 aaKnown RBP21.13■□□□□ 0.97
COX4I1-215ENST00000568339 SLAIN2Q9P270 581 aa21.13■□□□□ 0.97
COX4I1-215ENST00000568339 FAM161AQ3B820 660 aa21.12■□□□□ 0.97
COX4I1-215ENST00000568339 SMC5Q8IY18 1101 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms