RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 NGDNQ8NEJ9 315 aaKnown RBP11□□□□□ -0.65
HDGFL3-206ENST00000568294 ABCC4O15439 1325 aa11□□□□□ -0.65
HDGFL3-206ENST00000568294 RABEP1Q15276 862 aa10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 PODXL2Q9NZ53 605 aa10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 NSFL1CQ9UNZ2 370 aaKnown RBP10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 KIAA1210Q9ULL0 1709 aa10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 CLCN1P35523 988 aa10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 CEBPAP49715 358 aaPredicted RBP10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 XPCQ01831 940 aaPredicted RBP10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 RIMS2Q9UQ26 1411 aa10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 CD163L1Q9NR16 1453 aa10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 PRIM1P49642 420 aaKnown RBP10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 STK31Q9BXU1 1019 aa10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 USP26Q9BXU7 913 aa10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 DCTPP1Q9H773 170 aa10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 R3HCC1Q9Y3T6 440 aaKnown RBP10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 FAM135BQ49AJ0 1406 aa10.99□□□□□ -0.65
HDGFL3-206ENST00000568294 COL3A1P02461 1466 aaPredicted RBP10.98□□□□□ -0.65
HDGFL3-206ENST00000568294 CHMP3Q9Y3E7 222 aa10.98□□□□□ -0.65
HDGFL3-206ENST00000568294 SETBP1Q9Y6X0 1596 aa10.98□□□□□ -0.65
HDGFL3-206ENST00000568294 NEXMIFQ5QGS0 1516 aa10.98□□□□□ -0.65
HDGFL3-206ENST00000568294 METP08581 1390 aa10.98□□□□□ -0.65
HDGFL3-206ENST00000568294 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.98□□□□□ -0.65
HDGFL3-206ENST00000568294 SKOR2Q2VWA4 1001 aaPredicted RBP10.98□□□□□ -0.65
HDGFL3-206ENST00000568294 LMOD2Q6P5Q4 547 aa10.98□□□□□ -0.65
HDGFL3-206ENST00000568294 DNAJC5Q9H3Z4 198 aa10.98□□□□□ -0.65
HDGFL3-206ENST00000568294 ZSCAN23Q3MJ62 389 aa10.97□□□□□ -0.65
HDGFL3-206ENST00000568294 KIAA1211Q6ZU35 1233 aa10.97□□□□□ -0.65
HDGFL3-206ENST00000568294 ANKRD44Q8N8A2 993 aa10.97□□□□□ -0.65
HDGFL3-206ENST00000568294 RBSNQ9H1K0 784 aa10.97□□□□□ -0.65
HDGFL3-206ENST00000568294 PALD1Q9ULE6 856 aa10.97□□□□□ -0.65
HDGFL3-206ENST00000568294 CIZ1Q9ULV3 898 aaPredicted RBP10.97□□□□□ -0.65
HDGFL3-206ENST00000568294 PTPRMP28827 1452 aa10.97□□□□□ -0.65
HDGFL3-206ENST00000568294 AK9Q5TCS8 1911 aa10.97□□□□□ -0.65
HDGFL3-206ENST00000568294 MTHFSDQ2M296 383 aaKnown RBP10.97□□□□□ -0.65
HDGFL3-206ENST00000568294 ZC3H13Q5T200 1668 aaKnown RBP10.97□□□□□ -0.65
HDGFL3-206ENST00000568294 ACEP12821 1306 aa10.97□□□□□ -0.65
HDGFL3-206ENST00000568294 OS9Q13438 667 aaPredicted RBP10.97□□□□□ -0.65
HDGFL3-206ENST00000568294 PNMA6EA0A0J9YXQ4 647 aa10.96□□□□□ -0.65
HDGFL3-206ENST00000568294 BCL11BQ9C0K0 894 aaPredicted RBP10.96□□□□□ -0.65
HDGFL3-206ENST00000568294 FAM13BQ9NYF5 915 aa10.96□□□□□ -0.65
HDGFL3-206ENST00000568294 PPLO60437 1756 aa10.96□□□□□ -0.65
HDGFL3-206ENST00000568294 PRR36Q9H6K5 1346 aa10.96□□□□□ -0.65
HDGFL3-206ENST00000568294 ERC2O15083 957 aa10.96□□□□□ -0.66
HDGFL3-206ENST00000568294 HMMRO75330 724 aa10.96□□□□□ -0.66
HDGFL3-206ENST00000568294 REC8O95072 547 aa10.96□□□□□ -0.66
HDGFL3-206ENST00000568294 DDIT3P35638 169 aa10.96□□□□□ -0.66
HDGFL3-206ENST00000568294 ARHGAP45Q92619 1136 aa10.96□□□□□ -0.66
HDGFL3-206ENST00000568294 LRRFIP2Q9Y608 721 aaKnown RBP10.96□□□□□ -0.66
HDGFL3-206ENST00000568294 ZNF853P0CG23 659 aa10.96□□□□□ -0.66
HDGFL3-206ENST00000568294 CPA1P15085 419 aa10.96□□□□□ -0.66
HDGFL3-206ENST00000568294 DNTTIP2Q5QJE6 756 aaKnown RBP10.96□□□□□ -0.66
HDGFL3-206ENST00000568294 PUS7Q96PZ0 661 aaKnown RBP10.96□□□□□ -0.66
HDGFL3-206ENST00000568294 CCDC9Q9Y3X0 531 aaKnown RBP10.96□□□□□ -0.66
HDGFL3-206ENST00000568294 ARAP3Q8WWN8 1544 aa10.95□□□□□ -0.66
HDGFL3-206ENST00000568294 UNC5CLQ8IV45 518 aa10.95□□□□□ -0.66
HDGFL3-206ENST00000568294 ARHGEF28Q8N1W1 1705 aaKnown RBP10.95□□□□□ -0.66
HDGFL3-206ENST00000568294 HECW2Q9P2P5 1572 aa10.95□□□□□ -0.66
HDGFL3-206ENST00000568294 PDE1AP54750 535 aa10.95□□□□□ -0.66
HDGFL3-206ENST00000568294 NUCB2P80303 420 aa10.95□□□□□ -0.66
HDGFL3-206ENST00000568294 SIGLEC1Q9BZZ2 1709 aa10.95□□□□□ -0.66
HDGFL3-206ENST00000568294 ADGRB2O60241 1585 aa10.95□□□□□ -0.66
HDGFL3-206ENST00000568294 VIRMAQ69YN4 1812 aaKnown RBP10.95□□□□□ -0.66
HDGFL3-206ENST00000568294 GPT2Q8TD30 523 aa10.94□□□□□ -0.66
HDGFL3-206ENST00000568294 PNPLA6Q8IY17 1366 aa10.94□□□□□ -0.66
HDGFL3-206ENST00000568294 MYO3AQ8NEV4 1616 aa10.94□□□□□ -0.66
HDGFL3-206ENST00000568294 NLRP6P59044 892 aa10.94□□□□□ -0.66
HDGFL3-206ENST00000568294 KLHL40Q2TBA0 621 aa10.94□□□□□ -0.66
HDGFL3-206ENST00000568294 TMX3Q96JJ7 454 aa10.94□□□□□ -0.66
HDGFL3-206ENST00000568294 MLH3Q9UHC1 1453 aa10.94□□□□□ -0.66
HDGFL3-206ENST00000568294 MAP3K19Q56UN5 1328 aa10.94□□□□□ -0.66
HDGFL3-206ENST00000568294 SURF6O75683 361 aaKnown RBP10.94□□□□□ -0.66
HDGFL3-206ENST00000568294 ZNF830Q96NB3 372 aaPredicted RBP10.94□□□□□ -0.66
HDGFL3-206ENST00000568294 LMBRD1Q9NUN5 540 aa10.94□□□□□ -0.66
HDGFL3-206ENST00000568294 IFT172Q9UG01 1749 aa10.93□□□□□ -0.66
HDGFL3-206ENST00000568294 RTL1A6NKG5 1358 aa10.93□□□□□ -0.66
HDGFL3-206ENST00000568294 GNAI2P04899 355 aa10.93□□□□□ -0.66
HDGFL3-206ENST00000568294 RPAP2Q8IXW5 612 aaPredicted RBP10.93□□□□□ -0.66
HDGFL3-206ENST00000568294 TMEM63CQ9P1W3 806 aa10.93□□□□□ -0.66
HDGFL3-206ENST00000568294 PIK3C2BO00750 1634 aa10.93□□□□□ -0.66
HDGFL3-206ENST00000568294 ZFYVE9O95405 1425 aa10.93□□□□□ -0.66
HDGFL3-206ENST00000568294 TTC21BQ7Z4L5 1316 aa10.93□□□□□ -0.66
HDGFL3-206ENST00000568294 CCDC173Q0VFZ6 552 aa10.93□□□□□ -0.66
HDGFL3-206ENST00000568294 LMTK2Q8IWU2 1503 aa10.93□□□□□ -0.66
HDGFL3-206ENST00000568294 LRRCC1Q9C099 1032 aa10.93□□□□□ -0.66
HDGFL3-206ENST00000568294 PHAXQ9H814 394 aaKnown RBP10.93□□□□□ -0.66
HDGFL3-206ENST00000568294 ZMYM3Q14202 1370 aa10.92□□□□□ -0.66
HDGFL3-206ENST00000568294 MX1P20591 662 aa10.92□□□□□ -0.66
HDGFL3-206ENST00000568294 FLIIQ13045 1269 aa10.92□□□□□ -0.66
HDGFL3-206ENST00000568294 FIBPO43427 364 aa10.92□□□□□ -0.66
HDGFL3-206ENST00000568294 MCCP23508 829 aa10.92□□□□□ -0.66
HDGFL3-206ENST00000568294 PTCH1Q13635 1447 aa10.92□□□□□ -0.66
HDGFL3-206ENST00000568294 UBE2Q2Q8WVN8 375 aa10.92□□□□□ -0.66
HDGFL3-206ENST00000568294 SPG7Q9UQ90 795 aa10.92□□□□□ -0.66
HDGFL3-206ENST00000568294 ZDHHC9Q9Y397 364 aa10.92□□□□□ -0.66
HDGFL3-206ENST00000568294 CHL1O00533 1208 aa10.91□□□□□ -0.66
HDGFL3-206ENST00000568294 IL25Q9H293 177 aa10.91□□□□□ -0.66
HDGFL3-206ENST00000568294 GADD45BO75293 160 aaPredicted RBP10.91□□□□□ -0.66
HDGFL3-206ENST00000568294 CWC27Q6UX04 472 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-206ENST00000568294 CPS1P31327 1500 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms