RNA–Protein interactions for RNA: ENST00000568292.1

CDH3-207, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-207ENST00000568292 EIF4A2Q14240 407 aaKnown RBP14.01□□□□□ -0.17
CDH3-207ENST00000568292 TXNRD1Q16881 649 aa14.01□□□□□ -0.17
CDH3-207ENST00000568292 AMER1Q5JTC6 1135 aaPredicted RBP14.01□□□□□ -0.17
CDH3-207ENST00000568292 SPG7Q9UQ90 795 aa14□□□□□ -0.17
CDH3-207ENST00000568292 SYTL4Q96C24 671 aaPredicted RBP13.99□□□□□ -0.17
CDH3-207ENST00000568292 MEGF6O75095 1541 aa13.99□□□□□ -0.17
CDH3-207ENST00000568292 MAP2P11137 1827 aaKnown RBP13.99□□□□□ -0.17
CDH3-207ENST00000568292 SBF2Q86WG5 1849 aa13.99□□□□□ -0.17
CDH3-207ENST00000568292 PCDH11XQ9BZA7 1347 aa13.98□□□□□ -0.17
CDH3-207ENST00000568292 PCDH11YQ9BZA8 1340 aa13.98□□□□□ -0.17
CDH3-207ENST00000568292 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.98□□□□□ -0.17
CDH3-207ENST00000568292 RGPD2P0DJD1 1756 aa13.97□□□□□ -0.17
CDH3-207ENST00000568292 CC2D1BQ5T0F9 858 aaKnown RBP13.97□□□□□ -0.17
CDH3-207ENST00000568292 MTHFSP49914 203 aa13.96□□□□□ -0.17
CDH3-207ENST00000568292 STK32BQ9NY57 414 aa13.96□□□□□ -0.17
CDH3-207ENST00000568292 ANKRD26Q9UPS8 1709 aa13.95□□□□□ -0.18
CDH3-207ENST00000568292 CYP27B1O15528 508 aa13.95□□□□□ -0.18
CDH3-207ENST00000568292 SLC27A3Q5K4L6 730 aa13.95□□□□□ -0.18
CDH3-207ENST00000568292 EP400Q96L91 3159 aa13.95□□□□□ -0.18
CDH3-207ENST00000568292 NCAPD2Q15021 1401 aa13.94□□□□□ -0.18
CDH3-207ENST00000568292 NKX1-1Q15270 411 aaPredicted RBP13.94□□□□□ -0.18
CDH3-207ENST00000568292 SLC15A2Q16348 729 aa13.94□□□□□ -0.18
CDH3-207ENST00000568292 PLEKHO1Q53GL0 409 aaPredicted RBP13.94□□□□□ -0.18
CDH3-207ENST00000568292 IFNL2Q8IZJ0 200 aa13.94□□□□□ -0.18
CDH3-207ENST00000568292 RREB1Q92766 1687 aa13.94□□□□□ -0.18
CDH3-207ENST00000568292 NPC1L1Q9UHC9 1359 aa13.94□□□□□ -0.18
CDH3-207ENST00000568292 IGSF1Q8N6C5 1336 aa13.93□□□□□ -0.18
CDH3-207ENST00000568292 HMGB2P26583 209 aaKnown RBP13.93□□□□□ -0.18
CDH3-207ENST00000568292 IL13P35225 146 aa13.93□□□□□ -0.18
CDH3-207ENST00000568292 CNGB1Q14028 1251 aaPredicted RBP13.93□□□□□ -0.18
CDH3-207ENST00000568292 ANO8Q9HCE9 1232 aaPredicted RBP13.93□□□□□ -0.18
CDH3-207ENST00000568292 NHSQ6T4R5 1651 aa13.93□□□□□ -0.18
CDH3-207ENST00000568292 RGPD3A6NKT7 1758 aaPredicted RBP13.92□□□□□ -0.18
CDH3-207ENST00000568292 RGPD4Q7Z3J3 1758 aa13.92□□□□□ -0.18
CDH3-207ENST00000568292 AMOTQ4VCS5 1084 aa13.92□□□□□ -0.18
CDH3-207ENST00000568292 MPRIPQ6WCQ1 1025 aa13.92□□□□□ -0.18
CDH3-207ENST00000568292 SPON1Q9HCB6 807 aa13.92□□□□□ -0.18
CDH3-207ENST00000568292 LRRC4BQ9NT99 713 aa13.92□□□□□ -0.18
CDH3-207ENST00000568292 NUP188Q5SRE5 1749 aa13.91□□□□□ -0.18
CDH3-207ENST00000568292 PHKG2P15735 406 aa13.91□□□□□ -0.18
CDH3-207ENST00000568292 SULT6B1Q6IMI4 303 aa13.91□□□□□ -0.18
CDH3-207ENST00000568292 DIAPH1O60610 1272 aaKnown RBP13.9□□□□□ -0.18
CDH3-207ENST00000568292 HSP90AB1P08238 724 aaKnown RBP13.9□□□□□ -0.18
CDH3-207ENST00000568292 SMARCC1Q92922 1105 aaPredicted RBP13.9□□□□□ -0.18
CDH3-207ENST00000568292 PLEKHG2Q9H7P9 1386 aa13.9□□□□□ -0.18
CDH3-207ENST00000568292 CCNL1Q9UK58 526 aaPredicted RBP13.89□□□□□ -0.19
CDH3-207ENST00000568292 KAT6BQ8WYB5 2073 aa13.88□□□□□ -0.19
CDH3-207ENST00000568292 PIGBQ92521 554 aa13.88□□□□□ -0.19
CDH3-207ENST00000568292 TMOD3Q9NYL9 352 aa13.88□□□□□ -0.19
CDH3-207ENST00000568292 BTAF1O14981 1849 aa13.87□□□□□ -0.19
CDH3-207ENST00000568292 KCNQ4P56696 695 aa13.87□□□□□ -0.19
CDH3-207ENST00000568292 C1orf141Q5JVX7 400 aa13.87□□□□□ -0.19
CDH3-207ENST00000568292 ZNF530Q6P9A1 599 aaPredicted RBP13.87□□□□□ -0.19
CDH3-207ENST00000568292 AEBP1Q8IUX7 1158 aa13.87□□□□□ -0.19
CDH3-207ENST00000568292 AKT1S1Q96B36 256 aa13.87□□□□□ -0.19
CDH3-207ENST00000568292 PPP1R1BQ9UD71 204 aaPredicted RBP13.87□□□□□ -0.19
CDH3-207ENST00000568292 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
CDH3-207ENST00000568292 ERVV-2B6SEH9 535 aa13.86□□□□□ -0.19
CDH3-207ENST00000568292 DCAF5Q96JK2 942 aa13.86□□□□□ -0.19
CDH3-207ENST00000568292 PDGFDQ9GZP0 370 aaPredicted RBP13.86□□□□□ -0.19
CDH3-207ENST00000568292 TFCP2L1Q9NZI6 479 aa13.86□□□□□ -0.19
CDH3-207ENST00000568292 ZBTB7AO95365 584 aa13.85□□□□□ -0.19
CDH3-207ENST00000568292 ZNF827Q17R98 1081 aa13.85□□□□□ -0.19
CDH3-207ENST00000568292 CFAP53Q96M91 514 aa13.85□□□□□ -0.19
CDH3-207ENST00000568292 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
CDH3-207ENST00000568292 LRP5O75197 1615 aa13.85□□□□□ -0.19
CDH3-207ENST00000568292 DOT1LQ8TEK3 1739 aa13.84□□□□□ -0.19
CDH3-207ENST00000568292 HMOX1P09601 288 aa13.84□□□□□ -0.19
CDH3-207ENST00000568292 CABP4P57796 275 aa13.84□□□□□ -0.19
CDH3-207ENST00000568292 SLC16A10Q8TF71 515 aa13.84□□□□□ -0.19
CDH3-207ENST00000568292 MTFR1LQ9H019 292 aa13.84□□□□□ -0.19
CDH3-207ENST00000568292 PKD1L3Q7Z443 1732 aa13.84□□□□□ -0.19
CDH3-207ENST00000568292 KDRP35968 1356 aa13.83□□□□□ -0.19
CDH3-207ENST00000568292 PALLDQ8WX93 1383 aa13.83□□□□□ -0.19
CDH3-207ENST00000568292 U2SURPO15042 1029 aaKnown RBP13.83□□□□□ -0.2
CDH3-207ENST00000568292 ASAP1Q9ULH1 1129 aa13.83□□□□□ -0.2
CDH3-207ENST00000568292 NUDCQ9Y266 331 aa13.83□□□□□ -0.2
CDH3-207ENST00000568292 PPP2R1AP30153 589 aa13.82□□□□□ -0.2
CDH3-207ENST00000568292 AKAP4Q5JQC9 854 aa13.82□□□□□ -0.2
CDH3-207ENST00000568292 ATG3Q9NT62 314 aa13.82□□□□□ -0.2
CDH3-207ENST00000568292 LOC102724428A0A0B4J2F2 783 aa13.81□□□□□ -0.2
CDH3-207ENST00000568292 SIK1P57059 783 aa13.81□□□□□ -0.2
CDH3-207ENST00000568292 MSH5O43196 834 aa13.8□□□□□ -0.2
CDH3-207ENST00000568292 ZEB1P37275 1124 aaPredicted RBP13.8□□□□□ -0.2
CDH3-207ENST00000568292 NFATC2IPQ8NCF5 419 aa13.8□□□□□ -0.2
CDH3-207ENST00000568292 FLAD1Q8NFF5 587 aa13.8□□□□□ -0.2
CDH3-207ENST00000568292 PNPLA7Q6ZV29 1317 aa13.8□□□□□ -0.2
CDH3-207ENST00000568292 ATP6V1AP38606 617 aa13.79□□□□□ -0.2
CDH3-207ENST00000568292 PTGER2P43116 358 aa13.79□□□□□ -0.2
CDH3-207ENST00000568292 MTHFSDQ2M296 383 aaKnown RBP13.79□□□□□ -0.2
CDH3-207ENST00000568292 RBM42Q9BTD8 480 aaKnown RBP13.79□□□□□ -0.2
CDH3-207ENST00000568292 RNMTO43148 476 aaKnown RBP13.78□□□□□ -0.2
CDH3-207ENST00000568292 COL23A1Q86Y22 540 aaPredicted RBP13.78□□□□□ -0.2
CDH3-207ENST00000568292 AK7Q96M32 723 aa13.78□□□□□ -0.2
CDH3-207ENST00000568292 PAPPAQ13219 1627 aa13.78□□□□□ -0.2
CDH3-207ENST00000568292 LY75O60449 1722 aa13.78□□□□□ -0.2
CDH3-207ENST00000568292 DCAF8L1A6NGE4 600 aa13.77□□□□□ -0.21
CDH3-207ENST00000568292 DDX10Q13206 875 aaKnown RBP13.77□□□□□ -0.21
CDH3-207ENST00000568292 ARXQ96QS3 562 aa13.77□□□□□ -0.21
CDH3-207ENST00000568292 SGIP1Q9BQI5 828 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms