RNA–Protein interactions for RNA: ENST00000568023.1

CDH5-206, Transcript of cadherin 5, humanhuman

TSL 4

Gene CDH5, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-206ENST00000568023 DUSP27Q5VZP5 1158 aa14.71□□□□□ -0.05
CDH5-206ENST00000568023 RCAN3Q9UKA8 241 aa14.71□□□□□ -0.05
CDH5-206ENST00000568023 AEBP1Q8IUX7 1158 aa14.7□□□□□ -0.06
CDH5-206ENST00000568023 TRMT2AQ8IZ69 625 aaKnown RBP14.7□□□□□ -0.06
CDH5-206ENST00000568023 PHACTR3Q96KR7 559 aa14.69□□□□□ -0.06
CDH5-206ENST00000568023 C8orf37Q96NL8 207 aa14.69□□□□□ -0.06
CDH5-206ENST00000568023 TRIM35Q9UPQ4 493 aa14.69□□□□□ -0.06
CDH5-206ENST00000568023 DISP2A7MBM2 1401 aa14.68□□□□□ -0.06
CDH5-206ENST00000568023 MEGF6O75095 1541 aa14.68□□□□□ -0.06
CDH5-206ENST00000568023 FKBP8Q14318 412 aa14.68□□□□□ -0.06
CDH5-206ENST00000568023 LARP1Q6PKG0 1096 aaKnown RBP14.68□□□□□ -0.06
CDH5-206ENST00000568023 GAS2L2Q8NHY3 880 aa14.68□□□□□ -0.06
CDH5-206ENST00000568023 CARD10Q9BWT7 1032 aa14.68□□□□□ -0.06
CDH5-206ENST00000568023 GLI3P10071 1580 aa14.68□□□□□ -0.06
CDH5-206ENST00000568023 THSD7AQ9UPZ6 1657 aa14.68□□□□□ -0.06
CDH5-206ENST00000568023 ATRNO75882 1429 aa14.67□□□□□ -0.06
CDH5-206ENST00000568023 UNC5CLQ8IV45 518 aa14.67□□□□□ -0.06
CDH5-206ENST00000568023 NGLY1Q96IV0 654 aa14.67□□□□□ -0.06
CDH5-206ENST00000568023 LRRC37A3O60309 1634 aa14.66□□□□□ -0.06
CDH5-206ENST00000568023 ADAMTS7Q9UKP4 1686 aa14.66□□□□□ -0.06
CDH5-206ENST00000568023 CSB-PGBD3P0DP91 1061 aa14.66□□□□□ -0.06
CDH5-206ENST00000568023 ERICH6BQ5W0A0 696 aa14.66□□□□□ -0.06
CDH5-206ENST00000568023 USHBP1Q8N6Y0 703 aa14.66□□□□□ -0.06
CDH5-206ENST00000568023 STRN4Q9NRL3 753 aa14.66□□□□□ -0.06
CDH5-206ENST00000568023 NLRP2Q9NX02 1062 aa14.66□□□□□ -0.06
CDH5-206ENST00000568023 OVOS2A0A0G2JMS6 1433 aa14.66□□□□□ -0.06
CDH5-206ENST00000568023 AFF2P51816 1311 aa14.66□□□□□ -0.06
CDH5-206ENST00000568023 SPATA31A5Q5VU36 1347 aa14.66□□□□□ -0.06
CDH5-206ENST00000568023 RNF123Q5XPI4 1314 aa14.66□□□□□ -0.06
CDH5-206ENST00000568023 SPATA31A7Q8IWB4 1347 aa14.66□□□□□ -0.06
CDH5-206ENST00000568023 EVA1CP58658 441 aa14.65□□□□□ -0.06
CDH5-206ENST00000568023 VPS72Q15906 364 aa14.65□□□□□ -0.06
CDH5-206ENST00000568023 MEX3CQ5U5Q3 659 aaKnown RBP14.65□□□□□ -0.06
CDH5-206ENST00000568023 TOM1L2Q6ZVM7 507 aa14.65□□□□□ -0.06
CDH5-206ENST00000568023 SPATA31A1Q5TZJ5 1347 aa14.65□□□□□ -0.06
CDH5-206ENST00000568023 CT47B1P0C2W7 299 aaPredicted RBP14.64□□□□□ -0.07
CDH5-206ENST00000568023 GNAI1P63096 354 aa14.64□□□□□ -0.07
CDH5-206ENST00000568023 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.64□□□□□ -0.07
CDH5-206ENST00000568023 RTF1Q92541 710 aaKnown RBP14.64□□□□□ -0.07
CDH5-206ENST00000568023 SPINK5Q9NQ38 1064 aaPredicted RBP14.64□□□□□ -0.07
CDH5-206ENST00000568023 SCN11AQ9UI33 1791 aa14.64□□□□□ -0.07
CDH5-206ENST00000568023 HTATSF1O43719 755 aaKnown RBP14.63□□□□□ -0.07
CDH5-206ENST00000568023 RRP1P56182 461 aaKnown RBP14.63□□□□□ -0.07
CDH5-206ENST00000568023 USP21Q9UK80 565 aa14.63□□□□□ -0.07
CDH5-206ENST00000568023 FANCIQ9NVI1 1328 aa14.63□□□□□ -0.07
CDH5-206ENST00000568023 ILDR1Q86SU0 546 aaPredicted RBP14.62□□□□□ -0.07
CDH5-206ENST00000568023 IFT57Q9NWB7 429 aa14.62□□□□□ -0.07
CDH5-206ENST00000568023 THRAP3Q9Y2W1 955 aaKnown RBP14.62□□□□□ -0.07
CDH5-206ENST00000568023 MAP3K5Q99683 1374 aa14.61□□□□□ -0.07
CDH5-206ENST00000568023 SIPA1L3O60292 1781 aaPredicted RBP14.61□□□□□ -0.07
CDH5-206ENST00000568023 MTHFSDQ2M296 383 aaKnown RBP14.61□□□□□ -0.07
CDH5-206ENST00000568023 AMOTQ4VCS5 1084 aa14.61□□□□□ -0.07
CDH5-206ENST00000568023 BARGINQ6ZT62 677 aa14.61□□□□□ -0.07
CDH5-206ENST00000568023 PLEKHO1Q53GL0 409 aaPredicted RBP14.6□□□□□ -0.07
CDH5-206ENST00000568023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.6□□□□□ -0.07
CDH5-206ENST00000568023 BRWD3Q6RI45 1802 aa14.59□□□□□ -0.07
CDH5-206ENST00000568023 TNS2Q63HR2 1409 aa14.59□□□□□ -0.07
CDH5-206ENST00000568023 GNAT3A8MTJ3 354 aa14.59□□□□□ -0.07
CDH5-206ENST00000568023 IL2RBP14784 551 aa14.59□□□□□ -0.07
CDH5-206ENST00000568023 RAPGEF4Q8WZA2 1011 aa14.59□□□□□ -0.07
CDH5-206ENST00000568023 CFAP44Q96MT7 982 aa14.59□□□□□ -0.07
CDH5-206ENST00000568023 LAS1LQ9Y4W2 734 aaKnown RBP14.59□□□□□ -0.07
CDH5-206ENST00000568023 TOGARAM1Q9Y4F4 1720 aa14.58□□□□□ -0.07
CDH5-206ENST00000568023 TATP17735 454 aaPredicted RBP14.58□□□□□ -0.08
CDH5-206ENST00000568023 IRX6P78412 446 aaPredicted RBP14.58□□□□□ -0.08
CDH5-206ENST00000568023 TSR2Q969E8 191 aaKnown RBP14.58□□□□□ -0.08
CDH5-206ENST00000568023 TRPC5Q9UL62 973 aaPredicted RBP14.58□□□□□ -0.08
CDH5-206ENST00000568023 C1orf141Q5JVX7 400 aa14.57□□□□□ -0.08
CDH5-206ENST00000568023 CDCA7Q9BWT1 371 aaPredicted RBP14.57□□□□□ -0.08
CDH5-206ENST00000568023 CANXP27824 592 aaKnown RBP14.56□□□□□ -0.08
CDH5-206ENST00000568023 EXOSC9Q06265 439 aaKnown RBP14.56□□□□□ -0.08
CDH5-206ENST00000568023 ZNF772Q68DY9 489 aaPredicted RBP14.56□□□□□ -0.08
CDH5-206ENST00000568023 MCM10Q7L590 875 aa14.56□□□□□ -0.08
CDH5-206ENST00000568023 ZNF428Q96B54 188 aa14.56□□□□□ -0.08
CDH5-206ENST00000568023 GJD4Q96KN9 370 aaPredicted RBP14.56□□□□□ -0.08
CDH5-206ENST00000568023 THUMPD2Q9BTF0 503 aaKnown RBP14.56□□□□□ -0.08
CDH5-206ENST00000568023 USP35Q9P2H5 1018 aa14.56□□□□□ -0.08
CDH5-206ENST00000568023 ITGB4P16144 1822 aa14.56□□□□□ -0.08
CDH5-206ENST00000568023 ONECUT3O60422 494 aaPredicted RBP14.55□□□□□ -0.08
CDH5-206ENST00000568023 ZNF853P0CG23 659 aa14.55□□□□□ -0.08
CDH5-206ENST00000568023 AKAP4Q5JQC9 854 aa14.55□□□□□ -0.08
CDH5-206ENST00000568023 ZNF530Q6P9A1 599 aaPredicted RBP14.55□□□□□ -0.08
CDH5-206ENST00000568023 RGS17Q9UGC6 210 aaPredicted RBP14.55□□□□□ -0.08
CDH5-206ENST00000568023 SPG7Q9UQ90 795 aa14.55□□□□□ -0.08
CDH5-206ENST00000568023 MRC1P22897 1456 aa14.55□□□□□ -0.08
CDH5-206ENST00000568023 DCTN1Q14203 1278 aa14.54□□□□□ -0.08
CDH5-206ENST00000568023 QTRT2Q9H974 415 aaKnown RBP14.54□□□□□ -0.08
CDH5-206ENST00000568023 MBIPQ9NS73 344 aa14.54□□□□□ -0.08
CDH5-206ENST00000568023 DOT1LQ8TEK3 1739 aa14.54□□□□□ -0.08
CDH5-206ENST00000568023 SBF2Q86WG5 1849 aa14.54□□□□□ -0.08
CDH5-206ENST00000568023 KDM3BQ7LBC6 1761 aa14.53□□□□□ -0.08
CDH5-206ENST00000568023 KDM6AO15550 1401 aaPredicted RBP14.53□□□□□ -0.08
CDH5-206ENST00000568023 CEMIPQ8WUJ3 1361 aa14.53□□□□□ -0.08
CDH5-206ENST00000568023 PCDH11XQ9BZA7 1347 aa14.53□□□□□ -0.08
CDH5-206ENST00000568023 PCDH11YQ9BZA8 1340 aa14.53□□□□□ -0.08
CDH5-206ENST00000568023 CYP27B1O15528 508 aa14.53□□□□□ -0.08
CDH5-206ENST00000568023 RARSP54136 660 aaKnown RBP14.53□□□□□ -0.08
CDH5-206ENST00000568023 ZCRB1Q8TBF4 217 aaKnown RBP14.53□□□□□ -0.08
CDH5-206ENST00000568023 BABAM1Q9NWV8 329 aa14.53□□□□□ -0.08
CDH5-206ENST00000568023 CCDC9Q9Y3X0 531 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms