RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 ATF5Q9Y2D1 282 aaPredicted RBP16.9■□□□□ 0.3
GTF3C1-208ENST00000567843 FLT4P35916 1363 aa16.89■□□□□ 0.3
GTF3C1-208ENST00000567843 SMG6Q86US8 1419 aaKnown RBP16.89■□□□□ 0.29
GTF3C1-208ENST00000567843 KCNQ4P56696 695 aa16.89■□□□□ 0.29
GTF3C1-208ENST00000567843 KIF20BQ96Q89 1820 aa16.89■□□□□ 0.29
GTF3C1-208ENST00000567843 INSRP06213 1382 aa16.89■□□□□ 0.29
GTF3C1-208ENST00000567843 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
GTF3C1-208ENST00000567843 TATP17735 454 aaPredicted RBP16.88■□□□□ 0.29
GTF3C1-208ENST00000567843 PANK3Q9H999 370 aa16.88■□□□□ 0.29
GTF3C1-208ENST00000567843 LRRC4BQ9NT99 713 aa16.88■□□□□ 0.29
GTF3C1-208ENST00000567843 CGNL1Q0VF96 1302 aa16.88■□□□□ 0.29
GTF3C1-208ENST00000567843 FAM208AQ9UK61 1670 aaKnown RBP16.88■□□□□ 0.29
GTF3C1-208ENST00000567843 RGPD3A6NKT7 1758 aaPredicted RBP16.87■□□□□ 0.29
GTF3C1-208ENST00000567843 RGPD4Q7Z3J3 1758 aa16.87■□□□□ 0.29
GTF3C1-208ENST00000567843 BTAF1O14981 1849 aa16.85■□□□□ 0.29
GTF3C1-208ENST00000567843 ZNF827Q17R98 1081 aa16.85■□□□□ 0.29
GTF3C1-208ENST00000567843 POLKQ9UBT6 870 aa16.84■□□□□ 0.29
GTF3C1-208ENST00000567843 KIF24Q5T7B8 1368 aa16.82■□□□□ 0.28
GTF3C1-208ENST00000567843 WASHC2AQ641Q2 1341 aa16.82■□□□□ 0.28
GTF3C1-208ENST00000567843 NSD2O96028 1365 aa16.81■□□□□ 0.28
GTF3C1-208ENST00000567843 CYP27B1O15528 508 aa16.81■□□□□ 0.28
GTF3C1-208ENST00000567843 PTGER2P43116 358 aa16.81■□□□□ 0.28
GTF3C1-208ENST00000567843 EYA1Q99502 592 aa16.81■□□□□ 0.28
GTF3C1-208ENST00000567843 SHANK3Q9BYB0 1731 aa16.8■□□□□ 0.28
GTF3C1-208ENST00000567843 MPRIPQ6WCQ1 1025 aa16.8■□□□□ 0.28
GTF3C1-208ENST00000567843 CASZ1Q86V15 1759 aa16.79■□□□□ 0.28
GTF3C1-208ENST00000567843 DOT1LQ8TEK3 1739 aa16.79■□□□□ 0.28
GTF3C1-208ENST00000567843 PCDH11XQ9BZA7 1347 aa16.79■□□□□ 0.28
GTF3C1-208ENST00000567843 PCDH11YQ9BZA8 1340 aa16.79■□□□□ 0.28
GTF3C1-208ENST00000567843 EIF4A2Q14240 407 aaKnown RBP16.79■□□□□ 0.28
GTF3C1-208ENST00000567843 AKT1S1Q96B36 256 aa16.79■□□□□ 0.28
GTF3C1-208ENST00000567843 CCNL1Q9UK58 526 aaPredicted RBP16.79■□□□□ 0.28
GTF3C1-208ENST00000567843 SLC27A3Q5K4L6 730 aa16.78■□□□□ 0.28
GTF3C1-208ENST00000567843 MORC1Q86VD1 984 aa16.78■□□□□ 0.28
GTF3C1-208ENST00000567843 MTFR1LQ9H019 292 aa16.78■□□□□ 0.28
GTF3C1-208ENST00000567843 TFCP2L1Q9NZI6 479 aa16.77■□□□□ 0.28
GTF3C1-208ENST00000567843 MAP2P11137 1827 aaKnown RBP16.76■□□□□ 0.27
GTF3C1-208ENST00000567843 PAPPAQ13219 1627 aa16.76■□□□□ 0.27
GTF3C1-208ENST00000567843 PNPLA7Q6ZV29 1317 aa16.75■□□□□ 0.27
GTF3C1-208ENST00000567843 CNGB1Q14028 1251 aaPredicted RBP16.75■□□□□ 0.27
GTF3C1-208ENST00000567843 SPG7Q9UQ90 795 aa16.75■□□□□ 0.27
GTF3C1-208ENST00000567843 KNSTRNQ9Y448 316 aa16.75■□□□□ 0.27
GTF3C1-208ENST00000567843 KIF7Q2M1P5 1343 aa16.74■□□□□ 0.27
GTF3C1-208ENST00000567843 MSH5O43196 834 aa16.74■□□□□ 0.27
GTF3C1-208ENST00000567843 SGIP1Q9BQI5 828 aa16.74■□□□□ 0.27
GTF3C1-208ENST00000567843 FHDC1Q9C0D6 1143 aaPredicted RBP16.74■□□□□ 0.27
GTF3C1-208ENST00000567843 KLHL34Q8N239 644 aa16.73■□□□□ 0.27
GTF3C1-208ENST00000567843 PIGBQ92521 554 aa16.72■□□□□ 0.27
GTF3C1-208ENST00000567843 ARXQ96QS3 562 aa16.72■□□□□ 0.27
GTF3C1-208ENST00000567843 SYT17Q9BSW7 474 aa16.72■□□□□ 0.27
GTF3C1-208ENST00000567843 PALLDQ8WX93 1383 aa16.72■□□□□ 0.27
GTF3C1-208ENST00000567843 NCAPD2Q15021 1401 aa16.71■□□□□ 0.27
GTF3C1-208ENST00000567843 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
GTF3C1-208ENST00000567843 ANKRD26Q9UPS8 1709 aa16.7■□□□□ 0.26
GTF3C1-208ENST00000567843 PHKG2P15735 406 aa16.7■□□□□ 0.26
GTF3C1-208ENST00000567843 NKX1-1Q15270 411 aaPredicted RBP16.7■□□□□ 0.26
GTF3C1-208ENST00000567843 SMIM5Q71RC9 77 aa16.7■□□□□ 0.26
GTF3C1-208ENST00000567843 COL23A1Q86Y22 540 aaPredicted RBP16.7■□□□□ 0.26
GTF3C1-208ENST00000567843 AEBP1Q8IUX7 1158 aa16.7■□□□□ 0.26
GTF3C1-208ENST00000567843 IFNL2Q8IZJ0 200 aa16.7■□□□□ 0.26
GTF3C1-208ENST00000567843 AMER1Q5JTC6 1135 aaPredicted RBP16.69■□□□□ 0.26
GTF3C1-208ENST00000567843 IGSF1Q8N6C5 1336 aa16.69■□□□□ 0.26
GTF3C1-208ENST00000567843 CC2D1BQ5T0F9 858 aaKnown RBP16.68■□□□□ 0.26
GTF3C1-208ENST00000567843 MSL1Q68DK7 614 aa16.68■□□□□ 0.26
GTF3C1-208ENST00000567843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.68■□□□□ 0.261e-6■■□□□ 11.6
GTF3C1-208ENST00000567843 TMOD3Q9NYL9 352 aa16.68■□□□□ 0.26
GTF3C1-208ENST00000567843 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
GTF3C1-208ENST00000567843 YY1P25490 414 aa16.67■□□□□ 0.26
GTF3C1-208ENST00000567843 POLD1P28340 1107 aa16.67■□□□□ 0.26
GTF3C1-208ENST00000567843 SLC16A10Q8TF71 515 aa16.67■□□□□ 0.26
GTF3C1-208ENST00000567843 SMARCC1Q92922 1105 aaPredicted RBP16.67■□□□□ 0.26
GTF3C1-208ENST00000567843 ASAP1Q9ULH1 1129 aa16.67■□□□□ 0.26
GTF3C1-208ENST00000567843 LY75O60449 1722 aa16.67■□□□□ 0.26
GTF3C1-208ENST00000567843 PKD1L3Q7Z443 1732 aa16.67■□□□□ 0.26
GTF3C1-208ENST00000567843 SULT6B1Q6IMI4 303 aa16.66■□□□□ 0.26
GTF3C1-208ENST00000567843 PHF14O94880 888 aa16.65■□□□□ 0.26
GTF3C1-208ENST00000567843 PLEKHO1Q53GL0 409 aaPredicted RBP16.65■□□□□ 0.26
GTF3C1-208ENST00000567843 ZNF530Q6P9A1 599 aaPredicted RBP16.65■□□□□ 0.26
GTF3C1-208ENST00000567843 AMIGO3Q86WK7 504 aa16.65■□□□□ 0.26
GTF3C1-208ENST00000567843 AK7Q96M32 723 aa16.64■□□□□ 0.25
GTF3C1-208ENST00000567843 TUBGCP6Q96RT7 1819 aa16.63■□□□□ 0.25
GTF3C1-208ENST00000567843 LOC102724428A0A0B4J2F2 783 aa16.63■□□□□ 0.25
GTF3C1-208ENST00000567843 PER1O15534 1290 aaPredicted RBP16.63■□□□□ 0.25
GTF3C1-208ENST00000567843 IL13P35225 146 aa16.63■□□□□ 0.25
GTF3C1-208ENST00000567843 MTHFSP49914 203 aa16.63■□□□□ 0.25
GTF3C1-208ENST00000567843 SIK1P57059 783 aa16.63■□□□□ 0.25
GTF3C1-208ENST00000567843 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
GTF3C1-208ENST00000567843 LINC00116Q8NCU8 138 aa16.63■□□□□ 0.25
GTF3C1-208ENST00000567843 ATG3Q9NT62 314 aa16.63■□□□□ 0.25
GTF3C1-208ENST00000567843 ITGB4P16144 1822 aa16.63■□□□□ 0.25
GTF3C1-208ENST00000567843 ATP6V1AP38606 617 aa16.62■□□□□ 0.25
GTF3C1-208ENST00000567843 ITPK1Q13572 414 aa16.62■□□□□ 0.25
GTF3C1-208ENST00000567843 HMOX1P09601 288 aa16.61■□□□□ 0.25
GTF3C1-208ENST00000567843 NLGN2Q8NFZ4 835 aa16.61■□□□□ 0.25
GTF3C1-208ENST00000567843 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
GTF3C1-208ENST00000567843 CABP4P57796 275 aa16.6■□□□□ 0.25
GTF3C1-208ENST00000567843 AMOTQ4VCS5 1084 aa16.6■□□□□ 0.25
GTF3C1-208ENST00000567843 DCAF5Q96JK2 942 aa16.6■□□□□ 0.25
GTF3C1-208ENST00000567843 C5P01031 1676 aa16.59■□□□□ 0.25
GTF3C1-208ENST00000567843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms