RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 DNAJC5GQ8N7S2 189 aa20.04■□□□□ 0.8
SMG1-213ENST00000567737 KAT6BQ8WYB5 2073 aa20.04■□□□□ 0.8
SMG1-213ENST00000567737 ERBB3P21860 1342 aa20.03■□□□□ 0.8
SMG1-213ENST00000567737 MSL1Q68DK7 614 aa20.03■□□□□ 0.8
SMG1-213ENST00000567737 NFAT5O94916 1531 aa20.02■□□□□ 0.8
SMG1-213ENST00000567737 COL23A1Q86Y22 540 aaPredicted RBP20.02■□□□□ 0.8
SMG1-213ENST00000567737 SYTL4Q96C24 671 aaPredicted RBP20.02■□□□□ 0.8
SMG1-213ENST00000567737 ZNF692Q9BU19 519 aaPredicted RBP20.02■□□□□ 0.8
SMG1-213ENST00000567737 TTC21AQ8NDW8 1320 aa20.02■□□□□ 0.79
SMG1-213ENST00000567737 COL13A1Q5TAT6 717 aaPredicted RBP20.01■□□□□ 0.79
SMG1-213ENST00000567737 DDX54Q8TDD1 881 aaKnown RBP20■□□□□ 0.79
SMG1-213ENST00000567737 CCNL1Q9UK58 526 aaPredicted RBP20■□□□□ 0.79
SMG1-213ENST00000567737 KIAA1210Q9ULL0 1709 aa19.99■□□□□ 0.79
SMG1-213ENST00000567737 TOMM70O94826 608 aa19.98■□□□□ 0.79
SMG1-213ENST00000567737 NBPF1Q3BBV0 1214 aa19.98■□□□□ 0.79
SMG1-213ENST00000567737 PRIM1P49642 420 aaKnown RBP19.97■□□□□ 0.79
SMG1-213ENST00000567737 TNS4Q8IZW8 715 aa19.97■□□□□ 0.79
SMG1-213ENST00000567737 ANKRD36BQ8N2N9 1353 aa19.96■□□□□ 0.79
SMG1-213ENST00000567737 PRELPP51888 382 aa19.96■□□□□ 0.79
SMG1-213ENST00000567737 ANKRD24Q8TF21 1146 aa19.96■□□□□ 0.79
SMG1-213ENST00000567737 IGSF1Q8N6C5 1336 aa19.96■□□□□ 0.79
SMG1-213ENST00000567737 WWC3Q9ULE0 1092 aa19.95■□□□□ 0.78
SMG1-213ENST00000567737 LY75O60449 1722 aa19.95■□□□□ 0.78
SMG1-213ENST00000567737 EVC2Q86UK5 1308 aa19.95■□□□□ 0.78
SMG1-213ENST00000567737 RAB3GAP2Q9H2M9 1393 aa19.94■□□□□ 0.78
SMG1-213ENST00000567737 FLAD1Q8NFF5 587 aa19.93■□□□□ 0.78
SMG1-213ENST00000567737 KLRG1Q96E93 195 aa19.92■□□□□ 0.78
SMG1-213ENST00000567737 NSD2O96028 1365 aa19.91■□□□□ 0.78
SMG1-213ENST00000567737 KTN1Q86UP2 1357 aaKnown RBP19.91■□□□□ 0.78
SMG1-213ENST00000567737 USP47Q96K76 1375 aa19.91■□□□□ 0.78
SMG1-213ENST00000567737 HMGB2P26583 209 aaKnown RBP19.9■□□□□ 0.78
SMG1-213ENST00000567737 JMYQ8N9B5 988 aa19.9■□□□□ 0.78
SMG1-213ENST00000567737 DOT1LQ8TEK3 1739 aa19.9■□□□□ 0.78
SMG1-213ENST00000567737 WDR90Q96KV7 1748 aa19.89■□□□□ 0.77
SMG1-213ENST00000567737 USP31Q70CQ4 1352 aa19.87■□□□□ 0.77
SMG1-213ENST00000567737 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.87■□□□□ 0.77
SMG1-213ENST00000567737 LTN1O94822 1766 aa19.86■□□□□ 0.77
SMG1-213ENST00000567737 HTRA3P83110 453 aa19.85■□□□□ 0.77
SMG1-213ENST00000567737 C16orf71Q8IYS4 520 aaPredicted RBP19.85■□□□□ 0.77
SMG1-213ENST00000567737 RBM46Q8TBY0 533 aaKnown RBP19.85■□□□□ 0.77
SMG1-213ENST00000567737 CICQ96RK0 1608 aaPredicted RBP19.84■□□□□ 0.77
SMG1-213ENST00000567737 NMRK2Q9NPI5 230 aa19.84■□□□□ 0.77
SMG1-213ENST00000567737 NME9Q86XW9 330 aa19.83■□□□□ 0.77
SMG1-213ENST00000567737 ZCRB1Q8TBF4 217 aaKnown RBP19.83■□□□□ 0.77
SMG1-213ENST00000567737 LTV1Q96GA3 475 aaPredicted RBP19.83■□□□□ 0.77
SMG1-213ENST00000567737 C5P01031 1676 aa19.82■□□□□ 0.76
SMG1-213ENST00000567737 AK7Q96M32 723 aa19.81■□□□□ 0.76
SMG1-213ENST00000567737 USP54Q70EL1 1684 aa19.81■□□□□ 0.76
SMG1-213ENST00000567737 FSTL1Q12841 308 aa19.8■□□□□ 0.76
SMG1-213ENST00000567737 FAM208AQ9UK61 1670 aaKnown RBP19.8■□□□□ 0.76
SMG1-213ENST00000567737 MON2Q7Z3U7 1717 aa19.79■□□□□ 0.76
SMG1-213ENST00000567737 IP6K1Q92551 441 aa19.79■□□□□ 0.76
SMG1-213ENST00000567737 PHF14O94880 888 aa19.78■□□□□ 0.76
SMG1-213ENST00000567737 NSD3Q9BZ95 1437 aa19.77■□□□□ 0.76
SMG1-213ENST00000567737 PALLDQ8WX93 1383 aa19.77■□□□□ 0.76
SMG1-213ENST00000567737 ARHGAP27Q6ZUM4 889 aa19.76■□□□□ 0.75
SMG1-213ENST00000567737 BCS1LQ9Y276 419 aa19.76■□□□□ 0.75
SMG1-213ENST00000567737 SBNO2Q9Y2G9 1366 aa19.75■□□□□ 0.75
SMG1-213ENST00000567737 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.75■□□□□ 0.75
SMG1-213ENST00000567737 C4BP0C0L5 1744 aa19.74■□□□□ 0.75
SMG1-213ENST00000567737 SLC34A2O95436 690 aa19.74■□□□□ 0.75
SMG1-213ENST00000567737 MEGF6O75095 1541 aa19.74■□□□□ 0.75
SMG1-213ENST00000567737 AMIGO3Q86WK7 504 aa19.73■□□□□ 0.75
SMG1-213ENST00000567737 SPINK5Q9NQ38 1064 aaPredicted RBP19.73■□□□□ 0.75
SMG1-213ENST00000567737 PXDNLA1KZ92 1463 aa19.73■□□□□ 0.75
SMG1-213ENST00000567737 PLEKHG2Q9H7P9 1386 aa19.72■□□□□ 0.75
SMG1-213ENST00000567737 TAF1LQ8IZX4 1826 aa19.72■□□□□ 0.75
SMG1-213ENST00000567737 HSPA1AP0DMV8 641 aaKnown RBP19.72■□□□□ 0.75
SMG1-213ENST00000567737 HSPA1BP0DMV9 641 aaKnown RBP19.72■□□□□ 0.75
SMG1-213ENST00000567737 HDGFL2Q7Z4V5 671 aaPredicted RBP19.72■□□□□ 0.75
SMG1-213ENST00000567737 SSFA2P28290 1259 aa19.71■□□□□ 0.75
SMG1-213ENST00000567737 TGFB2P61812 414 aa19.71■□□□□ 0.75
SMG1-213ENST00000567737 KDM2BQ8NHM5 1336 aa19.71■□□□□ 0.75
SMG1-213ENST00000567737 MPRIPQ6WCQ1 1025 aa19.7■□□□□ 0.74
SMG1-213ENST00000567737 SMIM5Q71RC9 77 aa19.7■□□□□ 0.74
SMG1-213ENST00000567737 SMARCC1Q92922 1105 aaPredicted RBP19.7■□□□□ 0.74
SMG1-213ENST00000567737 TOGARAM1Q9Y4F4 1720 aa19.7■□□□□ 0.74
SMG1-213ENST00000567737 CGNL1Q0VF96 1302 aa19.7■□□□□ 0.74
SMG1-213ENST00000567737 EDC4Q6P2E9 1401 aaKnown RBP19.69■□□□□ 0.74
SMG1-213ENST00000567737 HOXC9P31274 260 aa19.69■□□□□ 0.74
SMG1-213ENST00000567737 C9orf131Q5VYM1 1079 aa19.69■□□□□ 0.74
SMG1-213ENST00000567737 TMC1Q8TDI8 760 aa19.69■□□□□ 0.74
SMG1-213ENST00000567737 CD163L1Q9NR16 1453 aa19.68■□□□□ 0.74
SMG1-213ENST00000567737 A0A0G2JLW4 131 aa19.68■□□□□ 0.74
SMG1-213ENST00000567737 MMP10P09238 476 aa19.68■□□□□ 0.74
SMG1-213ENST00000567737 AMPHP49418 695 aa19.68■□□□□ 0.74
SMG1-213ENST00000567737 RAPGEF4Q8WZA2 1011 aa19.68■□□□□ 0.74
SMG1-213ENST00000567737 UBR3Q6ZT12 1888 aa19.67■□□□□ 0.74
SMG1-213ENST00000567737 FCHSD2O94868 740 aa19.67■□□□□ 0.74
SMG1-213ENST00000567737 SMC1BQ8NDV3 1235 aa19.67■□□□□ 0.74
SMG1-213ENST00000567737 PCDH11XQ9BZA7 1347 aa19.66■□□□□ 0.74
SMG1-213ENST00000567737 PCDH11YQ9BZA8 1340 aa19.66■□□□□ 0.74
SMG1-213ENST00000567737 C10orf71Q711Q0 1435 aa19.66■□□□□ 0.74
SMG1-213ENST00000567737 KCPQ6ZWJ8 1503 aa19.66■□□□□ 0.74
SMG1-213ENST00000567737 RRAGCQ9HB90 399 aa19.65■□□□□ 0.74
SMG1-213ENST00000567737 ZNF219Q9P2Y4 722 aaPredicted RBP19.65■□□□□ 0.74
SMG1-213ENST00000567737 MAP3K19Q56UN5 1328 aa19.65■□□□□ 0.74
SMG1-213ENST00000567737 PCNTO95613 3336 aa19.64■□□□□ 0.74
SMG1-213ENST00000567737 TATP17735 454 aaPredicted RBP19.64■□□□□ 0.73
SMG1-213ENST00000567737 TERF2IPQ9NYB0 399 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms