RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 CASZ1Q86V15 1759 aa15.35■□□□□ 0.05
CDH3-206ENST00000567674 TATP17735 454 aaPredicted RBP15.35■□□□□ 0.05
CDH3-206ENST00000567674 HSP90AB2PQ58FF8 381 aa15.35■□□□□ 0.05
CDH3-206ENST00000567674 SLC27A3Q5K4L6 730 aa15.35■□□□□ 0.05
CDH3-206ENST00000567674 LTV1Q96GA3 475 aaPredicted RBP15.35■□□□□ 0.05
CDH3-206ENST00000567674 NHSQ6T4R5 1651 aa15.35■□□□□ 0.05
CDH3-206ENST00000567674 GIGYF1O75420 1035 aaPredicted RBP15.34■□□□□ 0.05
CDH3-206ENST00000567674 TXNRD1Q16881 649 aa15.34■□□□□ 0.05
CDH3-206ENST00000567674 POLKQ9UBT6 870 aa15.34■□□□□ 0.05
CDH3-206ENST00000567674 KNSTRNQ9Y448 316 aa15.34■□□□□ 0.05
CDH3-206ENST00000567674 ANKRD26Q9UPS8 1709 aa15.34■□□□□ 0.05
CDH3-206ENST00000567674 FBLN1P23142 703 aa15.33■□□□□ 0.04
CDH3-206ENST00000567674 PTGER2P43116 358 aa15.33■□□□□ 0.04
CDH3-206ENST00000567674 PROM2Q8N271 834 aa15.33■□□□□ 0.04
CDH3-206ENST00000567674 SYT17Q9BSW7 474 aa15.33■□□□□ 0.04
CDH3-206ENST00000567674 PCDH11XQ9BZA7 1347 aa15.33■□□□□ 0.04
CDH3-206ENST00000567674 PCDH11YQ9BZA8 1340 aa15.33■□□□□ 0.04
CDH3-206ENST00000567674 DDX54Q8TDD1 881 aaKnown RBP15.31■□□□□ 0.04
CDH3-206ENST00000567674 FHDC1Q9C0D6 1143 aaPredicted RBP15.31■□□□□ 0.04
CDH3-206ENST00000567674 EMILIN1Q9Y6C2 1016 aa15.31■□□□□ 0.04
CDH3-206ENST00000567674 CEP350Q5VT06 3117 aa15.3■□□□□ 0.04
CDH3-206ENST00000567674 ZBTB7AO95365 584 aa15.3■□□□□ 0.04
CDH3-206ENST00000567674 CHD4Q14839 1912 aa15.3■□□□□ 0.04
CDH3-206ENST00000567674 NKX1-1Q15270 411 aaPredicted RBP15.3■□□□□ 0.04
CDH3-206ENST00000567674 ANO8Q9HCE9 1232 aaPredicted RBP15.3■□□□□ 0.04
CDH3-206ENST00000567674 NPC1L1Q9UHC9 1359 aa15.3■□□□□ 0.04
CDH3-206ENST00000567674 SPG7Q9UQ90 795 aa15.3■□□□□ 0.04
CDH3-206ENST00000567674 MEGF6O75095 1541 aa15.29■□□□□ 0.04
CDH3-206ENST00000567674 SLC15A2Q16348 729 aa15.29■□□□□ 0.04
CDH3-206ENST00000567674 POLR3GLQ9BT43 218 aa15.29■□□□□ 0.04
CDH3-206ENST00000567674 STK32BQ9NY57 414 aa15.29■□□□□ 0.04
CDH3-206ENST00000567674 KIF7Q2M1P5 1343 aa15.28■□□□□ 0.04
CDH3-206ENST00000567674 MORC1Q86VD1 984 aa15.28■□□□□ 0.04
CDH3-206ENST00000567674 MAP2P11137 1827 aaKnown RBP15.28■□□□□ 0.04
CDH3-206ENST00000567674 PER1O15534 1290 aaPredicted RBP15.27■□□□□ 0.04
CDH3-206ENST00000567674 AMER1Q5JTC6 1135 aaPredicted RBP15.27■□□□□ 0.04
CDH3-206ENST00000567674 PTF1AQ7RTS3 328 aa15.27■□□□□ 0.04
CDH3-206ENST00000567674 EYA1Q99502 592 aa15.27■□□□□ 0.04
CDH3-206ENST00000567674 PDGFDQ9GZP0 370 aaPredicted RBP15.27■□□□□ 0.04
CDH3-206ENST00000567674 PPM1GO15355 546 aaPredicted RBP15.26■□□□□ 0.03
CDH3-206ENST00000567674 PRIM1P49642 420 aaKnown RBP15.26■□□□□ 0.03
CDH3-206ENST00000567674 SLC16A10Q8TF71 515 aa15.26■□□□□ 0.03
CDH3-206ENST00000567674 ACSBG1Q96GR2 724 aa15.26■□□□□ 0.03
CDH3-206ENST00000567674 ATF5Q9Y2D1 282 aaPredicted RBP15.26■□□□□ 0.03
CDH3-206ENST00000567674 IGSF1Q8N6C5 1336 aa15.25■□□□□ 0.03
CDH3-206ENST00000567674 AMOTQ4VCS5 1084 aa15.25■□□□□ 0.03
CDH3-206ENST00000567674 MTFR1LQ9H019 292 aa15.25■□□□□ 0.03
CDH3-206ENST00000567674 MAP3K5Q99683 1374 aa15.24■□□□□ 0.03
CDH3-206ENST00000567674 HSP90AB1P08238 724 aaKnown RBP15.24■□□□□ 0.03
CDH3-206ENST00000567674 EIF4A2Q14240 407 aaKnown RBP15.24■□□□□ 0.03
CDH3-206ENST00000567674 IFNL2Q8IZJ0 200 aa15.24■□□□□ 0.03
CDH3-206ENST00000567674 SMARCC1Q92922 1105 aaPredicted RBP15.24■□□□□ 0.03
CDH3-206ENST00000567674 BTAF1O14981 1849 aa15.23■□□□□ 0.03
CDH3-206ENST00000567674 CYP27B1O15528 508 aa15.23■□□□□ 0.03
CDH3-206ENST00000567674 SGIP1Q9BQI5 828 aa15.23■□□□□ 0.03
CDH3-206ENST00000567674 RGPD2P0DJD1 1756 aa15.23■□□□□ 0.03
CDH3-206ENST00000567674 SHANK3Q9BYB0 1731 aa15.23■□□□□ 0.03
CDH3-206ENST00000567674 USHBP1Q8N6Y0 703 aa15.22■□□□□ 0.03
CDH3-206ENST00000567674 PKD1L3Q7Z443 1732 aa15.22■□□□□ 0.03
CDH3-206ENST00000567674 GPR162Q16538 588 aa15.21■□□□□ 0.03
CDH3-206ENST00000567674 AKT1S1Q96B36 256 aa15.21■□□□□ 0.03
CDH3-206ENST00000567674 SYTL4Q96C24 671 aaPredicted RBP15.21■□□□□ 0.03
CDH3-206ENST00000567674 PAPPAQ13219 1627 aa15.21■□□□□ 0.02
CDH3-206ENST00000567674 PLEKHO1Q53GL0 409 aaPredicted RBP15.2■□□□□ 0.02
CDH3-206ENST00000567674 FLAD1Q8NFF5 587 aa15.2■□□□□ 0.02
CDH3-206ENST00000567674 ARXQ96QS3 562 aa15.2■□□□□ 0.02
CDH3-206ENST00000567674 LRRC4BQ9NT99 713 aa15.2■□□□□ 0.02
CDH3-206ENST00000567674 KDRP35968 1356 aa15.2■□□□□ 0.02
CDH3-206ENST00000567674 KAT6BQ8WYB5 2073 aa15.2■□□□□ 0.02
CDH3-206ENST00000567674 ERVV-2B6SEH9 535 aa15.19■□□□□ 0.02
CDH3-206ENST00000567674 TNNT2P45379 298 aaPredicted RBP15.19■□□□□ 0.02
CDH3-206ENST00000567674 PHKG2P15735 406 aa15.18■□□□□ 0.02
CDH3-206ENST00000567674 DCAF5Q96JK2 942 aa15.18■□□□□ 0.02
CDH3-206ENST00000567674 LY75O60449 1722 aa15.17■□□□□ 0.02
CDH3-206ENST00000567674 QSER1Q2KHR3 1735 aa15.17■□□□□ 0.02
CDH3-206ENST00000567674 IL13P35225 146 aa15.17■□□□□ 0.02
CDH3-206ENST00000567674 CCNL1Q9UK58 526 aaPredicted RBP15.17■□□□□ 0.02
CDH3-206ENST00000567674 DOT1LQ8TEK3 1739 aa15.17■□□□□ 0.02
CDH3-206ENST00000567674 MPRIPQ6WCQ1 1025 aa15.15■□□□□ 0.02
CDH3-206ENST00000567674 TMOD3Q9NYL9 352 aa15.15■□□□□ 0.02
CDH3-206ENST00000567674 TFCP2L1Q9NZI6 479 aa15.15■□□□□ 0.02
CDH3-206ENST00000567674 MTHFSP49914 203 aa15.14■□□□□ 0.01
CDH3-206ENST00000567674 PIGBQ92521 554 aa15.14■□□□□ 0.01
CDH3-206ENST00000567674 PALLDQ8WX93 1383 aa15.13■□□□□ 0.01
CDH3-206ENST00000567674 DIAPH1O60610 1272 aaKnown RBP15.12■□□□□ 0.01
CDH3-206ENST00000567674 HSPA6P17066 643 aa15.12■□□□□ 0.01
CDH3-206ENST00000567674 ZNF827Q17R98 1081 aa15.12■□□□□ 0.01
CDH3-206ENST00000567674 C1orf141Q5JVX7 400 aa15.12■□□□□ 0.01
CDH3-206ENST00000567674 POLD1P28340 1107 aa15.11■□□□□ 0.01
CDH3-206ENST00000567674 AKAP4Q5JQC9 854 aa15.11■□□□□ 0.01
CDH3-206ENST00000567674 SULT6B1Q6IMI4 303 aa15.11■□□□□ 0.01
CDH3-206ENST00000567674 PNPLA7Q6ZV29 1317 aa15.11■□□□□ 0.01
CDH3-206ENST00000567674 GOLGB1Q14789 3259 aaKnown RBP15.11■□□□□ 0.01
CDH3-206ENST00000567674 LOC102724428A0A0B4J2F2 783 aa15.1■□□□□ 0.01
CDH3-206ENST00000567674 SIK1P57059 783 aa15.1■□□□□ 0.01
CDH3-206ENST00000567674 ZNF831Q5JPB2 1677 aa15.09■□□□□ 0.01
CDH3-206ENST00000567674 COL24A1Q17RW2 1714 aa15.09■□□□□ 0.01
CDH3-206ENST00000567674 ZNF530Q6P9A1 599 aaPredicted RBP15.09■□□□□ 0.01
CDH3-206ENST00000567674 PELP1Q8IZL8 1130 aaKnown RBP15.09■□□□□ 0.01
CDH3-206ENST00000567674 ITGB4P16144 1822 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms