RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 CASZ1Q86V15 1759 aa10.43□□□□□ -0.74
GINS3-207ENST00000567400 SMG6Q86US8 1419 aaKnown RBP10.42□□□□□ -0.74
GINS3-207ENST00000567400 NSD2O96028 1365 aa10.42□□□□□ -0.74
GINS3-207ENST00000567400 PANK3Q9H999 370 aa10.42□□□□□ -0.74
GINS3-207ENST00000567400 PKD1L3Q7Z443 1732 aa10.41□□□□□ -0.74
GINS3-207ENST00000567400 TXNRD1Q16881 649 aa10.41□□□□□ -0.74
GINS3-207ENST00000567400 DDX54Q8TDD1 881 aaKnown RBP10.41□□□□□ -0.74
GINS3-207ENST00000567400 POLKQ9UBT6 870 aa10.41□□□□□ -0.74
GINS3-207ENST00000567400 KIF7Q2M1P5 1343 aa10.4□□□□□ -0.74
GINS3-207ENST00000567400 PDGFDQ9GZP0 370 aaPredicted RBP10.4□□□□□ -0.74
GINS3-207ENST00000567400 WASHC2AQ641Q2 1341 aa10.39□□□□□ -0.75
GINS3-207ENST00000567400 TOGARAM1Q9Y4F4 1720 aa10.39□□□□□ -0.75
GINS3-207ENST00000567400 TNNT2P45379 298 aaPredicted RBP10.39□□□□□ -0.75
GINS3-207ENST00000567400 NBPF14Q5TI25 921 aa10.39□□□□□ -0.75
GINS3-207ENST00000567400 ZCRB1Q8TBF4 217 aaKnown RBP10.39□□□□□ -0.75
GINS3-207ENST00000567400 LRRC4BQ9NT99 713 aa10.39□□□□□ -0.75
GINS3-207ENST00000567400 LY75O60449 1722 aa10.38□□□□□ -0.75
GINS3-207ENST00000567400 PPM1GO15355 546 aaPredicted RBP10.38□□□□□ -0.75
GINS3-207ENST00000567400 CYP27B1O15528 508 aa10.37□□□□□ -0.75
GINS3-207ENST00000567400 PRIM1P49642 420 aaKnown RBP10.37□□□□□ -0.75
GINS3-207ENST00000567400 RAPGEF4Q8WZA2 1011 aa10.37□□□□□ -0.75
GINS3-207ENST00000567400 EYA1Q99502 592 aa10.37□□□□□ -0.75
GINS3-207ENST00000567400 KAT6BQ8WYB5 2073 aa10.37□□□□□ -0.75
GINS3-207ENST00000567400 EIF4A2Q14240 407 aaKnown RBP10.36□□□□□ -0.75
GINS3-207ENST00000567400 ZNF827Q17R98 1081 aa10.36□□□□□ -0.75
GINS3-207ENST00000567400 AMER1Q5JTC6 1135 aaPredicted RBP10.36□□□□□ -0.75
GINS3-207ENST00000567400 PCDH11XQ9BZA7 1347 aa10.35□□□□□ -0.75
GINS3-207ENST00000567400 PCDH11YQ9BZA8 1340 aa10.35□□□□□ -0.75
GINS3-207ENST00000567400 TUBGCP6Q96RT7 1819 aa10.35□□□□□ -0.75
GINS3-207ENST00000567400 TATP17735 454 aaPredicted RBP10.35□□□□□ -0.75
GINS3-207ENST00000567400 KCNQ4P56696 695 aa10.35□□□□□ -0.75
GINS3-207ENST00000567400 SLC15A2Q16348 729 aa10.35□□□□□ -0.75
GINS3-207ENST00000567400 SYTL4Q96C24 671 aaPredicted RBP10.35□□□□□ -0.75
GINS3-207ENST00000567400 ITGB4P16144 1822 aa10.35□□□□□ -0.75
GINS3-207ENST00000567400 IGSF1Q8N6C5 1336 aa10.34□□□□□ -0.75
GINS3-207ENST00000567400 PER1O15534 1290 aaPredicted RBP10.34□□□□□ -0.75
GINS3-207ENST00000567400 QSER1Q2KHR3 1735 aa10.33□□□□□ -0.76
GINS3-207ENST00000567400 ZBTB7AO95365 584 aa10.33□□□□□ -0.76
GINS3-207ENST00000567400 PTGER2P43116 358 aa10.33□□□□□ -0.76
GINS3-207ENST00000567400 AKT1S1Q96B36 256 aa10.33□□□□□ -0.76
GINS3-207ENST00000567400 SPON1Q9HCB6 807 aa10.33□□□□□ -0.76
GINS3-207ENST00000567400 STK32BQ9NY57 414 aa10.33□□□□□ -0.76
GINS3-207ENST00000567400 NKX1-1Q15270 411 aaPredicted RBP10.32□□□□□ -0.76
GINS3-207ENST00000567400 SLC27A3Q5K4L6 730 aa10.32□□□□□ -0.76
GINS3-207ENST00000567400 MORC1Q86VD1 984 aa10.32□□□□□ -0.76
GINS3-207ENST00000567400 SGIP1Q9BQI5 828 aa10.32□□□□□ -0.76
GINS3-207ENST00000567400 KNSTRNQ9Y448 316 aa10.32□□□□□ -0.76
GINS3-207ENST00000567400 UTRNP46939 3433 aa10.32□□□□□ -0.76
GINS3-207ENST00000567400 C5P01031 1676 aa10.31□□□□□ -0.76
GINS3-207ENST00000567400 PLEKHG2Q9H7P9 1386 aa10.31□□□□□ -0.76
GINS3-207ENST00000567400 COL24A1Q17RW2 1714 aa10.31□□□□□ -0.76
GINS3-207ENST00000567400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.31□□□□□ -0.76
GINS3-207ENST00000567400 TAF1LQ8IZX4 1826 aa10.3□□□□□ -0.76
GINS3-207ENST00000567400 AEBP1Q8IUX7 1158 aa10.3□□□□□ -0.76
GINS3-207ENST00000567400 PNPLA7Q6ZV29 1317 aa10.3□□□□□ -0.76
GINS3-207ENST00000567400 KDRP35968 1356 aa10.29□□□□□ -0.76
GINS3-207ENST00000567400 PALLDQ8WX93 1383 aa10.29□□□□□ -0.76
GINS3-207ENST00000567400 PHKG2P15735 406 aa10.29□□□□□ -0.76
GINS3-207ENST00000567400 PIGBQ92521 554 aa10.29□□□□□ -0.76
GINS3-207ENST00000567400 CCNL1Q9UK58 526 aaPredicted RBP10.29□□□□□ -0.76
GINS3-207ENST00000567400 SPG7Q9UQ90 795 aa10.29□□□□□ -0.76
GINS3-207ENST00000567400 ATF5Q9Y2D1 282 aaPredicted RBP10.29□□□□□ -0.76
GINS3-207ENST00000567400 GOLGB1Q14789 3259 aaKnown RBP10.29□□□□□ -0.76
GINS3-207ENST00000567400 KDM6AO15550 1401 aaPredicted RBP10.28□□□□□ -0.76
GINS3-207ENST00000567400 IL13P35225 146 aa10.28□□□□□ -0.76
GINS3-207ENST00000567400 MPRIPQ6WCQ1 1025 aa10.28□□□□□ -0.76
GINS3-207ENST00000567400 MTFR1LQ9H019 292 aa10.28□□□□□ -0.76
GINS3-207ENST00000567400 COL3A1P02461 1466 aaPredicted RBP10.28□□□□□ -0.76
GINS3-207ENST00000567400 NPC1L1Q9UHC9 1359 aa10.27□□□□□ -0.76
GINS3-207ENST00000567400 C4BP0C0L5 1744 aa10.27□□□□□ -0.76
GINS3-207ENST00000567400 MTHFSP49914 203 aa10.27□□□□□ -0.77
GINS3-207ENST00000567400 CC2D1BQ5T0F9 858 aaKnown RBP10.27□□□□□ -0.77
GINS3-207ENST00000567400 AMIGO3Q86WK7 504 aa10.27□□□□□ -0.77
GINS3-207ENST00000567400 IFNL2Q8IZJ0 200 aa10.26□□□□□ -0.77
GINS3-207ENST00000567400 PPP1R1BQ9UD71 204 aaPredicted RBP10.26□□□□□ -0.77
GINS3-207ENST00000567400 ASAP1Q9ULH1 1129 aa10.26□□□□□ -0.77
GINS3-207ENST00000567400 UBR3Q6ZT12 1888 aa10.25□□□□□ -0.77
GINS3-207ENST00000567400 SULT6B1Q6IMI4 303 aa10.25□□□□□ -0.77
GINS3-207ENST00000567400 TFCP2L1Q9NZI6 479 aa10.25□□□□□ -0.77
GINS3-207ENST00000567400 ZNF530Q6P9A1 599 aaPredicted RBP10.24□□□□□ -0.77
GINS3-207ENST00000567400 COL23A1Q86Y22 540 aaPredicted RBP10.24□□□□□ -0.77
GINS3-207ENST00000567400 FHDC1Q9C0D6 1143 aaPredicted RBP10.24□□□□□ -0.77
GINS3-207ENST00000567400 TMOD3Q9NYL9 352 aa10.24□□□□□ -0.77
GINS3-207ENST00000567400 ZNF831Q5JPB2 1677 aa10.23□□□□□ -0.77
GINS3-207ENST00000567400 ADAMTS7Q9UKP4 1686 aa10.23□□□□□ -0.77
GINS3-207ENST00000567400 LOC102724428A0A0B4J2F2 783 aa10.23□□□□□ -0.77
GINS3-207ENST00000567400 SIK1P57059 783 aa10.23□□□□□ -0.77
GINS3-207ENST00000567400 ITPK1Q13572 414 aa10.23□□□□□ -0.77
GINS3-207ENST00000567400 AMOTQ4VCS5 1084 aa10.23□□□□□ -0.77
GINS3-207ENST00000567400 PLEKHO1Q53GL0 409 aaPredicted RBP10.23□□□□□ -0.77
GINS3-207ENST00000567400 SMIM5Q71RC9 77 aa10.23□□□□□ -0.77
GINS3-207ENST00000567400 LINC00116Q8NCU8 138 aa10.23□□□□□ -0.77
GINS3-207ENST00000567400 SLC16A10Q8TF71 515 aa10.23□□□□□ -0.77
GINS3-207ENST00000567400 SMARCC1Q92922 1105 aaPredicted RBP10.23□□□□□ -0.77
GINS3-207ENST00000567400 DCAF5Q96JK2 942 aa10.23□□□□□ -0.77
GINS3-207ENST00000567400 SLC4A9Q96Q91 983 aa10.23□□□□□ -0.77
GINS3-207ENST00000567400 ATG3Q9NT62 314 aa10.23□□□□□ -0.77
GINS3-207ENST00000567400 SCN11AQ9UI33 1791 aa10.23□□□□□ -0.77
GINS3-207ENST00000567400 MAP3K5Q99683 1374 aa10.23□□□□□ -0.77
GINS3-207ENST00000567400 COL5A3P25940 1745 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms