RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 OVOS2A0A0G2JMS6 1433 aa20.32■□□□□ 0.84
COMMD4-219ENST00000567399 MEGF6O75095 1541 aa20.32■□□□□ 0.84
COMMD4-219ENST00000567399 TRIM37O94972 964 aa20.31■□□□□ 0.84
COMMD4-219ENST00000567399 MYBBP1AQ9BQG0 1328 aaKnown RBP20.3■□□□□ 0.84
COMMD4-219ENST00000567399 HMOX1P09601 288 aa20.3■□□□□ 0.84
COMMD4-219ENST00000567399 ANP32CO43423 234 aa20.29■□□□□ 0.84
COMMD4-219ENST00000567399 PLEKHO1Q53GL0 409 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-219ENST00000567399 AEBP1Q8IUX7 1158 aa20.29■□□□□ 0.84
COMMD4-219ENST00000567399 PRKRIP1Q9H875 184 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-219ENST00000567399 PCDH11XQ9BZA7 1347 aa20.28■□□□□ 0.84
COMMD4-219ENST00000567399 PCDH11YQ9BZA8 1340 aa20.28■□□□□ 0.84
COMMD4-219ENST00000567399 U2AF1L5P0DN76 240 aaPredicted RBP20.27■□□□□ 0.84
COMMD4-219ENST00000567399 U2AF1Q01081 240 aaKnown RBP eCLIP20.27■□□□□ 0.84
COMMD4-219ENST00000567399 ACSBG1Q96GR2 724 aa20.27■□□□□ 0.84
COMMD4-219ENST00000567399 AMOTQ4VCS5 1084 aa20.26■□□□□ 0.83
COMMD4-219ENST00000567399 NCAPD2Q15021 1401 aa20.26■□□□□ 0.83
COMMD4-219ENST00000567399 APBA3O96018 575 aa20.25■□□□□ 0.83
COMMD4-219ENST00000567399 BAG6P46379 1132 aa20.25■□□□□ 0.83
COMMD4-219ENST00000567399 SYTL4Q96C24 671 aaPredicted RBP20.25■□□□□ 0.83
COMMD4-219ENST00000567399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.25■□□□□ 0.83
COMMD4-219ENST00000567399 COL3A1P02461 1466 aaPredicted RBP20.24■□□□□ 0.83
COMMD4-219ENST00000567399 C1orf141Q5JVX7 400 aa20.23■□□□□ 0.83
COMMD4-219ENST00000567399 IFNL2Q8IZJ0 200 aa20.23■□□□□ 0.83
COMMD4-219ENST00000567399 NEFMP07197 916 aa20.22■□□□□ 0.83
COMMD4-219ENST00000567399 ZNF530Q6P9A1 599 aaPredicted RBP20.22■□□□□ 0.83
COMMD4-219ENST00000567399 BCL11BQ9C0K0 894 aaPredicted RBP20.22■□□□□ 0.83
COMMD4-219ENST00000567399 KDRP35968 1356 aa20.21■□□□□ 0.83
COMMD4-219ENST00000567399 RGPD1P0DJD0 1748 aa20.2■□□□□ 0.82
COMMD4-219ENST00000567399 CYP27B1O15528 508 aa20.2■□□□□ 0.82
COMMD4-219ENST00000567399 DEFB132Q7Z7B7 95 aa20.2■□□□□ 0.82
COMMD4-219ENST00000567399 KCNQ2O43526 872 aa20.19■□□□□ 0.82
COMMD4-219ENST00000567399 HSP90AB1P08238 724 aaKnown RBP20.19■□□□□ 0.82
COMMD4-219ENST00000567399 PHKG2P15735 406 aa20.19■□□□□ 0.82
COMMD4-219ENST00000567399 PLEKHG2Q9H7P9 1386 aa20.19■□□□□ 0.82
COMMD4-219ENST00000567399 BCL9O00512 1426 aa20.19■□□□□ 0.82
COMMD4-219ENST00000567399 PRKAR2BP31323 418 aa20.18■□□□□ 0.82
COMMD4-219ENST00000567399 PRIM1P49642 420 aaKnown RBP20.18■□□□□ 0.82
COMMD4-219ENST00000567399 EN1Q05925 392 aaPredicted RBP20.18■□□□□ 0.82
COMMD4-219ENST00000567399 WDR43Q15061 677 aaKnown RBP eCLIP20.18■□□□□ 0.82
COMMD4-219ENST00000567399 PNNQ9H307 717 aaKnown RBP20.18■□□□□ 0.82
COMMD4-219ENST00000567399 FCHSD2O94868 740 aa20.17■□□□□ 0.82
COMMD4-219ENST00000567399 PKD1L3Q7Z443 1732 aa20.16■□□□□ 0.82
COMMD4-219ENST00000567399 MPRIPQ6WCQ1 1025 aa20.15■□□□□ 0.82
COMMD4-219ENST00000567399 PTF1AQ7RTS3 328 aa20.15■□□□□ 0.82
COMMD4-219ENST00000567399 RSPH6AQ9H0K4 717 aa20.15■□□□□ 0.82
COMMD4-219ENST00000567399 SHANK3Q9BYB0 1731 aa20.14■□□□□ 0.81
COMMD4-219ENST00000567399 NKX1-1Q15270 411 aaPredicted RBP20.14■□□□□ 0.81
COMMD4-219ENST00000567399 MTHFSDQ2M296 383 aaKnown RBP20.14■□□□□ 0.81
COMMD4-219ENST00000567399 AKAP4Q5JQC9 854 aa20.14■□□□□ 0.81
COMMD4-219ENST00000567399 GAS2L2Q8NHY3 880 aa20.14■□□□□ 0.81
COMMD4-219ENST00000567399 EZH2Q15910 746 aaKnown RBP20.13■□□□□ 0.81
COMMD4-219ENST00000567399 DCAF5Q96JK2 942 aa20.13■□□□□ 0.81
COMMD4-219ENST00000567399 MAPK8IP3Q9UPT6 1336 aa20.12■□□□□ 0.81
COMMD4-219ENST00000567399 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
COMMD4-219ENST00000567399 SBF2Q86WG5 1849 aa20.11■□□□□ 0.81
COMMD4-219ENST00000567399 PLSCR1O15162 318 aa20.1■□□□□ 0.81
COMMD4-219ENST00000567399 CABP4P57796 275 aa20.1■□□□□ 0.81
COMMD4-219ENST00000567399 PHACTR3Q96KR7 559 aa20.1■□□□□ 0.81
COMMD4-219ENST00000567399 KAT6BQ8WYB5 2073 aa20.1■□□□□ 0.81
COMMD4-219ENST00000567399 TNS1Q9HBL0 1735 aaKnown RBP20.1■□□□□ 0.81
COMMD4-219ENST00000567399 NHSQ6T4R5 1651 aa20.1■□□□□ 0.81
COMMD4-219ENST00000567399 CAMKK2Q96RR4 588 aa20.09■□□□□ 0.81
COMMD4-219ENST00000567399 MRS2Q9HD23 443 aa20.09■□□□□ 0.81
COMMD4-219ENST00000567399 DOT1LQ8TEK3 1739 aa20.09■□□□□ 0.81
COMMD4-219ENST00000567399 GNAT3A8MTJ3 354 aa20.08■□□□□ 0.81
COMMD4-219ENST00000567399 ERVV-2B6SEH9 535 aa20.08■□□□□ 0.81
COMMD4-219ENST00000567399 RTF1Q92541 710 aaKnown RBP20.07■□□□□ 0.8
COMMD4-219ENST00000567399 PIGBQ92521 554 aa20.06■□□□□ 0.8
COMMD4-219ENST00000567399 RNMTO43148 476 aaKnown RBP20.05■□□□□ 0.8
COMMD4-219ENST00000567399 TXNRD1Q16881 649 aa20.05■□□□□ 0.8
COMMD4-219ENST00000567399 NBPF14Q5TI25 921 aa20.05■□□□□ 0.8
COMMD4-219ENST00000567399 SMARCC1Q92922 1105 aaPredicted RBP20.05■□□□□ 0.8
COMMD4-219ENST00000567399 LGR6Q9HBX8 967 aa20.05■□□□□ 0.8
COMMD4-219ENST00000567399 ADAMTS8Q9UP79 889 aa20.05■□□□□ 0.8
COMMD4-219ENST00000567399 MAP3K5Q99683 1374 aa20.05■□□□□ 0.8
COMMD4-219ENST00000567399 DIEXFQ68CQ4 756 aaKnown RBP20.04■□□□□ 0.8
COMMD4-219ENST00000567399 CCDC146Q8IYE0 955 aa20.04■□□□□ 0.8
COMMD4-219ENST00000567399 NFATC2IPQ8NCF5 419 aa20.04■□□□□ 0.8
COMMD4-219ENST00000567399 EP400Q96L91 3159 aa20.03■□□□□ 0.8
COMMD4-219ENST00000567399 TEFQ10587 303 aa20.03■□□□□ 0.8
COMMD4-219ENST00000567399 CCDC184Q52MB2 194 aa20.03■□□□□ 0.8
COMMD4-219ENST00000567399 PLEKHF1Q96S99 279 aa20.03■□□□□ 0.8
COMMD4-219ENST00000567399 BTAF1O14981 1849 aa20.03■□□□□ 0.8
COMMD4-219ENST00000567399 KDM6AO15550 1401 aaPredicted RBP20.02■□□□□ 0.8
COMMD4-219ENST00000567399 RUNDC1Q96C34 613 aa20.02■□□□□ 0.8
COMMD4-219ENST00000567399 NFE2L2Q16236 605 aa20.01■□□□□ 0.79
COMMD4-219ENST00000567399 SLC52A2Q9HAB3 445 aa20.01■□□□□ 0.79
COMMD4-219ENST00000567399 TOGARAM1Q9Y4F4 1720 aa20■□□□□ 0.79
COMMD4-219ENST00000567399 SLC27A3Q5K4L6 730 aa20■□□□□ 0.79
COMMD4-219ENST00000567399 CCNL1Q9UK58 526 aaPredicted RBP20■□□□□ 0.79
COMMD4-219ENST00000567399 PALLDQ8WX93 1383 aa19.99■□□□□ 0.79
COMMD4-219ENST00000567399 HTATSF1O43719 755 aaKnown RBP19.99■□□□□ 0.79
COMMD4-219ENST00000567399 NEUROD2Q15784 382 aa19.99■□□□□ 0.79
COMMD4-219ENST00000567399 PROM2Q8N271 834 aa19.99■□□□□ 0.79
COMMD4-219ENST00000567399 ASAP1Q9ULH1 1129 aa19.99■□□□□ 0.79
COMMD4-219ENST00000567399 ITGB4P16144 1822 aa19.98■□□□□ 0.79
COMMD4-219ENST00000567399 HMGB2P26583 209 aaKnown RBP19.98■□□□□ 0.79
COMMD4-219ENST00000567399 RIPK4P57078 832 aa19.98■□□□□ 0.79
COMMD4-219ENST00000567399 MCM10Q7L590 875 aa19.98■□□□□ 0.79
COMMD4-219ENST00000567399 IL17REQ8NFR9 667 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms