RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 USHBP1Q8N6Y0 703 aa22.82■■□□□ 1.24
PKD1-233ENST00000567355 BTAF1O14981 1849 aa22.8■■□□□ 1.24
PKD1-233ENST00000567355 ZCRB1Q8TBF4 217 aaKnown RBP22.8■■□□□ 1.24
PKD1-233ENST00000567355 DDX54Q8TDD1 881 aaKnown RBP22.8■■□□□ 1.24
PKD1-233ENST00000567355 ACSBG1Q96GR2 724 aa22.8■■□□□ 1.24
PKD1-233ENST00000567355 NBPF14Q5TI25 921 aa22.79■■□□□ 1.24
PKD1-233ENST00000567355 DOT1LQ8TEK3 1739 aa22.77■■□□□ 1.23
PKD1-233ENST00000567355 PPM1GO15355 546 aaPredicted RBP22.76■■□□□ 1.23
PKD1-233ENST00000567355 TXNRD1Q16881 649 aa22.76■■□□□ 1.23
PKD1-233ENST00000567355 RAPGEF4Q8WZA2 1011 aa22.76■■□□□ 1.23
PKD1-233ENST00000567355 ANO8Q9HCE9 1232 aaPredicted RBP22.76■■□□□ 1.23
PKD1-233ENST00000567355 PKD1L3Q7Z443 1732 aa22.76■■□□□ 1.23
PKD1-233ENST00000567355 TATP17735 454 aaPredicted RBP22.74■■□□□ 1.23
PKD1-233ENST00000567355 TNNT2P45379 298 aaPredicted RBP22.74■■□□□ 1.23
PKD1-233ENST00000567355 AMER1Q5JTC6 1135 aaPredicted RBP22.74■■□□□ 1.23
PKD1-233ENST00000567355 EYA1Q99502 592 aa22.74■■□□□ 1.23
PKD1-233ENST00000567355 PAPPAQ13219 1627 aa22.73■■□□□ 1.23
PKD1-233ENST00000567355 KNSTRNQ9Y448 316 aa22.73■■□□□ 1.23
PKD1-233ENST00000567355 PER1O15534 1290 aaPredicted RBP22.72■■□□□ 1.23
PKD1-233ENST00000567355 CASZ1Q86V15 1759 aa22.71■■□□□ 1.23
PKD1-233ENST00000567355 EIF4A2Q14240 407 aaKnown RBP22.71■■□□□ 1.23
PKD1-233ENST00000567355 MORC1Q86VD1 984 aa22.7■■□□□ 1.22
PKD1-233ENST00000567355 PCDH11XQ9BZA7 1347 aa22.7■■□□□ 1.22
PKD1-233ENST00000567355 PCDH11YQ9BZA8 1340 aa22.7■■□□□ 1.22
PKD1-233ENST00000567355 PRIM1P49642 420 aaKnown RBP22.69■■□□□ 1.22
PKD1-233ENST00000567355 PLEKHG2Q9H7P9 1386 aa22.68■■□□□ 1.22
PKD1-233ENST00000567355 CYP27B1O15528 508 aa22.68■■□□□ 1.22
PKD1-233ENST00000567355 KAT6BQ8WYB5 2073 aa22.68■■□□□ 1.22
PKD1-233ENST00000567355 LY75O60449 1722 aa22.68■■□□□ 1.22
PKD1-233ENST00000567355 IGSF1Q8N6C5 1336 aa22.67■■□□□ 1.22
PKD1-233ENST00000567355 TOGARAM1Q9Y4F4 1720 aa22.66■■□□□ 1.22
PKD1-233ENST00000567355 LRRC4BQ9NT99 713 aa22.66■■□□□ 1.22
PKD1-233ENST00000567355 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.66■■□□□ 1.22
PKD1-233ENST00000567355 NKX1-1Q15270 411 aaPredicted RBP22.65■■□□□ 1.22
PKD1-233ENST00000567355 SLC15A2Q16348 729 aa22.65■■□□□ 1.22
PKD1-233ENST00000567355 SLC27A3Q5K4L6 730 aa22.63■■□□□ 1.21
PKD1-233ENST00000567355 SYTL4Q96C24 671 aaPredicted RBP22.63■■□□□ 1.21
PKD1-233ENST00000567355 PDGFDQ9GZP0 370 aaPredicted RBP22.63■■□□□ 1.21
PKD1-233ENST00000567355 STK32BQ9NY57 414 aa22.63■■□□□ 1.21
PKD1-233ENST00000567355 NPC1L1Q9UHC9 1359 aa22.63■■□□□ 1.21
PKD1-233ENST00000567355 SPG7Q9UQ90 795 aa22.62■■□□□ 1.21
PKD1-233ENST00000567355 ITGB4P16144 1822 aa22.61■■□□□ 1.21
PKD1-233ENST00000567355 ZNF827Q17R98 1081 aa22.59■■□□□ 1.21
PKD1-233ENST00000567355 AKT1S1Q96B36 256 aa22.59■■□□□ 1.21
PKD1-233ENST00000567355 SPON1Q9HCB6 807 aa22.59■■□□□ 1.21
PKD1-233ENST00000567355 QSER1Q2KHR3 1735 aa22.59■■□□□ 1.21
PKD1-233ENST00000567355 IL13P35225 146 aa22.58■■□□□ 1.21
PKD1-233ENST00000567355 PHKG2P15735 406 aa22.57■■□□□ 1.2
PKD1-233ENST00000567355 KDRP35968 1356 aa22.57■■□□□ 1.2
PKD1-233ENST00000567355 CC2D1BQ5T0F9 858 aaKnown RBP22.55■■□□□ 1.2
PKD1-233ENST00000567355 IFNL2Q8IZJ0 200 aa22.55■■□□□ 1.2
PKD1-233ENST00000567355 MTHFSP49914 203 aa22.54■■□□□ 1.2
PKD1-233ENST00000567355 AEBP1Q8IUX7 1158 aa22.54■■□□□ 1.2
PKD1-233ENST00000567355 TUBGCP6Q96RT7 1819 aa22.54■■□□□ 1.2
PKD1-233ENST00000567355 KCNQ4P56696 695 aa22.53■■□□□ 1.2
PKD1-233ENST00000567355 MPRIPQ6WCQ1 1025 aa22.53■■□□□ 1.2
PKD1-233ENST00000567355 PIGBQ92521 554 aa22.53■■□□□ 1.2
PKD1-233ENST00000567355 ZBTB7AO95365 584 aa22.52■■□□□ 1.2
PKD1-233ENST00000567355 PTGER2P43116 358 aa22.52■■□□□ 1.2
PKD1-233ENST00000567355 CCNL1Q9UK58 526 aaPredicted RBP22.52■■□□□ 1.2
PKD1-233ENST00000567355 PALLDQ8WX93 1383 aa22.51■■□□□ 1.19
PKD1-233ENST00000567355 SGIP1Q9BQI5 828 aa22.51■■□□□ 1.19
PKD1-233ENST00000567355 C5P01031 1676 aa22.51■■□□□ 1.19
PKD1-233ENST00000567355 TAF1LQ8IZX4 1826 aa22.5■■□□□ 1.19
PKD1-233ENST00000567355 AMOTQ4VCS5 1084 aa22.5■■□□□ 1.19
PKD1-233ENST00000567355 PLEKHO1Q53GL0 409 aaPredicted RBP22.5■■□□□ 1.19
PKD1-233ENST00000567355 SULT6B1Q6IMI4 303 aa22.5■■□□□ 1.19
PKD1-233ENST00000567355 MTFR1LQ9H019 292 aa22.5■■□□□ 1.19
PKD1-233ENST00000567355 COL3A1P02461 1466 aaPredicted RBP22.49■■□□□ 1.19
PKD1-233ENST00000567355 COL24A1Q17RW2 1714 aa22.49■■□□□ 1.19
PKD1-233ENST00000567355 PNPLA7Q6ZV29 1317 aa22.49■■□□□ 1.19
PKD1-233ENST00000567355 SMARCC1Q92922 1105 aaPredicted RBP22.48■■□□□ 1.19
PKD1-233ENST00000567355 ATF5Q9Y2D1 282 aaPredicted RBP22.47■■□□□ 1.19
PKD1-233ENST00000567355 KDM6AO15550 1401 aaPredicted RBP22.47■■□□□ 1.19
PKD1-233ENST00000567355 DCAF5Q96JK2 942 aa22.46■■□□□ 1.19
PKD1-233ENST00000567355 TMOD3Q9NYL9 352 aa22.46■■□□□ 1.19
PKD1-233ENST00000567355 ERVV-2B6SEH9 535 aa22.45■■□□□ 1.18
PKD1-233ENST00000567355 HSP90AB1P08238 724 aaKnown RBP22.45■■□□□ 1.18
PKD1-233ENST00000567355 ZNF530Q6P9A1 599 aaPredicted RBP22.45■■□□□ 1.18
PKD1-233ENST00000567355 SLC16A10Q8TF71 515 aa22.44■■□□□ 1.18
PKD1-233ENST00000567355 TFCP2L1Q9NZI6 479 aa22.44■■□□□ 1.18
PKD1-233ENST00000567355 PPP1R1BQ9UD71 204 aaPredicted RBP22.44■■□□□ 1.18
PKD1-233ENST00000567355 DIAPH1O60610 1272 aaKnown RBP22.43■■□□□ 1.18
PKD1-233ENST00000567355 ASAP1Q9ULH1 1129 aa22.43■■□□□ 1.18
PKD1-233ENST00000567355 C4BP0C0L5 1744 aa22.43■■□□□ 1.18
PKD1-233ENST00000567355 HMGB2P26583 209 aaKnown RBP22.42■■□□□ 1.18
PKD1-233ENST00000567355 ATG3Q9NT62 314 aa22.42■■□□□ 1.18
PKD1-233ENST00000567355 ZNF831Q5JPB2 1677 aa22.42■■□□□ 1.18
PKD1-233ENST00000567355 LOC102724428A0A0B4J2F2 783 aa22.4■■□□□ 1.18
PKD1-233ENST00000567355 SIK1P57059 783 aa22.4■■□□□ 1.18
PKD1-233ENST00000567355 HMOX1P09601 288 aa22.39■■□□□ 1.17
PKD1-233ENST00000567355 C1orf141Q5JVX7 400 aa22.39■■□□□ 1.17
PKD1-233ENST00000567355 SCN11AQ9UI33 1791 aa22.39■■□□□ 1.17
PKD1-233ENST00000567355 CNGB1Q14028 1251 aaPredicted RBP22.38■■□□□ 1.17
PKD1-233ENST00000567355 COL23A1Q86Y22 540 aaPredicted RBP22.38■■□□□ 1.17
PKD1-233ENST00000567355 ADAMTS7Q9UKP4 1686 aa22.38■■□□□ 1.17
PKD1-233ENST00000567355 UBR3Q6ZT12 1888 aa22.38■■□□□ 1.17
PKD1-233ENST00000567355 UTRNP46939 3433 aa22.38■■□□□ 1.17
PKD1-233ENST00000567355 AKAP4Q5JQC9 854 aa22.37■■□□□ 1.17
PKD1-233ENST00000567355 ITPK1Q13572 414 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms