RNA–Protein interactions for RNA: ENST00000567019.1

EPB42-206, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best)

Gene EPB42, Length 1,628 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-206ENST00000567019 PLEKHG2Q9H7P9 1386 aa20.09■□□□□ 0.81
EPB42-206ENST00000567019 HTATSF1O43719 755 aaKnown RBP20.09■□□□□ 0.81
EPB42-206ENST00000567019 LARP1Q6PKG0 1096 aaKnown RBP20.09■□□□□ 0.81
EPB42-206ENST00000567019 TRMT2AQ8IZ69 625 aaKnown RBP20.09■□□□□ 0.81
EPB42-206ENST00000567019 CRB1P82279 1406 aa20.08■□□□□ 0.81
EPB42-206ENST00000567019 GNAT3A8MTJ3 354 aa20.08■□□□□ 0.8
EPB42-206ENST00000567019 DUSP27Q5VZP5 1158 aa20.08■□□□□ 0.8
EPB42-206ENST00000567019 SPINK5Q9NQ38 1064 aaPredicted RBP20.08■□□□□ 0.8
EPB42-206ENST00000567019 NWD2Q9ULI1 1742 aa20.07■□□□□ 0.8
EPB42-206ENST00000567019 SPG7Q9UQ90 795 aa20.06■□□□□ 0.8
EPB42-206ENST00000567019 MAP3K5Q99683 1374 aa20.06■□□□□ 0.8
EPB42-206ENST00000567019 ZNF530Q6P9A1 599 aaPredicted RBP20.05■□□□□ 0.8
EPB42-206ENST00000567019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.05■□□□□ 0.8
EPB42-206ENST00000567019 PARP4Q9UKK3 1724 aaKnown RBP20.05■□□□□ 0.8
EPB42-206ENST00000567019 C1orf141Q5JVX7 400 aa20.05■□□□□ 0.8
EPB42-206ENST00000567019 MEGF6O75095 1541 aa20.04■□□□□ 0.8
EPB42-206ENST00000567019 GNAI1P63096 354 aa20.04■□□□□ 0.8
EPB42-206ENST00000567019 DCTN1Q14203 1278 aa20.04■□□□□ 0.8
EPB42-206ENST00000567019 AKAP4Q5JQC9 854 aa20.04■□□□□ 0.8
EPB42-206ENST00000567019 MCM10Q7L590 875 aa20.04■□□□□ 0.8
EPB42-206ENST00000567019 THUMPD2Q9BTF0 503 aaKnown RBP20.04■□□□□ 0.8
EPB42-206ENST00000567019 NGLY1Q96IV0 654 aa20.03■□□□□ 0.8
EPB42-206ENST00000567019 C8orf37Q96NL8 207 aa20.03■□□□□ 0.8
EPB42-206ENST00000567019 IFT57Q9NWB7 429 aa20.03■□□□□ 0.8
EPB42-206ENST00000567019 NRAPQ86VF7 1730 aa20.03■□□□□ 0.8
EPB42-206ENST00000567019 IL2RBP14784 551 aa20.02■□□□□ 0.8
EPB42-206ENST00000567019 LAS1LQ9Y4W2 734 aaKnown RBP20.02■□□□□ 0.8
EPB42-206ENST00000567019 SLIT2O94813 1529 aa20.02■□□□□ 0.8
EPB42-206ENST00000567019 USP35Q9P2H5 1018 aa20.02■□□□□ 0.79
EPB42-206ENST00000567019 OVOS2A0A0G2JMS6 1433 aa20.01■□□□□ 0.79
EPB42-206ENST00000567019 MEX3CQ5U5Q3 659 aaKnown RBP20.01■□□□□ 0.79
EPB42-206ENST00000567019 PKD1L3Q7Z443 1732 aa20.01■□□□□ 0.79
EPB42-206ENST00000567019 CFAP44Q96MT7 982 aa20.01■□□□□ 0.79
EPB42-206ENST00000567019 RCAN3Q9UKA8 241 aa20■□□□□ 0.79
EPB42-206ENST00000567019 LRP6O75581 1613 aa20■□□□□ 0.79
EPB42-206ENST00000567019 FANCIQ9NVI1 1328 aa19.99■□□□□ 0.79
EPB42-206ENST00000567019 SUPT16HQ9Y5B9 1047 aaKnown RBP19.99■□□□□ 0.79
EPB42-206ENST00000567019 ZNF853P0CG23 659 aa19.98■□□□□ 0.79
EPB42-206ENST00000567019 UNC5CLQ8IV45 518 aa19.98■□□□□ 0.79
EPB42-206ENST00000567019 IFNL2Q8IZJ0 200 aa19.98■□□□□ 0.79
EPB42-206ENST00000567019 TSR2Q969E8 191 aaKnown RBP19.98■□□□□ 0.79
EPB42-206ENST00000567019 IL17REQ8NFR9 667 aa19.98■□□□□ 0.79
EPB42-206ENST00000567019 ZCRB1Q8TBF4 217 aaKnown RBP19.98■□□□□ 0.79
EPB42-206ENST00000567019 FNBP4Q8N3X1 1017 aaPredicted RBP19.97■□□□□ 0.79
EPB42-206ENST00000567019 THRAP3Q9Y2W1 955 aaKnown RBP19.97■□□□□ 0.79
EPB42-206ENST00000567019 LRRC37A3O60309 1634 aa19.96■□□□□ 0.79
EPB42-206ENST00000567019 VIRMAQ69YN4 1812 aaKnown RBP19.96■□□□□ 0.79
EPB42-206ENST00000567019 CCDC9Q9Y3X0 531 aaKnown RBP19.96■□□□□ 0.79
EPB42-206ENST00000567019 SPATA31A1Q5TZJ5 1347 aa19.95■□□□□ 0.78
EPB42-206ENST00000567019 PCDH11XQ9BZA7 1347 aa19.95■□□□□ 0.78
EPB42-206ENST00000567019 PCDH11YQ9BZA8 1340 aa19.95■□□□□ 0.78
EPB42-206ENST00000567019 HSP90AB1P08238 724 aaKnown RBP19.95■□□□□ 0.78
EPB42-206ENST00000567019 PHKG2P15735 406 aa19.95■□□□□ 0.78
EPB42-206ENST00000567019 MPRIPQ6WCQ1 1025 aa19.95■□□□□ 0.78
EPB42-206ENST00000567019 MBIPQ9NS73 344 aa19.95■□□□□ 0.78
EPB42-206ENST00000567019 CEMIPQ8WUJ3 1361 aa19.95■□□□□ 0.78
EPB42-206ENST00000567019 CDCA7Q9BWT1 371 aaPredicted RBP19.94■□□□□ 0.78
EPB42-206ENST00000567019 WNK3Q9BYP7 1800 aa19.94■□□□□ 0.78
EPB42-206ENST00000567019 SPATA31A5Q5VU36 1347 aa19.94■□□□□ 0.78
EPB42-206ENST00000567019 SPATA31A7Q8IWB4 1347 aa19.94■□□□□ 0.78
EPB42-206ENST00000567019 CHL1O00533 1208 aa19.94■□□□□ 0.78
EPB42-206ENST00000567019 RNMTO43148 476 aaKnown RBP19.94■□□□□ 0.78
EPB42-206ENST00000567019 CT47B1P0C2W7 299 aaPredicted RBP19.94■□□□□ 0.78
EPB42-206ENST00000567019 EXOSC9Q06265 439 aaKnown RBP19.94■□□□□ 0.78
EPB42-206ENST00000567019 TEFQ10587 303 aa19.94■□□□□ 0.78
EPB42-206ENST00000567019 TAF7Q15545 349 aaPredicted RBP19.94■□□□□ 0.78
EPB42-206ENST00000567019 USP21Q9UK80 565 aa19.94■□□□□ 0.78
EPB42-206ENST00000567019 BCL9LQ86UU0 1499 aa19.93■□□□□ 0.78
EPB42-206ENST00000567019 NEFLP07196 543 aa19.93■□□□□ 0.78
EPB42-206ENST00000567019 LGR6Q9HBX8 967 aa19.93■□□□□ 0.78
EPB42-206ENST00000567019 BABAM1Q9NWV8 329 aa19.93■□□□□ 0.78
EPB42-206ENST00000567019 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.93■□□□□ 0.78
EPB42-206ENST00000567019 CYP27B1O15528 508 aa19.92■□□□□ 0.78
EPB42-206ENST00000567019 VPS72Q15906 364 aa19.92■□□□□ 0.78
EPB42-206ENST00000567019 SCN11AQ9UI33 1791 aa19.92■□□□□ 0.78
EPB42-206ENST00000567019 DISP2A7MBM2 1401 aa19.92■□□□□ 0.78
EPB42-206ENST00000567019 PELP1Q8IZL8 1130 aaKnown RBP19.91■□□□□ 0.78
EPB42-206ENST00000567019 DCAF5Q96JK2 942 aa19.91■□□□□ 0.78
EPB42-206ENST00000567019 TSPYL4Q9UJ04 414 aa19.91■□□□□ 0.78
EPB42-206ENST00000567019 ADAMTS7Q9UKP4 1686 aa19.91■□□□□ 0.78
EPB42-206ENST00000567019 EXOC5O00471 708 aa19.9■□□□□ 0.78
EPB42-206ENST00000567019 DDX54Q8TDD1 881 aaKnown RBP19.9■□□□□ 0.78
EPB42-206ENST00000567019 SHANK3Q9BYB0 1731 aa19.89■□□□□ 0.77
EPB42-206ENST00000567019 BARGINQ6ZT62 677 aa19.89■□□□□ 0.77
EPB42-206ENST00000567019 FBXO41Q8TF61 875 aa19.89■□□□□ 0.77
EPB42-206ENST00000567019 MIS18AQ9NYP9 233 aa19.88■□□□□ 0.77
EPB42-206ENST00000567019 AFF2P51816 1311 aa19.88■□□□□ 0.77
EPB42-206ENST00000567019 KDM6AO15550 1401 aaPredicted RBP19.87■□□□□ 0.77
EPB42-206ENST00000567019 NKX1-1Q15270 411 aaPredicted RBP19.87■□□□□ 0.77
EPB42-206ENST00000567019 ZNF428Q96B54 188 aa19.87■□□□□ 0.77
EPB42-206ENST00000567019 RNF123Q5XPI4 1314 aa19.86■□□□□ 0.77
EPB42-206ENST00000567019 SIPA1L3O60292 1781 aaPredicted RBP19.86■□□□□ 0.77
EPB42-206ENST00000567019 BTBD11A6QL63 1104 aa19.86■□□□□ 0.77
EPB42-206ENST00000567019 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.86■□□□□ 0.77
EPB42-206ENST00000567019 RRP1P56182 461 aaKnown RBP19.85■□□□□ 0.77
EPB42-206ENST00000567019 DDB1Q16531 1140 aa19.85■□□□□ 0.77
EPB42-206ENST00000567019 TWISTNBQ3B726 338 aaPredicted RBP19.85■□□□□ 0.77
EPB42-206ENST00000567019 SLC52A2Q9HAB3 445 aa19.85■□□□□ 0.77
EPB42-206ENST00000567019 RARSP54136 660 aaKnown RBP19.84■□□□□ 0.77
EPB42-206ENST00000567019 TNS2Q63HR2 1409 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms