RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 PSDA5PKW4 1024 aaPredicted RBP17.33■□□□□ 0.36
LPCAT4-206ENST00000566581 KCNQ2O43526 872 aa17.33■□□□□ 0.36
LPCAT4-206ENST00000566581 R3HDM1Q15032 1099 aaKnown RBP17.33■□□□□ 0.36
LPCAT4-206ENST00000566581 NBPF14Q5TI25 921 aa17.33■□□□□ 0.36
LPCAT4-206ENST00000566581 DDX54Q8TDD1 881 aaKnown RBP17.33■□□□□ 0.36
LPCAT4-206ENST00000566581 NCAPD2Q15021 1401 aa17.32■□□□□ 0.36
LPCAT4-206ENST00000566581 PROM2Q8N271 834 aa17.32■□□□□ 0.36
LPCAT4-206ENST00000566581 USHBP1Q8N6Y0 703 aa17.32■□□□□ 0.36
LPCAT4-206ENST00000566581 TATP17735 454 aaPredicted RBP17.31■□□□□ 0.36
LPCAT4-206ENST00000566581 ACSBG1Q96GR2 724 aa17.31■□□□□ 0.36
LPCAT4-206ENST00000566581 LRP5O75197 1615 aa17.31■□□□□ 0.36
LPCAT4-206ENST00000566581 TNNT2P45379 298 aaPredicted RBP17.3■□□□□ 0.36
LPCAT4-206ENST00000566581 AMER1Q5JTC6 1135 aaPredicted RBP17.3■□□□□ 0.36
LPCAT4-206ENST00000566581 MORC1Q86VD1 984 aa17.3■□□□□ 0.36
LPCAT4-206ENST00000566581 PER1O15534 1290 aaPredicted RBP17.29■□□□□ 0.36
LPCAT4-206ENST00000566581 EYA1Q99502 592 aa17.29■□□□□ 0.36
LPCAT4-206ENST00000566581 PKD1L3Q7Z443 1732 aa17.29■□□□□ 0.36
LPCAT4-206ENST00000566581 DOT1LQ8TEK3 1739 aa17.29■□□□□ 0.36
LPCAT4-206ENST00000566581 TXNRD1Q16881 649 aa17.28■□□□□ 0.36
LPCAT4-206ENST00000566581 EIF4A2Q14240 407 aaKnown RBP17.27■□□□□ 0.36
LPCAT4-206ENST00000566581 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.26■□□□□ 0.35
LPCAT4-206ENST00000566581 PCDH11XQ9BZA7 1347 aa17.25■□□□□ 0.35
LPCAT4-206ENST00000566581 PCDH11YQ9BZA8 1340 aa17.25■□□□□ 0.35
LPCAT4-206ENST00000566581 PRIM1P49642 420 aaKnown RBP17.25■□□□□ 0.35
LPCAT4-206ENST00000566581 ITGB4P16144 1822 aa17.25■□□□□ 0.35
LPCAT4-206ENST00000566581 PLEKHG2Q9H7P9 1386 aa17.25■□□□□ 0.35
LPCAT4-206ENST00000566581 NPC1L1Q9UHC9 1359 aa17.24■□□□□ 0.35
LPCAT4-206ENST00000566581 LY75O60449 1722 aa17.24■□□□□ 0.35
LPCAT4-206ENST00000566581 CYP27B1O15528 508 aa17.23■□□□□ 0.35
LPCAT4-206ENST00000566581 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
LPCAT4-206ENST00000566581 SPG7Q9UQ90 795 aa17.23■□□□□ 0.35
LPCAT4-206ENST00000566581 IGSF1Q8N6C5 1336 aa17.22■□□□□ 0.35
LPCAT4-206ENST00000566581 NKX1-1Q15270 411 aaPredicted RBP17.22■□□□□ 0.35
LPCAT4-206ENST00000566581 SLC27A3Q5K4L6 730 aa17.21■□□□□ 0.35
LPCAT4-206ENST00000566581 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
LPCAT4-206ENST00000566581 CASZ1Q86V15 1759 aa17.2■□□□□ 0.34
LPCAT4-206ENST00000566581 STK32BQ9NY57 414 aa17.2■□□□□ 0.34
LPCAT4-206ENST00000566581 PAPPAQ13219 1627 aa17.2■□□□□ 0.34
LPCAT4-206ENST00000566581 SLC15A2Q16348 729 aa17.19■□□□□ 0.34
LPCAT4-206ENST00000566581 LRRC4BQ9NT99 713 aa17.19■□□□□ 0.34
LPCAT4-206ENST00000566581 TOGARAM1Q9Y4F4 1720 aa17.18■□□□□ 0.34
LPCAT4-206ENST00000566581 MTHFSP49914 203 aa17.17■□□□□ 0.34
LPCAT4-206ENST00000566581 QSER1Q2KHR3 1735 aa17.17■□□□□ 0.34
LPCAT4-206ENST00000566581 CC2D1BQ5T0F9 858 aaKnown RBP17.17■□□□□ 0.34
LPCAT4-206ENST00000566581 IL13P35225 146 aa17.16■□□□□ 0.34
LPCAT4-206ENST00000566581 IFNL2Q8IZJ0 200 aa17.16■□□□□ 0.34
LPCAT4-206ENST00000566581 SPON1Q9HCB6 807 aa17.16■□□□□ 0.34
LPCAT4-206ENST00000566581 TAF1LQ8IZX4 1826 aa17.15■□□□□ 0.34
LPCAT4-206ENST00000566581 PHKG2P15735 406 aa17.15■□□□□ 0.34
LPCAT4-206ENST00000566581 KDRP35968 1356 aa17.15■□□□□ 0.34
LPCAT4-206ENST00000566581 HMGB2P26583 209 aaKnown RBP17.14■□□□□ 0.33
LPCAT4-206ENST00000566581 AMOTQ4VCS5 1084 aa17.14■□□□□ 0.33
LPCAT4-206ENST00000566581 PLEKHO1Q53GL0 409 aaPredicted RBP17.14■□□□□ 0.33
LPCAT4-206ENST00000566581 MPRIPQ6WCQ1 1025 aa17.13■□□□□ 0.33
LPCAT4-206ENST00000566581 AKT1S1Q96B36 256 aa17.13■□□□□ 0.33
LPCAT4-206ENST00000566581 PDGFDQ9GZP0 370 aaPredicted RBP17.13■□□□□ 0.33
LPCAT4-206ENST00000566581 TUBGCP6Q96RT7 1819 aa17.12■□□□□ 0.33
LPCAT4-206ENST00000566581 SULT6B1Q6IMI4 303 aa17.12■□□□□ 0.33
LPCAT4-206ENST00000566581 PIGBQ92521 554 aa17.12■□□□□ 0.33
LPCAT4-206ENST00000566581 SMARCC1Q92922 1105 aaPredicted RBP17.12■□□□□ 0.33
LPCAT4-206ENST00000566581 HSP90AB1P08238 724 aaKnown RBP17.11■□□□□ 0.33
LPCAT4-206ENST00000566581 ZNF827Q17R98 1081 aa17.11■□□□□ 0.33
LPCAT4-206ENST00000566581 AEBP1Q8IUX7 1158 aa17.11■□□□□ 0.33
LPCAT4-206ENST00000566581 CCNL1Q9UK58 526 aaPredicted RBP17.11■□□□□ 0.33
LPCAT4-206ENST00000566581 DCAF5Q96JK2 942 aa17.1■□□□□ 0.33
LPCAT4-206ENST00000566581 C5P01031 1676 aa17.1■□□□□ 0.33
LPCAT4-206ENST00000566581 VIRMAQ69YN4 1812 aaKnown RBP17.1■□□□□ 0.33
LPCAT4-206ENST00000566581 ERVV-2B6SEH9 535 aa17.09■□□□□ 0.33
LPCAT4-206ENST00000566581 DIAPH1O60610 1272 aaKnown RBP17.09■□□□□ 0.33
LPCAT4-206ENST00000566581 KCNQ4P56696 695 aa17.09■□□□□ 0.33
LPCAT4-206ENST00000566581 TMOD3Q9NYL9 352 aa17.09■□□□□ 0.33
LPCAT4-206ENST00000566581 PALLDQ8WX93 1383 aa17.09■□□□□ 0.33
LPCAT4-206ENST00000566581 SCN11AQ9UI33 1791 aa17.08■□□□□ 0.33
LPCAT4-206ENST00000566581 ZNF530Q6P9A1 599 aaPredicted RBP17.08■□□□□ 0.32
LPCAT4-206ENST00000566581 MTFR1LQ9H019 292 aa17.08■□□□□ 0.32
LPCAT4-206ENST00000566581 ZBTB7AO95365 584 aa17.07■□□□□ 0.32
LPCAT4-206ENST00000566581 SLC16A10Q8TF71 515 aa17.07■□□□□ 0.32
LPCAT4-206ENST00000566581 COL24A1Q17RW2 1714 aa17.07■□□□□ 0.32
LPCAT4-206ENST00000566581 COL3A1P02461 1466 aaPredicted RBP17.06■□□□□ 0.32
LPCAT4-206ENST00000566581 PTGER2P43116 358 aa17.06■□□□□ 0.32
LPCAT4-206ENST00000566581 C1orf141Q5JVX7 400 aa17.06■□□□□ 0.32
LPCAT4-206ENST00000566581 TFCP2L1Q9NZI6 479 aa17.06■□□□□ 0.32
LPCAT4-206ENST00000566581 PNPLA7Q6ZV29 1317 aa17.05■□□□□ 0.32
LPCAT4-206ENST00000566581 PPP1R1BQ9UD71 204 aaPredicted RBP17.05■□□□□ 0.32
LPCAT4-206ENST00000566581 ASAP1Q9ULH1 1129 aa17.05■□□□□ 0.32
LPCAT4-206ENST00000566581 ATF5Q9Y2D1 282 aaPredicted RBP17.05■□□□□ 0.32
LPCAT4-206ENST00000566581 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
LPCAT4-206ENST00000566581 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
LPCAT4-206ENST00000566581 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
LPCAT4-206ENST00000566581 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
LPCAT4-206ENST00000566581 UBR3Q6ZT12 1888 aa17.03■□□□□ 0.32
LPCAT4-206ENST00000566581 LOC102724428A0A0B4J2F2 783 aa17.03■□□□□ 0.32
LPCAT4-206ENST00000566581 HMOX1P09601 288 aa17.03■□□□□ 0.32
LPCAT4-206ENST00000566581 SIK1P57059 783 aa17.03■□□□□ 0.32
LPCAT4-206ENST00000566581 ATG3Q9NT62 314 aa17.03■□□□□ 0.32
LPCAT4-206ENST00000566581 C4BP0C0L5 1744 aa17.03■□□□□ 0.32
LPCAT4-206ENST00000566581 AKAP4Q5JQC9 854 aa17.02■□□□□ 0.32
LPCAT4-206ENST00000566581 CFAP53Q96M91 514 aa17.02■□□□□ 0.32
LPCAT4-206ENST00000566581 PPP2R1AP30153 589 aa17.01■□□□□ 0.31
LPCAT4-206ENST00000566581 CABP4P57796 275 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 220.5 ms