RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 ZNF784Q8NCA9 323 aaPredicted RBP17.07■□□□□ 0.32
KLHDC4-216ENST00000566561 DDX54Q8TDD1 881 aaKnown RBP17.07■□□□□ 0.32
KLHDC4-216ENST00000566561 MTFR1LQ9H019 292 aa17.07■□□□□ 0.32
KLHDC4-216ENST00000566561 PPM1GO15355 546 aaPredicted RBP17.06■□□□□ 0.32
KLHDC4-216ENST00000566561 FHDC1Q9C0D6 1143 aaPredicted RBP17.06■□□□□ 0.32
KLHDC4-216ENST00000566561 QSER1Q2KHR3 1735 aa17.06■□□□□ 0.32
KLHDC4-216ENST00000566561 FLT4P35916 1363 aa17.05■□□□□ 0.32
KLHDC4-216ENST00000566561 HSP90AB2PQ58FF8 381 aa17.05■□□□□ 0.32
KLHDC4-216ENST00000566561 NBPF6Q5VWK0 638 aa17.05■□□□□ 0.32
KLHDC4-216ENST00000566561 USHBP1Q8N6Y0 703 aa17.05■□□□□ 0.32
KLHDC4-216ENST00000566561 NBPF4Q96M43 638 aa17.05■□□□□ 0.32
KLHDC4-216ENST00000566561 EMILIN1Q9Y6C2 1016 aa17.05■□□□□ 0.32
KLHDC4-216ENST00000566561 INSRP06213 1382 aa17.04■□□□□ 0.32
KLHDC4-216ENST00000566561 SYT17Q9BSW7 474 aa17.04■□□□□ 0.32
KLHDC4-216ENST00000566561 PANK3Q9H999 370 aa17.04■□□□□ 0.32
KLHDC4-216ENST00000566561 KIF20BQ96Q89 1820 aa17.04■□□□□ 0.32
KLHDC4-216ENST00000566561 KIF24Q5T7B8 1368 aa17.03■□□□□ 0.32
KLHDC4-216ENST00000566561 ZCRB1Q8TBF4 217 aaKnown RBP17.03■□□□□ 0.32
KLHDC4-216ENST00000566561 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
KLHDC4-216ENST00000566561 FAM208AQ9UK61 1670 aaKnown RBP17.03■□□□□ 0.32
KLHDC4-216ENST00000566561 MAP3K5Q99683 1374 aa17.02■□□□□ 0.31
KLHDC4-216ENST00000566561 TNNT2P45379 298 aaPredicted RBP17.01■□□□□ 0.31
KLHDC4-216ENST00000566561 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
KLHDC4-216ENST00000566561 TATP17735 454 aaPredicted RBP17■□□□□ 0.31
KLHDC4-216ENST00000566561 SYTL4Q96C24 671 aaPredicted RBP17■□□□□ 0.31
KLHDC4-216ENST00000566561 ARXQ96QS3 562 aa17■□□□□ 0.31
KLHDC4-216ENST00000566561 SGIP1Q9BQI5 828 aa17■□□□□ 0.31
KLHDC4-216ENST00000566561 TUBGCP6Q96RT7 1819 aa17■□□□□ 0.31
KLHDC4-216ENST00000566561 MEGF6O75095 1541 aa16.99■□□□□ 0.31
KLHDC4-216ENST00000566561 COL24A1Q17RW2 1714 aa16.99■□□□□ 0.31
KLHDC4-216ENST00000566561 POLKQ9UBT6 870 aa16.98■□□□□ 0.31
KLHDC4-216ENST00000566561 WASHC2AQ641Q2 1341 aa16.97■□□□□ 0.31
KLHDC4-216ENST00000566561 PRIM1P49642 420 aaKnown RBP16.96■□□□□ 0.31
KLHDC4-216ENST00000566561 KNSTRNQ9Y448 316 aa16.96■□□□□ 0.31
KLHDC4-216ENST00000566561 C1QTNF8P60827 252 aa16.95■□□□□ 0.3
KLHDC4-216ENST00000566561 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
KLHDC4-216ENST00000566561 DOT1LQ8TEK3 1739 aa16.95■□□□□ 0.3
KLHDC4-216ENST00000566561 NSD2O96028 1365 aa16.94■□□□□ 0.3
KLHDC4-216ENST00000566561 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
KLHDC4-216ENST00000566561 KIF7Q2M1P5 1343 aa16.94■□□□□ 0.3
KLHDC4-216ENST00000566561 PCDH11XQ9BZA7 1347 aa16.94■□□□□ 0.3
KLHDC4-216ENST00000566561 PCDH11YQ9BZA8 1340 aa16.94■□□□□ 0.3
KLHDC4-216ENST00000566561 GPR162Q16538 588 aa16.93■□□□□ 0.3
KLHDC4-216ENST00000566561 ZNF827Q17R98 1081 aa16.93■□□□□ 0.3
KLHDC4-216ENST00000566561 LY75O60449 1722 aa16.93■□□□□ 0.3
KLHDC4-216ENST00000566561 POLD1P28340 1107 aa16.92■□□□□ 0.3
KLHDC4-216ENST00000566561 KLHL34Q8N239 644 aa16.92■□□□□ 0.3
KLHDC4-216ENST00000566561 EYA1Q99502 592 aa16.92■□□□□ 0.3
KLHDC4-216ENST00000566561 EIF4A2Q14240 407 aaKnown RBP16.91■□□□□ 0.3
KLHDC4-216ENST00000566561 SLC16A10Q8TF71 515 aa16.91■□□□□ 0.3
KLHDC4-216ENST00000566561 GIGYF1O75420 1035 aaPredicted RBP16.9■□□□□ 0.3
KLHDC4-216ENST00000566561 SLC27A3Q5K4L6 730 aa16.9■□□□□ 0.3
KLHDC4-216ENST00000566561 LRRC4BQ9NT99 713 aa16.9■□□□□ 0.3
KLHDC4-216ENST00000566561 SPG7Q9UQ90 795 aa16.9■□□□□ 0.3
KLHDC4-216ENST00000566561 CYP27B1O15528 508 aa16.89■□□□□ 0.29
KLHDC4-216ENST00000566561 SHANK3Q9BYB0 1731 aa16.89■□□□□ 0.29
KLHDC4-216ENST00000566561 GOLGB1Q14789 3259 aaKnown RBP16.88■□□□□ 0.29
KLHDC4-216ENST00000566561 PELP1Q8IZL8 1130 aaKnown RBP16.88■□□□□ 0.29
KLHDC4-216ENST00000566561 NCAPD2Q15021 1401 aa16.87■□□□□ 0.29
KLHDC4-216ENST00000566561 ANKRD26Q9UPS8 1709 aa16.87■□□□□ 0.29
KLHDC4-216ENST00000566561 KCNQ4P56696 695 aa16.87■□□□□ 0.29
KLHDC4-216ENST00000566561 AKT1S1Q96B36 256 aa16.87■□□□□ 0.29
KLHDC4-216ENST00000566561 AMER1Q5JTC6 1135 aaPredicted RBP16.86■□□□□ 0.29
KLHDC4-216ENST00000566561 MPRIPQ6WCQ1 1025 aa16.86■□□□□ 0.29
KLHDC4-216ENST00000566561 PNPLA7Q6ZV29 1317 aa16.86■□□□□ 0.29
KLHDC4-216ENST00000566561 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.85■□□□□ 0.29
KLHDC4-216ENST00000566561 TFCP2L1Q9NZI6 479 aa16.85■□□□□ 0.29
KLHDC4-216ENST00000566561 CCNL1Q9UK58 526 aaPredicted RBP16.85■□□□□ 0.29
KLHDC4-216ENST00000566561 IGSF1Q8N6C5 1336 aa16.84■□□□□ 0.29
KLHDC4-216ENST00000566561 C5P01031 1676 aa16.84■□□□□ 0.29
KLHDC4-216ENST00000566561 MAP2P11137 1827 aaKnown RBP16.84■□□□□ 0.29
KLHDC4-216ENST00000566561 CC2D1BQ5T0F9 858 aaKnown RBP16.83■□□□□ 0.28
KLHDC4-216ENST00000566561 IFNL2Q8IZJ0 200 aa16.83■□□□□ 0.28
KLHDC4-216ENST00000566561 PER1O15534 1290 aaPredicted RBP16.82■□□□□ 0.28
KLHDC4-216ENST00000566561 CNGB1Q14028 1251 aaPredicted RBP16.82■□□□□ 0.28
KLHDC4-216ENST00000566561 NKX1-1Q15270 411 aaPredicted RBP16.82■□□□□ 0.28
KLHDC4-216ENST00000566561 PHKG2P15735 406 aa16.81■□□□□ 0.28
KLHDC4-216ENST00000566561 TAF1LQ8IZX4 1826 aa16.81■□□□□ 0.28
KLHDC4-216ENST00000566561 PALLDQ8WX93 1383 aa16.8■□□□□ 0.28
KLHDC4-216ENST00000566561 GRIN3BO60391 1043 aa16.8■□□□□ 0.28
KLHDC4-216ENST00000566561 PLEKHO1Q53GL0 409 aaPredicted RBP16.8■□□□□ 0.28
KLHDC4-216ENST00000566561 NLGN2Q8NFZ4 835 aa16.8■□□□□ 0.28
KLHDC4-216ENST00000566561 SMARCC1Q92922 1105 aaPredicted RBP16.8■□□□□ 0.28
KLHDC4-216ENST00000566561 PKD1L3Q7Z443 1732 aa16.79■□□□□ 0.28
KLHDC4-216ENST00000566561 MTHFSP49914 203 aa16.79■□□□□ 0.28
KLHDC4-216ENST00000566561 PIGBQ92521 554 aa16.79■□□□□ 0.28
KLHDC4-216ENST00000566561 TMOD3Q9NYL9 352 aa16.79■□□□□ 0.28
KLHDC4-216ENST00000566561 CEP350Q5VT06 3117 aa16.79■□□□□ 0.28
KLHDC4-216ENST00000566561 MSH5O43196 834 aa16.78■□□□□ 0.28
KLHDC4-216ENST00000566561 SULT6B1Q6IMI4 303 aa16.78■□□□□ 0.28
KLHDC4-216ENST00000566561 AEBP1Q8IUX7 1158 aa16.78■□□□□ 0.28
KLHDC4-216ENST00000566561 PLEKHG2Q9H7P9 1386 aa16.77■□□□□ 0.28
KLHDC4-216ENST00000566561 HMGB2P26583 209 aaKnown RBP16.77■□□□□ 0.28
KLHDC4-216ENST00000566561 IL13P35225 146 aa16.77■□□□□ 0.28
KLHDC4-216ENST00000566561 AMOTQ4VCS5 1084 aa16.77■□□□□ 0.28
KLHDC4-216ENST00000566561 IFFO2Q5TF58 517 aa16.77■□□□□ 0.28
KLHDC4-216ENST00000566561 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
KLHDC4-216ENST00000566561 ZNF530Q6P9A1 599 aaPredicted RBP16.76■□□□□ 0.27
KLHDC4-216ENST00000566561 C1orf141Q5JVX7 400 aa16.75■□□□□ 0.27
KLHDC4-216ENST00000566561 DCAF5Q96JK2 942 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms