RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 TATP17735 454 aaPredicted RBP26.01■■□□□ 1.75
CPNE7-208ENST00000566398 NUP188Q5SRE5 1749 aa26■■□□□ 1.75
CPNE7-208ENST00000566398 ANKRD26Q9UPS8 1709 aa26■■□□□ 1.75
CPNE7-208ENST00000566398 NHSQ6T4R5 1651 aa26■■□□□ 1.75
CPNE7-208ENST00000566398 MORC1Q86VD1 984 aa25.99■■□□□ 1.75
CPNE7-208ENST00000566398 RGPD2P0DJD1 1756 aa25.97■■□□□ 1.75
CPNE7-208ENST00000566398 TXNRD1Q16881 649 aa25.96■■□□□ 1.75
CPNE7-208ENST00000566398 NCAPD2Q15021 1401 aa25.96■■□□□ 1.75
CPNE7-208ENST00000566398 PROM2Q8N271 834 aa25.95■■□□□ 1.74
CPNE7-208ENST00000566398 PCDH11XQ9BZA7 1347 aa25.94■■□□□ 1.74
CPNE7-208ENST00000566398 PCDH11YQ9BZA8 1340 aa25.94■■□□□ 1.74
CPNE7-208ENST00000566398 AMER1Q5JTC6 1135 aaPredicted RBP25.94■■□□□ 1.74
CPNE7-208ENST00000566398 EIF4A2Q14240 407 aaKnown RBP25.93■■□□□ 1.74
CPNE7-208ENST00000566398 SYTL4Q96C24 671 aaPredicted RBP25.93■■□□□ 1.74
CPNE7-208ENST00000566398 EYA1Q99502 592 aa25.93■■□□□ 1.74
CPNE7-208ENST00000566398 ANO8Q9HCE9 1232 aaPredicted RBP25.93■■□□□ 1.74
CPNE7-208ENST00000566398 LRP5O75197 1615 aa25.92■■□□□ 1.74
CPNE7-208ENST00000566398 PRIM1P49642 420 aaKnown RBP25.91■■□□□ 1.74
CPNE7-208ENST00000566398 SHANK3Q9BYB0 1731 aa25.89■■□□□ 1.74
CPNE7-208ENST00000566398 STK32BQ9NY57 414 aa25.87■■□□□ 1.73
CPNE7-208ENST00000566398 MAP2P11137 1827 aaKnown RBP25.86■■□□□ 1.73
CPNE7-208ENST00000566398 PER1O15534 1290 aaPredicted RBP25.86■■□□□ 1.73
CPNE7-208ENST00000566398 SPG7Q9UQ90 795 aa25.86■■□□□ 1.73
CPNE7-208ENST00000566398 BTAF1O14981 1849 aa25.86■■□□□ 1.73
CPNE7-208ENST00000566398 IGSF1Q8N6C5 1336 aa25.86■■□□□ 1.73
CPNE7-208ENST00000566398 CYP27B1O15528 508 aa25.85■■□□□ 1.73
CPNE7-208ENST00000566398 DOT1LQ8TEK3 1739 aa25.84■■□□□ 1.73
CPNE7-208ENST00000566398 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.83■■□□□ 1.73
CPNE7-208ENST00000566398 PLEKHG2Q9H7P9 1386 aa25.82■■□□□ 1.72
CPNE7-208ENST00000566398 SLC15A2Q16348 729 aa25.82■■□□□ 1.72
CPNE7-208ENST00000566398 SLC27A3Q5K4L6 730 aa25.82■■□□□ 1.72
CPNE7-208ENST00000566398 CC2D1BQ5T0F9 858 aaKnown RBP25.82■■□□□ 1.72
CPNE7-208ENST00000566398 PKD1L3Q7Z443 1732 aa25.81■■□□□ 1.72
CPNE7-208ENST00000566398 LRRC4BQ9NT99 713 aa25.8■■□□□ 1.72
CPNE7-208ENST00000566398 NPC1L1Q9UHC9 1359 aa25.8■■□□□ 1.72
CPNE7-208ENST00000566398 SPON1Q9HCB6 807 aa25.78■■□□□ 1.72
CPNE7-208ENST00000566398 NKX1-1Q15270 411 aaPredicted RBP25.77■■□□□ 1.72
CPNE7-208ENST00000566398 PAPPAQ13219 1627 aa25.77■■□□□ 1.72
CPNE7-208ENST00000566398 MTHFSP49914 203 aa25.76■■□□□ 1.71
CPNE7-208ENST00000566398 MPRIPQ6WCQ1 1025 aa25.76■■□□□ 1.71
CPNE7-208ENST00000566398 IFNL2Q8IZJ0 200 aa25.76■■□□□ 1.71
CPNE7-208ENST00000566398 PHKG2P15735 406 aa25.75■■□□□ 1.71
CPNE7-208ENST00000566398 PDGFDQ9GZP0 370 aaPredicted RBP25.75■■□□□ 1.71
CPNE7-208ENST00000566398 IL13P35225 146 aa25.74■■□□□ 1.71
CPNE7-208ENST00000566398 CNGB1Q14028 1251 aaPredicted RBP25.74■■□□□ 1.71
CPNE7-208ENST00000566398 ZNF827Q17R98 1081 aa25.74■■□□□ 1.71
CPNE7-208ENST00000566398 CCNL1Q9UK58 526 aaPredicted RBP25.74■■□□□ 1.71
CPNE7-208ENST00000566398 AEBP1Q8IUX7 1158 aa25.73■■□□□ 1.71
CPNE7-208ENST00000566398 ZBTB7AO95365 584 aa25.72■■□□□ 1.71
CPNE7-208ENST00000566398 KCNQ4P56696 695 aa25.72■■□□□ 1.71
CPNE7-208ENST00000566398 PLEKHO1Q53GL0 409 aaPredicted RBP25.72■■□□□ 1.71
CPNE7-208ENST00000566398 SULT6B1Q6IMI4 303 aa25.72■■□□□ 1.71
CPNE7-208ENST00000566398 CASZ1Q86V15 1759 aa25.72■■□□□ 1.71
CPNE7-208ENST00000566398 PALLDQ8WX93 1383 aa25.71■■□□□ 1.71
CPNE7-208ENST00000566398 AMOTQ4VCS5 1084 aa25.71■■□□□ 1.71
CPNE7-208ENST00000566398 AKT1S1Q96B36 256 aa25.71■■□□□ 1.71
CPNE7-208ENST00000566398 PPP1R1BQ9UD71 204 aaPredicted RBP25.71■■□□□ 1.71
CPNE7-208ENST00000566398 KDRP35968 1356 aa25.7■■□□□ 1.71
CPNE7-208ENST00000566398 KAT6BQ8WYB5 2073 aa25.7■■□□□ 1.71
CPNE7-208ENST00000566398 TOGARAM1Q9Y4F4 1720 aa25.69■■□□□ 1.7
CPNE7-208ENST00000566398 PIGBQ92521 554 aa25.69■■□□□ 1.7
CPNE7-208ENST00000566398 SMARCC1Q92922 1105 aaPredicted RBP25.69■■□□□ 1.7
CPNE7-208ENST00000566398 TMOD3Q9NYL9 352 aa25.69■■□□□ 1.7
CPNE7-208ENST00000566398 ZNF530Q6P9A1 599 aaPredicted RBP25.68■■□□□ 1.7
CPNE7-208ENST00000566398 HSP90AB1P08238 724 aaKnown RBP25.67■■□□□ 1.7
CPNE7-208ENST00000566398 MTFR1LQ9H019 292 aa25.67■■□□□ 1.7
CPNE7-208ENST00000566398 DIAPH1O60610 1272 aaKnown RBP25.66■■□□□ 1.7
CPNE7-208ENST00000566398 TFCP2L1Q9NZI6 479 aa25.66■■□□□ 1.7
CPNE7-208ENST00000566398 LY75O60449 1722 aa25.66■■□□□ 1.7
CPNE7-208ENST00000566398 ATF5Q9Y2D1 282 aaPredicted RBP25.65■■□□□ 1.7
CPNE7-208ENST00000566398 HMGB2P26583 209 aaKnown RBP25.64■■□□□ 1.7
CPNE7-208ENST00000566398 C1orf141Q5JVX7 400 aa25.64■■□□□ 1.7
CPNE7-208ENST00000566398 DCAF5Q96JK2 942 aa25.64■■□□□ 1.7
CPNE7-208ENST00000566398 PNPLA7Q6ZV29 1317 aa25.62■■□□□ 1.69
CPNE7-208ENST00000566398 ERVV-2B6SEH9 535 aa25.61■■□□□ 1.69
CPNE7-208ENST00000566398 HMOX1P09601 288 aa25.61■■□□□ 1.69
CPNE7-208ENST00000566398 PTGER2P43116 358 aa25.61■■□□□ 1.69
CPNE7-208ENST00000566398 COL3A1P02461 1466 aaPredicted RBP25.6■■□□□ 1.69
CPNE7-208ENST00000566398 KDM6AO15550 1401 aaPredicted RBP25.6■■□□□ 1.69
CPNE7-208ENST00000566398 ASAP1Q9ULH1 1129 aa25.59■■□□□ 1.69
CPNE7-208ENST00000566398 SLC16A10Q8TF71 515 aa25.58■■□□□ 1.69
CPNE7-208ENST00000566398 LOC102724428A0A0B4J2F2 783 aa25.57■■□□□ 1.68
CPNE7-208ENST00000566398 SIK1P57059 783 aa25.57■■□□□ 1.68
CPNE7-208ENST00000566398 CFAP53Q96M91 514 aa25.57■■□□□ 1.68
CPNE7-208ENST00000566398 ITGB4P16144 1822 aa25.56■■□□□ 1.68
CPNE7-208ENST00000566398 U2SURPO15042 1029 aaKnown RBP25.56■■□□□ 1.68
CPNE7-208ENST00000566398 CABP4P57796 275 aa25.56■■□□□ 1.68
CPNE7-208ENST00000566398 ATG3Q9NT62 314 aa25.56■■□□□ 1.68
CPNE7-208ENST00000566398 SGIP1Q9BQI5 828 aa25.55■■□□□ 1.68
CPNE7-208ENST00000566398 MSH5O43196 834 aa25.54■■□□□ 1.68
CPNE7-208ENST00000566398 AKAP4Q5JQC9 854 aa25.54■■□□□ 1.68
CPNE7-208ENST00000566398 AK7Q96M32 723 aa25.54■■□□□ 1.68
CPNE7-208ENST00000566398 C5P01031 1676 aa25.53■■□□□ 1.68
CPNE7-208ENST00000566398 QSER1Q2KHR3 1735 aa25.52■■□□□ 1.68
CPNE7-208ENST00000566398 PPP2R1AP30153 589 aa25.52■■□□□ 1.68
CPNE7-208ENST00000566398 ATP6V1AP38606 617 aa25.51■■□□□ 1.67
CPNE7-208ENST00000566398 COL23A1Q86Y22 540 aaPredicted RBP25.51■■□□□ 1.67
CPNE7-208ENST00000566398 FLAD1Q8NFF5 587 aa25.51■■□□□ 1.67
CPNE7-208ENST00000566398 ARXQ96QS3 562 aa25.51■■□□□ 1.67
CPNE7-208ENST00000566398 POLD1P28340 1107 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms