RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 JMYQ8N9B5 988 aa8.94□□□□□ -0.98
UBE3A-205ENST00000566215 AXIN2Q9Y2T1 843 aa8.93□□□□□ -0.98
UBE3A-205ENST00000566215 SENP3-EIF4A1A0A087X0R7 540 aa8.93□□□□□ -0.98
UBE3A-205ENST00000566215 FAM182BQ5T319 152 aa8.93□□□□□ -0.98
UBE3A-205ENST00000566215 SBF1O95248 1867 aa8.92□□□□□ -0.98
UBE3A-205ENST00000566215 APLP1P51693 650 aa8.92□□□□□ -0.98
UBE3A-205ENST00000566215 KTN1Q86UP2 1357 aaKnown RBP8.92□□□□□ -0.98
UBE3A-205ENST00000566215 ZNF827Q17R98 1081 aa8.92□□□□□ -0.98
UBE3A-205ENST00000566215 IP6K1Q92551 441 aa8.92□□□□□ -0.98
UBE3A-205ENST00000566215 NKX1-1Q15270 411 aaPredicted RBP8.91□□□□□ -0.98
UBE3A-205ENST00000566215 NLRP6P59044 892 aa8.91□□□□□ -0.98
UBE3A-205ENST00000566215 TONSLQ96HA7 1378 aa8.91□□□□□ -0.98
UBE3A-205ENST00000566215 TJP1Q07157 1748 aa8.91□□□□□ -0.98
UBE3A-205ENST00000566215 VIRMAQ69YN4 1812 aaKnown RBP8.91□□□□□ -0.98
UBE3A-205ENST00000566215 TIAM2Q8IVF5 1701 aa8.91□□□□□ -0.98
UBE3A-205ENST00000566215 HIRIP3Q9BW71 556 aaPredicted RBP8.9□□□□□ -0.98
UBE3A-205ENST00000566215 FSTL1Q12841 308 aa8.9□□□□□ -0.98
UBE3A-205ENST00000566215 KDM2AQ9Y2K7 1162 aa8.9□□□□□ -0.98
UBE3A-205ENST00000566215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.89□□□□□ -0.998e-7■■■■□ 22.7
UBE3A-205ENST00000566215 MEGF6O75095 1541 aa8.89□□□□□ -0.99
UBE3A-205ENST00000566215 UBR2Q8IWV8 1755 aa8.89□□□□□ -0.99
UBE3A-205ENST00000566215 LRRC4BQ9NT99 713 aa8.89□□□□□ -0.99
UBE3A-205ENST00000566215 KDRP35968 1356 aa8.89□□□□□ -0.99
UBE3A-205ENST00000566215 RBM46Q8TBY0 533 aaKnown RBP8.89□□□□□ -0.99
UBE3A-205ENST00000566215 INSRP06213 1382 aa8.88□□□□□ -0.99
UBE3A-205ENST00000566215 ZBTB7AO95365 584 aa8.88□□□□□ -0.99
UBE3A-205ENST00000566215 CABP1Q9NZU7 370 aa8.88□□□□□ -0.99
UBE3A-205ENST00000566215 MRC1P22897 1456 aa8.88□□□□□ -0.99
UBE3A-205ENST00000566215 SCN11AQ9UI33 1791 aa8.88□□□□□ -0.99
UBE3A-205ENST00000566215 SSFA2P28290 1259 aa8.87□□□□□ -0.99
UBE3A-205ENST00000566215 SMARCC1Q92922 1105 aaPredicted RBP8.87□□□□□ -0.99
UBE3A-205ENST00000566215 ADAMTSL1Q8N6G6 1762 aa8.87□□□□□ -0.99
UBE3A-205ENST00000566215 TGFB2P61812 414 aa8.87□□□□□ -0.99
UBE3A-205ENST00000566215 SAFB2Q14151 953 aaKnown RBP eCLIP8.87□□□□□ -0.992e-6■■■□□ 15.5
UBE3A-205ENST00000566215 DNAJC5GQ8N7S2 189 aa8.87□□□□□ -0.99
UBE3A-205ENST00000566215 ADRA2BP18089 450 aa8.86□□□□□ -0.99
UBE3A-205ENST00000566215 SRPK2P78362 688 aaKnown RBP8.86□□□□□ -0.99
UBE3A-205ENST00000566215 PTF1AQ7RTS3 328 aa8.86□□□□□ -0.99
UBE3A-205ENST00000566215 N4BP2Q86UW6 1770 aaPredicted RBP8.86□□□□□ -0.99
UBE3A-205ENST00000566215 SCN7AQ01118 1682 aa8.86□□□□□ -0.99
UBE3A-205ENST00000566215 A0A1W2PP64 1363 aa8.85□□□□□ -0.99
UBE3A-205ENST00000566215 PDGFDQ9GZP0 370 aaPredicted RBP8.85□□□□□ -0.99
UBE3A-205ENST00000566215 KIF3CO14782 793 aa8.85□□□□□ -0.99
UBE3A-205ENST00000566215 YBX3P16989 372 aaKnown RBP eCLIP8.85□□□□□ -0.998e-7■■■□□ 17.1
UBE3A-205ENST00000566215 PCDH11XQ9BZA7 1347 aa8.85□□□□□ -0.99
UBE3A-205ENST00000566215 PCDH11YQ9BZA8 1340 aa8.85□□□□□ -0.99
UBE3A-205ENST00000566215 ANKRD24Q8TF21 1146 aa8.85□□□□□ -0.99
UBE3A-205ENST00000566215 RC3H1Q5TC82 1133 aaKnown RBP8.84□□□□□ -0.99
UBE3A-205ENST00000566215 ATF5Q9Y2D1 282 aaPredicted RBP8.84□□□□□ -0.99
UBE3A-205ENST00000566215 BCORQ6W2J9 1755 aa8.84□□□□□ -0.99
UBE3A-205ENST00000566215 SCN4AP35499 1836 aa8.84□□□□□ -0.99
UBE3A-205ENST00000566215 CABP2Q9NPB3 220 aa8.84□□□□□ -0.99
UBE3A-205ENST00000566215 USP47Q96K76 1375 aa8.84□□□□□ -0.99
UBE3A-205ENST00000566215 GPR162Q16538 588 aa8.83□□□□□ -1
UBE3A-205ENST00000566215 TERF2IPQ9NYB0 399 aa8.83□□□□□ -1
UBE3A-205ENST00000566215 SIPA1L3O60292 1781 aaPredicted RBP8.83□□□□□ -1
UBE3A-205ENST00000566215 FER1L6Q2WGJ9 1857 aa8.83□□□□□ -1
UBE3A-205ENST00000566215 TOMM70O94826 608 aa8.83□□□□□ -1
UBE3A-205ENST00000566215 NBPF1Q3BBV0 1214 aa8.82□□□□□ -1
UBE3A-205ENST00000566215 HDGFL2Q7Z4V5 671 aaPredicted RBP8.82□□□□□ -1
UBE3A-205ENST00000566215 CNTNAP4Q9C0A0 1308 aa8.82□□□□□ -1
UBE3A-205ENST00000566215 AFDNP55196 1824 aaKnown RBP8.82□□□□□ -1
UBE3A-205ENST00000566215 ROCK2O75116 1388 aaKnown RBP8.82□□□□□ -1
UBE3A-205ENST00000566215 COL23A1Q86Y22 540 aaPredicted RBP8.81□□□□□ -1
UBE3A-205ENST00000566215 PCDH10Q9P2E7 1040 aa8.81□□□□□ -1
UBE3A-205ENST00000566215 FLT4P35916 1363 aa8.81□□□□□ -1
UBE3A-205ENST00000566215 PRELPP51888 382 aa8.81□□□□□ -1
UBE3A-205ENST00000566215 ZCRB1Q8TBF4 217 aaKnown RBP8.81□□□□□ -1
UBE3A-205ENST00000566215 USP35Q9P2H5 1018 aa8.81□□□□□ -1
UBE3A-205ENST00000566215 HOXC9P31274 260 aa8.81□□□□□ -1
UBE3A-205ENST00000566215 PALLDQ8WX93 1383 aa8.8□□□□□ -1
UBE3A-205ENST00000566215 RGL2O15211 777 aa8.8□□□□□ -1
UBE3A-205ENST00000566215 NLGN2Q8NFZ4 835 aa8.8□□□□□ -1
UBE3A-205ENST00000566215 PDZRN3Q9UPQ7 1066 aa8.8□□□□□ -1
UBE3A-205ENST00000566215 NUTM2GQ5VZR2 741 aa8.79□□□□□ -1
UBE3A-205ENST00000566215 GPBP1L1Q9HC44 474 aaPredicted RBP8.79□□□□□ -1
UBE3A-205ENST00000566215 CCNL1Q9UK58 526 aaPredicted RBP8.79□□□□□ -1
UBE3A-205ENST00000566215 CSB-PGBD3P0DP91 1061 aa8.78□□□□□ -1
UBE3A-205ENST00000566215 KLRG1Q96E93 195 aa8.78□□□□□ -1
UBE3A-205ENST00000566215 KAT6BQ8WYB5 2073 aa8.78□□□□□ -1
UBE3A-205ENST00000566215 SLC34A2O95436 690 aa8.78□□□□□ -1
UBE3A-205ENST00000566215 TFCP2L1Q9NZI6 479 aa8.77□□□□□ -1
UBE3A-205ENST00000566215 IGSF1Q8N6C5 1336 aa8.77□□□□□ -1.01
UBE3A-205ENST00000566215 DCAF5Q96JK2 942 aa8.77□□□□□ -1.01
UBE3A-205ENST00000566215 LAMB1P07942 1786 aa8.76□□□□□ -1.01
UBE3A-205ENST00000566215 LTBP3Q9NS15 1303 aa8.76□□□□□ -1.01
UBE3A-205ENST00000566215 ANKRD31Q8N7Z5 1873 aa8.75□□□□□ -1.01
UBE3A-205ENST00000566215 TESK2Q96S53 571 aa8.75□□□□□ -1.01
UBE3A-205ENST00000566215 NLRP2Q9NX02 1062 aa8.75□□□□□ -1.01
UBE3A-205ENST00000566215 ERVV-2B6SEH9 535 aa8.74□□□□□ -1.01
UBE3A-205ENST00000566215 NLGN1Q8N2Q7 840 aa8.74□□□□□ -1.01
UBE3A-205ENST00000566215 MYH14Q7Z406 1995 aaKnown RBP8.74□□□□□ -1.01
UBE3A-205ENST00000566215 PRIM1P49642 420 aaKnown RBP8.74□□□□□ -1.01
UBE3A-205ENST00000566215 L3MBTL2Q969R5 705 aa8.74□□□□□ -1.01
UBE3A-205ENST00000566215 WASHC2AQ641Q2 1341 aa8.74□□□□□ -1.01
UBE3A-205ENST00000566215 KDM2BQ8NHM5 1336 aa8.74□□□□□ -1.01
UBE3A-205ENST00000566215 TATP17735 454 aaPredicted RBP8.73□□□□□ -1.01
UBE3A-205ENST00000566215 NME9Q86XW9 330 aa8.73□□□□□ -1.01
UBE3A-205ENST00000566215 COG3Q96JB2 828 aa8.73□□□□□ -1.01
UBE3A-205ENST00000566215 PRDM10Q9NQV6 1147 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms