RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 DYNC1I1O14576 645 aa12.61□□□□□ -0.39
USB1-212ENST00000566082 ADCY5O95622 1261 aa12.61□□□□□ -0.39
USB1-212ENST00000566082 TTC12Q9H892 705 aaPredicted RBP12.61□□□□□ -0.39
USB1-212ENST00000566082 CD2BP2O95400 341 aaKnown RBP12.61□□□□□ -0.39
USB1-212ENST00000566082 TPM3P06753 285 aa12.61□□□□□ -0.39
USB1-212ENST00000566082 STK3Q13188 491 aa12.61□□□□□ -0.39
USB1-212ENST00000566082 CAMK4Q16566 473 aa12.61□□□□□ -0.39
USB1-212ENST00000566082 KRT24Q2M2I5 525 aa12.61□□□□□ -0.39
USB1-212ENST00000566082 CCDC83Q8IWF9 413 aa12.61□□□□□ -0.39
USB1-212ENST00000566082 SLC52A1Q9NWF4 448 aa12.61□□□□□ -0.39
USB1-212ENST00000566082 MCM5P33992 734 aa12.6□□□□□ -0.39
USB1-212ENST00000566082 LARP1BQ659C4 914 aaKnown RBP12.6□□□□□ -0.39
USB1-212ENST00000566082 JAKMIP1Q96N16 626 aaKnown RBP12.6□□□□□ -0.39
USB1-212ENST00000566082 CEP170Q5SW79 1584 aa12.6□□□□□ -0.39
USB1-212ENST00000566082 RTEL1-TNFRSF6BF6WH68 1400 aa12.6□□□□□ -0.39
USB1-212ENST00000566082 SRGAP3O43295 1099 aa12.6□□□□□ -0.39
USB1-212ENST00000566082 G3BP1Q13283 466 aaKnown RBP eCLIP12.6□□□□□ -0.39
USB1-212ENST00000566082 HSP90AB4PQ58FF6 505 aa12.6□□□□□ -0.39
USB1-212ENST00000566082 CCDC183Q5T5S1 534 aa12.6□□□□□ -0.39
USB1-212ENST00000566082 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
USB1-212ENST00000566082 HOMER1Q86YM7 354 aa12.6□□□□□ -0.39
USB1-212ENST00000566082 TNMDQ9H2S6 317 aa12.6□□□□□ -0.39
USB1-212ENST00000566082 CYP46A1Q9Y6A2 500 aa12.6□□□□□ -0.39
USB1-212ENST00000566082 KRT85P78386 507 aa12.59□□□□□ -0.39
USB1-212ENST00000566082 ANKRD44Q8N8A2 993 aa12.59□□□□□ -0.39
USB1-212ENST00000566082 CHAMP1Q96JM3 812 aa12.59□□□□□ -0.39
USB1-212ENST00000566082 USP26Q9BXU7 913 aa12.59□□□□□ -0.39
USB1-212ENST00000566082 CASTP20810 708 aaKnown RBP12.59□□□□□ -0.39
USB1-212ENST00000566082 TNNT3P45378 269 aaPredicted RBP12.59□□□□□ -0.39
USB1-212ENST00000566082 CCAR2Q8N163 923 aaKnown RBP12.59□□□□□ -0.39
USB1-212ENST00000566082 DCTPP1Q9H773 170 aa12.59□□□□□ -0.39
USB1-212ENST00000566082 PKP1Q13835 747 aa12.59□□□□□ -0.39
USB1-212ENST00000566082 ZNF330Q9Y3S2 320 aaPredicted RBP12.59□□□□□ -0.39
USB1-212ENST00000566082 CCDC73Q6ZRK6 1079 aa12.58□□□□□ -0.4
USB1-212ENST00000566082 FSD1Q9BTV5 496 aa12.58□□□□□ -0.4
USB1-212ENST00000566082 SRCIN1Q9C0H9 1055 aa12.58□□□□□ -0.4
USB1-212ENST00000566082 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
USB1-212ENST00000566082 AIMP1Q12904 312 aaKnown RBP12.58□□□□□ -0.4
USB1-212ENST00000566082 GORABQ5T7V8 394 aa12.58□□□□□ -0.4
USB1-212ENST00000566082 FAM177BA6PVY3 158 aa12.58□□□□□ -0.4
USB1-212ENST00000566082 PDCP20941 246 aa12.58□□□□□ -0.4
USB1-212ENST00000566082 CCDC112Q8NEF3 446 aa12.58□□□□□ -0.4
USB1-212ENST00000566082 NOL7Q9UMY1 257 aaKnown RBP12.58□□□□□ -0.4
USB1-212ENST00000566082 ERBB4Q15303 1308 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 PDE1AP54750 535 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 GIMAP6Q6P9H5 292 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 NUP62CLQ9H1M0 184 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 PLA2R1Q13018 1463 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 PDRG1Q9NUG6 133 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 PLCH2O75038 1416 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 NLRP6P59044 892 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 HS1BP3Q53T59 392 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 PPP4R3BQ5MIZ7 849 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 USP48Q86UV5 1035 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 SDF4Q9BRK5 362 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 LMBRD1Q9NUN5 540 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 POLKQ9UBT6 870 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 ADGRL1O94910 1474 aa12.57□□□□□ -0.4
USB1-212ENST00000566082 KDM5DQ9BY66 1539 aa12.56□□□□□ -0.4
USB1-212ENST00000566082 NOLC1Q14978 699 aaKnown RBP eCLIP12.56□□□□□ -0.4
USB1-212ENST00000566082 SPG7Q9UQ90 795 aa12.56□□□□□ -0.4
USB1-212ENST00000566082 LRRFIP2Q9Y608 721 aaKnown RBP12.56□□□□□ -0.4
USB1-212ENST00000566082 PTPRTO14522 1441 aa12.56□□□□□ -0.4
USB1-212ENST00000566082 ZNF445P59923 1031 aa12.56□□□□□ -0.4
USB1-212ENST00000566082 FILIP1Q7Z7B0 1213 aa12.56□□□□□ -0.4
USB1-212ENST00000566082 CKAP2LQ8IYA6 745 aa12.56□□□□□ -0.4
USB1-212ENST00000566082 NUDT16Q96DE0 195 aaKnown RBP12.56□□□□□ -0.4
USB1-212ENST00000566082 CCDC61Q9Y6R9 512 aa12.56□□□□□ -0.4
USB1-212ENST00000566082 ABCC2Q92887 1545 aa12.56□□□□□ -0.4
USB1-212ENST00000566082 PSMA5P28066 241 aa12.56□□□□□ -0.4
USB1-212ENST00000566082 CNPY2Q9Y2B0 182 aa12.56□□□□□ -0.4
USB1-212ENST00000566082 A0A1W2PP64 1363 aa12.56□□□□□ -0.4
USB1-212ENST00000566082 AEBP1Q8IUX7 1158 aa12.55□□□□□ -0.4
USB1-212ENST00000566082 MAP3K11Q16584 847 aa12.55□□□□□ -0.4
USB1-212ENST00000566082 C16orf45Q96MC5 204 aaPredicted RBP12.55□□□□□ -0.4
USB1-212ENST00000566082 TMEM63CQ9P1W3 806 aa12.55□□□□□ -0.4
USB1-212ENST00000566082 ZRANB1Q9UGI0 708 aa12.55□□□□□ -0.4
USB1-212ENST00000566082 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.55□□□□□ -0.43e-8■■□□□ 14.4
USB1-212ENST00000566082 PRPF40BQ6NWY9 871 aaKnown RBP12.55□□□□□ -0.4
USB1-212ENST00000566082 CEP85Q6P2H3 762 aa12.55□□□□□ -0.4
USB1-212ENST00000566082 SPATA32Q96LK8 384 aa12.55□□□□□ -0.4
USB1-212ENST00000566082 STX6O43752 255 aa12.54□□□□□ -0.4
USB1-212ENST00000566082 ESYT1Q9BSJ8 1104 aa12.54□□□□□ -0.4
USB1-212ENST00000566082 PPP1R9BQ96SB3 815 aa12.54□□□□□ -0.4
USB1-212ENST00000566082 LIMCH1Q9UPQ0 1083 aa12.54□□□□□ -0.4
USB1-212ENST00000566082 LRRIQ1Q96JM4 1722 aa12.54□□□□□ -0.4
USB1-212ENST00000566082 GSPT1P15170 499 aaKnown RBP12.54□□□□□ -0.4
USB1-212ENST00000566082 NEXNQ0ZGT2 675 aa12.54□□□□□ -0.4
USB1-212ENST00000566082 SIL1Q9H173 461 aa12.54□□□□□ -0.4
USB1-212ENST00000566082 PODXL2Q9NZ53 605 aa12.54□□□□□ -0.4
USB1-212ENST00000566082 KINO60870 393 aaKnown RBP12.53□□□□□ -0.4
USB1-212ENST00000566082 DTNBO60941 627 aa12.53□□□□□ -0.4
USB1-212ENST00000566082 C1orf141Q5JVX7 400 aa12.53□□□□□ -0.4
USB1-212ENST00000566082 ABCC10Q5T3U5 1492 aa12.53□□□□□ -0.4
USB1-212ENST00000566082 ZMYM3Q14202 1370 aa12.53□□□□□ -0.4
USB1-212ENST00000566082 BLOC1S2Q6QNY1 142 aa12.53□□□□□ -0.4
USB1-212ENST00000566082 CREBRFQ8IUR6 639 aa12.53□□□□□ -0.4
USB1-212ENST00000566082 C17orf53Q8N3J3 647 aaPredicted RBP12.53□□□□□ -0.4
USB1-212ENST00000566082 TFIP11Q9UBB9 837 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms