RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 TMEM87AQ8NBN3 555 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 KDM5DQ9BY66 1539 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 PLA2R1Q13018 1463 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 RNF214Q8ND24 703 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 USP25Q9UHP3 1055 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 PTPRCP08575 1304 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 ZNF644Q9H582 1327 aaPredicted RBP3.48□□□□□ -1.85
CHD9-218ENST00000566029 CCDC27Q2M243 656 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 BCORL1Q5H9F3 1711 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 NUP155O75694 1391 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 SCAF11Q99590 1463 aaKnown RBP3.48□□□□□ -1.85
CHD9-218ENST00000566029 NESP48681 1621 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 ZRANB2O95218 330 aaKnown RBP eCLIP3.48□□□□□ -1.85
CHD9-218ENST00000566029 ERCC3P19447 782 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 ZKSCAN2Q63HK3 967 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 CCDC146Q8IYE0 955 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 IL17RAQ96F46 866 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 GOPCQ9HD26 462 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 SSR1P43307 286 aaKnown RBP3.48□□□□□ -1.85
CHD9-218ENST00000566029 ABCA10Q8WWZ4 1543 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 PHF14O94880 888 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 RASSF4Q9H2L5 321 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 TBC1D9Q6ZT07 1266 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 POGZQ7Z3K3 1410 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 LOC102724159A0A0B4J2E5 919 aa3.48□□□□□ -1.85
CHD9-218ENST00000566029 PWP2Q15269 919 aaKnown RBP3.48□□□□□ -1.85
CHD9-218ENST00000566029 CUL4AQ13619 759 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 CT47A1Q5JQC4 288 aaPredicted RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 BANK1Q8NDB2 785 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 ERO1AQ96HE7 468 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 KIF14Q15058 1648 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 GADD45BO75293 160 aaPredicted RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 SATB1Q01826 763 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 KIAA0586Q9BVV6 1533 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 WDR63Q8IWG1 891 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 DRC7Q8IY82 874 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 FHOD1Q9Y613 1164 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 A0A1B0GUL7 405 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 PRR29P0C7W0 189 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 PLA2G4AP47712 749 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 ZGPATQ8N5A5 531 aaKnown RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 KIF1BPQ96EK5 621 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 RTL1A6NKG5 1358 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 ARID4AP29374 1257 aaPredicted RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 CEP120Q8N960 986 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 FYB1O15117 783 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 SWT1Q5T5J6 900 aaKnown RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 SMARCE1Q969G3 411 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 RRP15Q9Y3B9 282 aaKnown RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 LCMT1Q9UIC8 334 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 RPAP1Q9BWH6 1393 aaPredicted RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 ADCY5O95622 1261 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 MYOM2P54296 1465 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 GSCP56915 257 aaPredicted RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 TMF1P82094 1093 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 BMS1Q14692 1282 aaKnown RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 RNF20Q5VTR2 975 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 FBXO38Q6PIJ6 1188 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 CHD1LQ86WJ1 897 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 PIK3R4Q99570 1358 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 CT47B1P0C2W7 299 aaPredicted RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 FOXD4L6Q3SYB3 417 aaPredicted RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 CTR9Q6PD62 1173 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 FOXD4L3Q6VB84 417 aaPredicted RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 ZBTB12Q9Y330 459 aaPredicted RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 CEP83Q9Y592 693 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.47□□□□□ -1.85
CHD9-218ENST00000566029 CNKSR2Q8WXI2 1034 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 SLC26A8Q96RN1 970 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 CENPHQ9H3R5 247 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 ZBTB40Q9NUA8 1239 aa3.47□□□□□ -1.85
CHD9-218ENST00000566029 CCDC189A1A4V9 331 aa3.46□□□□□ -1.85
CHD9-218ENST00000566029 GJC2Q5T442 439 aaPredicted RBP3.46□□□□□ -1.85
CHD9-218ENST00000566029 ATP10AO60312 1499 aa3.46□□□□□ -1.85
CHD9-218ENST00000566029 NYAP1Q6ZVC0 841 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 DCAF8L1A6NGE4 600 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 H2AFXP16104 143 aaPredicted RBP3.46□□□□□ -1.86
CHD9-218ENST00000566029 LMOD3Q0VAK6 560 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 TXLNBQ8N3L3 684 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 SYAP1Q96A49 352 aaPredicted RBP3.46□□□□□ -1.86
CHD9-218ENST00000566029 L2HGDHQ9H9P8 463 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 CCDC141Q6ZP82 1450 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 TCP11L2Q8N4U5 519 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 TDRD7Q8NHU6 1098 aaKnown RBP3.46□□□□□ -1.86
CHD9-218ENST00000566029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.46□□□□□ -1.861e-7■■■■□ 23.5
CHD9-218ENST00000566029 DDX19BQ9UMR2 479 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 SLU7O95391 586 aaKnown RBP3.46□□□□□ -1.86
CHD9-218ENST00000566029 CCDC186Q7Z3E2 898 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 LNPKQ9C0E8 428 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 MAGI1Q96QZ7 1491 aaPredicted RBP3.46□□□□□ -1.86
CHD9-218ENST00000566029 NOS1P29475 1434 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 ATP8B1O43520 1251 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 RAD51AP2Q09MP3 1159 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 PKP1Q13835 747 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 PABPN1Q86U42 306 aaKnown RBP eCLIP3.46□□□□□ -1.86
CHD9-218ENST00000566029 RUNDC1Q96C34 613 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 KNSTRNQ9Y448 316 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 GCC2Q8IWJ2 1684 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 ATAD2Q6PL18 1390 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms