RNA–Protein interactions for RNA: ENST00000565704.5

GDPD3-203, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 2

Gene GDPD3, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-203ENST00000565704 C8orf37Q96NL8 207 aa17.98■□□□□ 0.47
GDPD3-203ENST00000565704 HTATSF1O43719 755 aaKnown RBP17.97■□□□□ 0.47
GDPD3-203ENST00000565704 PDE3BQ13370 1112 aa17.97■□□□□ 0.47
GDPD3-203ENST00000565704 PLEKHO1Q53GL0 409 aaPredicted RBP17.97■□□□□ 0.47
GDPD3-203ENST00000565704 WDR63Q8IWG1 891 aa17.97■□□□□ 0.47
GDPD3-203ENST00000565704 GAS2L2Q8NHY3 880 aa17.97■□□□□ 0.47
GDPD3-203ENST00000565704 OVOS2A0A0G2JMS6 1433 aa17.97■□□□□ 0.47
GDPD3-203ENST00000565704 NEFMP07197 916 aa17.96■□□□□ 0.47
GDPD3-203ENST00000565704 THRAP3Q9Y2W1 955 aaKnown RBP17.96■□□□□ 0.47
GDPD3-203ENST00000565704 SALL2Q9Y467 1007 aaPredicted RBP17.96■□□□□ 0.47
GDPD3-203ENST00000565704 IL2RBP14784 551 aa17.95■□□□□ 0.46
GDPD3-203ENST00000565704 TATP17735 454 aaPredicted RBP17.95■□□□□ 0.46
GDPD3-203ENST00000565704 NEUROD2Q15784 382 aa17.95■□□□□ 0.46
GDPD3-203ENST00000565704 RAPGEF4Q8WZA2 1011 aa17.95■□□□□ 0.46
GDPD3-203ENST00000565704 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.95■□□□□ 0.46
GDPD3-203ENST00000565704 BARGINQ6ZT62 677 aa17.94■□□□□ 0.46
GDPD3-203ENST00000565704 SPINK5Q9NQ38 1064 aaPredicted RBP17.94■□□□□ 0.46
GDPD3-203ENST00000565704 DLG5Q8TDM6 1919 aa17.94■□□□□ 0.46
GDPD3-203ENST00000565704 PKD1L3Q7Z443 1732 aa17.93■□□□□ 0.46
GDPD3-203ENST00000565704 SLFN5Q08AF3 891 aa17.93■□□□□ 0.46
GDPD3-203ENST00000565704 CDCA7LQ96GN5 454 aa17.93■□□□□ 0.46
GDPD3-203ENST00000565704 USP21Q9UK80 565 aa17.93■□□□□ 0.46
GDPD3-203ENST00000565704 IL16Q14005 1332 aa17.93■□□□□ 0.46
GDPD3-203ENST00000565704 ATRNO75882 1429 aa17.92■□□□□ 0.46
GDPD3-203ENST00000565704 ZNF853P0CG23 659 aa17.92■□□□□ 0.46
GDPD3-203ENST00000565704 GOLGA2Q08379 1002 aa17.92■□□□□ 0.46
GDPD3-203ENST00000565704 AKAP4Q5JQC9 854 aa17.92■□□□□ 0.46
GDPD3-203ENST00000565704 IL17REQ8NFR9 667 aa17.92■□□□□ 0.46
GDPD3-203ENST00000565704 AFF2P51816 1311 aa17.92■□□□□ 0.46
GDPD3-203ENST00000565704 GNAT3A8MTJ3 354 aa17.91■□□□□ 0.46
GDPD3-203ENST00000565704 CYP27B1O15528 508 aa17.91■□□□□ 0.46
GDPD3-203ENST00000565704 LMOD3Q0VAK6 560 aa17.91■□□□□ 0.46
GDPD3-203ENST00000565704 SPG7Q9UQ90 795 aa17.91■□□□□ 0.46
GDPD3-203ENST00000565704 CEMIPQ8WUJ3 1361 aa17.91■□□□□ 0.46
GDPD3-203ENST00000565704 ONECUT3O60422 494 aaPredicted RBP17.9■□□□□ 0.46
GDPD3-203ENST00000565704 NKX1-1Q15270 411 aaPredicted RBP17.9■□□□□ 0.46
GDPD3-203ENST00000565704 MEX3CQ5U5Q3 659 aaKnown RBP17.9■□□□□ 0.46
GDPD3-203ENST00000565704 ZNF530Q6P9A1 599 aaPredicted RBP17.9■□□□□ 0.46
GDPD3-203ENST00000565704 ZCRB1Q8TBF4 217 aaKnown RBP17.9■□□□□ 0.46
GDPD3-203ENST00000565704 CDCA7Q9BWT1 371 aaPredicted RBP17.9■□□□□ 0.46
GDPD3-203ENST00000565704 MAP3K5Q99683 1374 aa17.9■□□□□ 0.46
GDPD3-203ENST00000565704 ADAMTS7Q9UKP4 1686 aa17.9■□□□□ 0.46
GDPD3-203ENST00000565704 PHKG2P15735 406 aa17.89■□□□□ 0.45
GDPD3-203ENST00000565704 DCTN1Q14203 1278 aa17.89■□□□□ 0.45
GDPD3-203ENST00000565704 DUSP27Q5VZP5 1158 aa17.89■□□□□ 0.45
GDPD3-203ENST00000565704 USP35Q9P2H5 1018 aa17.89■□□□□ 0.45
GDPD3-203ENST00000565704 PARP4Q9UKK3 1724 aaKnown RBP17.89■□□□□ 0.45
GDPD3-203ENST00000565704 E9PSI1 815 aa17.88■□□□□ 0.45
GDPD3-203ENST00000565704 THUMPD2Q9BTF0 503 aaKnown RBP17.88■□□□□ 0.45
GDPD3-203ENST00000565704 SHANK3Q9BYB0 1731 aa17.87■□□□□ 0.45
GDPD3-203ENST00000565704 MCM10Q7L590 875 aa17.87■□□□□ 0.45
GDPD3-203ENST00000565704 IFNL2Q8IZJ0 200 aa17.87■□□□□ 0.45
GDPD3-203ENST00000565704 GJD4Q96KN9 370 aaPredicted RBP17.87■□□□□ 0.45
GDPD3-203ENST00000565704 LGR6Q9HBX8 967 aa17.87■□□□□ 0.45
GDPD3-203ENST00000565704 WNK3Q9BYP7 1800 aa17.86■□□□□ 0.45
GDPD3-203ENST00000565704 RNMTO43148 476 aaKnown RBP17.86■□□□□ 0.45
GDPD3-203ENST00000565704 TRPC5Q9UL62 973 aaPredicted RBP17.86■□□□□ 0.45
GDPD3-203ENST00000565704 CHL1O00533 1208 aa17.85■□□□□ 0.45
GDPD3-203ENST00000565704 LRRC37A3O60309 1634 aa17.85■□□□□ 0.45
GDPD3-203ENST00000565704 GLI3P10071 1580 aa17.85■□□□□ 0.45
GDPD3-203ENST00000565704 CALD1Q05682 793 aaKnown RBP17.85■□□□□ 0.45
GDPD3-203ENST00000565704 CFAP44Q96MT7 982 aa17.85■□□□□ 0.45
GDPD3-203ENST00000565704 IFT57Q9NWB7 429 aa17.85■□□□□ 0.45
GDPD3-203ENST00000565704 KDM6AO15550 1401 aaPredicted RBP17.84■□□□□ 0.45
GDPD3-203ENST00000565704 PCDH11XQ9BZA7 1347 aa17.84■□□□□ 0.45
GDPD3-203ENST00000565704 PCDH11YQ9BZA8 1340 aa17.84■□□□□ 0.45
GDPD3-203ENST00000565704 QTRT2Q9H974 415 aaKnown RBP17.84■□□□□ 0.45
GDPD3-203ENST00000565704 EXOC5O00471 708 aa17.83■□□□□ 0.44
GDPD3-203ENST00000565704 C1orf141Q5JVX7 400 aa17.83■□□□□ 0.44
GDPD3-203ENST00000565704 MPRIPQ6WCQ1 1025 aa17.83■□□□□ 0.44
GDPD3-203ENST00000565704 RTF1Q92541 710 aaKnown RBP17.83■□□□□ 0.44
GDPD3-203ENST00000565704 DCAF5Q96JK2 942 aa17.83■□□□□ 0.44
GDPD3-203ENST00000565704 BABAM1Q9NWV8 329 aa17.83■□□□□ 0.44
GDPD3-203ENST00000565704 RGS17Q9UGC6 210 aaPredicted RBP17.83■□□□□ 0.44
GDPD3-203ENST00000565704 CENPBP07199 599 aaPredicted RBP17.82■□□□□ 0.44
GDPD3-203ENST00000565704 HSP90AB1P08238 724 aaKnown RBP17.82■□□□□ 0.44
GDPD3-203ENST00000565704 THSD7AQ9UPZ6 1657 aa17.82■□□□□ 0.44
GDPD3-203ENST00000565704 TNS2Q63HR2 1409 aa17.81■□□□□ 0.44
GDPD3-203ENST00000565704 GNAI1P63096 354 aa17.81■□□□□ 0.44
GDPD3-203ENST00000565704 FAM98CQ17RN3 349 aaKnown RBP17.81■□□□□ 0.44
GDPD3-203ENST00000565704 TAF7Q15545 349 aaPredicted RBP17.8■□□□□ 0.44
GDPD3-203ENST00000565704 ZNF772Q68DY9 489 aaPredicted RBP17.8■□□□□ 0.44
GDPD3-203ENST00000565704 MYH16Q9H6N6 1097 aa17.8■□□□□ 0.44
GDPD3-203ENST00000565704 CCDC9Q9Y3X0 531 aaKnown RBP17.8■□□□□ 0.44
GDPD3-203ENST00000565704 MRC1P22897 1456 aa17.8■□□□□ 0.44
GDPD3-203ENST00000565704 SCN11AQ9UI33 1791 aa17.79■□□□□ 0.44
GDPD3-203ENST00000565704 FANCIQ9NVI1 1328 aa17.79■□□□□ 0.44
GDPD3-203ENST00000565704 DDB1Q16531 1140 aa17.79■□□□□ 0.44
GDPD3-203ENST00000565704 MARCH10Q8NA82 808 aaPredicted RBP17.79■□□□□ 0.44
GDPD3-203ENST00000565704 MBIPQ9NS73 344 aa17.79■□□□□ 0.44
GDPD3-203ENST00000565704 ERVV-2B6SEH9 535 aa17.78■□□□□ 0.44
GDPD3-203ENST00000565704 DDX54Q8TDD1 881 aaKnown RBP17.78■□□□□ 0.44
GDPD3-203ENST00000565704 SIPA1L3O60292 1781 aaPredicted RBP17.77■□□□□ 0.44
GDPD3-203ENST00000565704 TSR2Q969E8 191 aaKnown RBP17.77■□□□□ 0.44
GDPD3-203ENST00000565704 SLC52A2Q9HAB3 445 aa17.77■□□□□ 0.44
GDPD3-203ENST00000565704 MIS18AQ9NYP9 233 aa17.75■□□□□ 0.43
GDPD3-203ENST00000565704 VIRMAQ69YN4 1812 aaKnown RBP17.75■□□□□ 0.43
GDPD3-203ENST00000565704 BCL9O00512 1426 aa17.74■□□□□ 0.43
GDPD3-203ENST00000565704 RBM6P78332 1123 aaKnown RBP17.74■□□□□ 0.43
GDPD3-203ENST00000565704 NFATC2IPQ8NCF5 419 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms