RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 FAM182BQ5T319 152 aa13.64□□□□□ -0.23
CNOT1-208ENST00000565697 MAP3K19Q56UN5 1328 aa13.64□□□□□ -0.23
CNOT1-208ENST00000565697 EXOC5O00471 708 aa13.63□□□□□ -0.23
CNOT1-208ENST00000565697 HOXC9P31274 260 aa13.63□□□□□ -0.23
CNOT1-208ENST00000565697 ZNF579Q8NAF0 562 aaKnown RBP13.63□□□□□ -0.23
CNOT1-208ENST00000565697 RGPD1P0DJD0 1748 aa13.63□□□□□ -0.23
CNOT1-208ENST00000565697 KIF24Q5T7B8 1368 aa13.62□□□□□ -0.23
CNOT1-208ENST00000565697 PANK3Q9H999 370 aa13.62□□□□□ -0.23
CNOT1-208ENST00000565697 WNK3Q9BYP7 1800 aa13.62□□□□□ -0.23
CNOT1-208ENST00000565697 FAM208AQ9UK61 1670 aaKnown RBP13.61□□□□□ -0.23
CNOT1-208ENST00000565697 IL2RBP14784 551 aa13.61□□□□□ -0.23
CNOT1-208ENST00000565697 RRS1Q15050 365 aaKnown RBP13.61□□□□□ -0.23
CNOT1-208ENST00000565697 DEFB132Q7Z7B7 95 aa13.61□□□□□ -0.23
CNOT1-208ENST00000565697 LTV1Q96GA3 475 aaPredicted RBP13.61□□□□□ -0.23
CNOT1-208ENST00000565697 OVOS2A0A0G2JMS6 1433 aa13.61□□□□□ -0.23
CNOT1-208ENST00000565697 DISP2A7MBM2 1401 aa13.6□□□□□ -0.23
CNOT1-208ENST00000565697 TRIM37O94972 964 aa13.6□□□□□ -0.23
CNOT1-208ENST00000565697 FBLN1P23142 703 aa13.6□□□□□ -0.23
CNOT1-208ENST00000565697 SMG6Q86US8 1419 aaKnown RBP13.6□□□□□ -0.23
CNOT1-208ENST00000565697 LRRC37A3O60309 1634 aa13.6□□□□□ -0.23
CNOT1-208ENST00000565697 FLT4P35916 1363 aa13.59□□□□□ -0.23
CNOT1-208ENST00000565697 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
CNOT1-208ENST00000565697 NSD2O96028 1365 aa13.58□□□□□ -0.23
CNOT1-208ENST00000565697 KNSTRNQ9Y448 316 aa13.58□□□□□ -0.24
CNOT1-208ENST00000565697 KIF7Q2M1P5 1343 aa13.58□□□□□ -0.24
CNOT1-208ENST00000565697 INSRP06213 1382 aa13.58□□□□□ -0.24
CNOT1-208ENST00000565697 BCL9O00512 1426 aa13.57□□□□□ -0.24
CNOT1-208ENST00000565697 TNS2Q63HR2 1409 aa13.57□□□□□ -0.24
CNOT1-208ENST00000565697 APBA3O96018 575 aa13.57□□□□□ -0.24
CNOT1-208ENST00000565697 EN1Q05925 392 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-208ENST00000565697 PARD3Q8TEW0 1356 aa13.57□□□□□ -0.24
CNOT1-208ENST00000565697 EP400Q96L91 3159 aa13.57□□□□□ -0.24
CNOT1-208ENST00000565697 POTEMA6NI47 508 aa13.56□□□□□ -0.24
CNOT1-208ENST00000565697 MARCH10Q8NA82 808 aaPredicted RBP13.56□□□□□ -0.24
CNOT1-208ENST00000565697 TNS1Q9HBL0 1735 aaKnown RBP13.56□□□□□ -0.24
CNOT1-208ENST00000565697 HSP90AB2PQ58FF8 381 aa13.55□□□□□ -0.24
CNOT1-208ENST00000565697 PEAK1Q9H792 1746 aa13.55□□□□□ -0.24
CNOT1-208ENST00000565697 ANKRD26Q9UPS8 1709 aa13.55□□□□□ -0.24
CNOT1-208ENST00000565697 PPM1GO15355 546 aaPredicted RBP13.54□□□□□ -0.24
CNOT1-208ENST00000565697 BCL11BQ9C0K0 894 aaPredicted RBP13.54□□□□□ -0.24
CNOT1-208ENST00000565697 EMILIN1Q9Y6C2 1016 aa13.54□□□□□ -0.24
CNOT1-208ENST00000565697 WASHC2AQ641Q2 1341 aa13.54□□□□□ -0.24
CNOT1-208ENST00000565697 MAP2P11137 1827 aaKnown RBP13.53□□□□□ -0.24
CNOT1-208ENST00000565697 EZH2Q15910 746 aaKnown RBP13.53□□□□□ -0.24
CNOT1-208ENST00000565697 NBPF6Q5VWK0 638 aa13.53□□□□□ -0.24
CNOT1-208ENST00000565697 MORC1Q86VD1 984 aa13.53□□□□□ -0.24
CNOT1-208ENST00000565697 RAPGEF4Q8WZA2 1011 aa13.53□□□□□ -0.24
CNOT1-208ENST00000565697 NBPF4Q96M43 638 aa13.53□□□□□ -0.24
CNOT1-208ENST00000565697 CAMKK2Q96RR4 588 aa13.53□□□□□ -0.24
CNOT1-208ENST00000565697 PLSCR1O15162 318 aa13.52□□□□□ -0.25
CNOT1-208ENST00000565697 TNNT2P45379 298 aaPredicted RBP13.52□□□□□ -0.25
CNOT1-208ENST00000565697 POLKQ9UBT6 870 aa13.52□□□□□ -0.25
CNOT1-208ENST00000565697 SBF2Q86WG5 1849 aa13.52□□□□□ -0.25
CNOT1-208ENST00000565697 TATP17735 454 aaPredicted RBP13.51□□□□□ -0.25
CNOT1-208ENST00000565697 ZCRB1Q8TBF4 217 aaKnown RBP13.51□□□□□ -0.25
CNOT1-208ENST00000565697 RGPD2P0DJD1 1756 aa13.5□□□□□ -0.25
CNOT1-208ENST00000565697 GALR2O43603 387 aaPredicted RBP13.5□□□□□ -0.25
CNOT1-208ENST00000565697 NBPF14Q5TI25 921 aa13.5□□□□□ -0.25
CNOT1-208ENST00000565697 POTEGQ6S5H5 508 aa13.5□□□□□ -0.25
CNOT1-208ENST00000565697 USHBP1Q8N6Y0 703 aa13.49□□□□□ -0.25
CNOT1-208ENST00000565697 DDX54Q8TDD1 881 aaKnown RBP13.49□□□□□ -0.25
CNOT1-208ENST00000565697 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
CNOT1-208ENST00000565697 RGPD3A6NKT7 1758 aaPredicted RBP13.48□□□□□ -0.25
CNOT1-208ENST00000565697 RGPD4Q7Z3J3 1758 aa13.48□□□□□ -0.25
CNOT1-208ENST00000565697 POTEB2H3BUK9 544 aa13.47□□□□□ -0.25
CNOT1-208ENST00000565697 PER1O15534 1290 aaPredicted RBP13.47□□□□□ -0.25
CNOT1-208ENST00000565697 ACSBG1Q96GR2 724 aa13.47□□□□□ -0.25
CNOT1-208ENST00000565697 MEGF6O75095 1541 aa13.47□□□□□ -0.25
CNOT1-208ENST00000565697 PCDH11XQ9BZA7 1347 aa13.46□□□□□ -0.25
CNOT1-208ENST00000565697 PCDH11YQ9BZA8 1340 aa13.46□□□□□ -0.25
CNOT1-208ENST00000565697 EYA1Q99502 592 aa13.46□□□□□ -0.25
CNOT1-208ENST00000565697 NHSQ6T4R5 1651 aa13.46□□□□□ -0.26
CNOT1-208ENST00000565697 RREB1Q92766 1687 aa13.46□□□□□ -0.26
CNOT1-208ENST00000565697 KAT6BQ8WYB5 2073 aa13.46□□□□□ -0.26
CNOT1-208ENST00000565697 KCNQ2O43526 872 aa13.45□□□□□ -0.26
CNOT1-208ENST00000565697 EIF4A2Q14240 407 aaKnown RBP13.45□□□□□ -0.26
CNOT1-208ENST00000565697 SPG7Q9UQ90 795 aa13.45□□□□□ -0.26
CNOT1-208ENST00000565697 NCAPD2Q15021 1401 aa13.45□□□□□ -0.26
CNOT1-208ENST00000565697 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
CNOT1-208ENST00000565697 CC2D1BQ5T0F9 858 aaKnown RBP13.44□□□□□ -0.26
CNOT1-208ENST00000565697 PTF1AQ7RTS3 328 aa13.44□□□□□ -0.26
CNOT1-208ENST00000565697 PCDH10Q9P2E7 1040 aa13.44□□□□□ -0.26
CNOT1-208ENST00000565697 PLEKHG2Q9H7P9 1386 aa13.44□□□□□ -0.26
CNOT1-208ENST00000565697 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-208ENST00000565697 R3HDM1Q15032 1099 aaKnown RBP13.43□□□□□ -0.26
CNOT1-208ENST00000565697 NUP188Q5SRE5 1749 aa13.43□□□□□ -0.26
CNOT1-208ENST00000565697 SYTL4Q96C24 671 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-208ENST00000565697 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.43□□□□□ -0.267e-19■■■□□ 17.6
CNOT1-208ENST00000565697 TXNRD1Q16881 649 aa13.42□□□□□ -0.26
CNOT1-208ENST00000565697 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
CNOT1-208ENST00000565697 IGSF1Q8N6C5 1336 aa13.41□□□□□ -0.26
CNOT1-208ENST00000565697 PRIM1P49642 420 aaKnown RBP13.41□□□□□ -0.26
CNOT1-208ENST00000565697 HMGB2P26583 209 aaKnown RBP13.4□□□□□ -0.26
CNOT1-208ENST00000565697 MTHFSP49914 203 aa13.4□□□□□ -0.26
CNOT1-208ENST00000565697 CREBZFQ9NS37 354 aa13.4□□□□□ -0.26
CNOT1-208ENST00000565697 PKD1L3Q7Z443 1732 aa13.39□□□□□ -0.27
CNOT1-208ENST00000565697 BTAF1O14981 1849 aa13.39□□□□□ -0.27
CNOT1-208ENST00000565697 CYP27B1O15528 508 aa13.39□□□□□ -0.27
CNOT1-208ENST00000565697 AMOTQ4VCS5 1084 aa13.39□□□□□ -0.27
CNOT1-208ENST00000565697 IFNL2Q8IZJ0 200 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms