RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 SPG7Q9UQ90 795 aa8.81□□□□□ -1
TCF4-228ENST00000565393 RTL1A6NKG5 1358 aa8.81□□□□□ -1
TCF4-228ENST00000565393 YY1P25490 414 aa8.8□□□□□ -1
TCF4-228ENST00000565393 PTGER2P43116 358 aa8.8□□□□□ -1
TCF4-228ENST00000565393 ZNF827Q17R98 1081 aa8.8□□□□□ -1
TCF4-228ENST00000565393 MORC1Q86VD1 984 aa8.8□□□□□ -1
TCF4-228ENST00000565393 AKT1S1Q96B36 256 aa8.8□□□□□ -1
TCF4-228ENST00000565393 ARXQ96QS3 562 aa8.8□□□□□ -1
TCF4-228ENST00000565393 EYA1Q99502 592 aa8.8□□□□□ -1
TCF4-228ENST00000565393 FLT4P35916 1363 aa8.8□□□□□ -1
TCF4-228ENST00000565393 PEAK1Q9H792 1746 aa8.8□□□□□ -1
TCF4-228ENST00000565393 WASHC2AQ641Q2 1341 aa8.8□□□□□ -1
TCF4-228ENST00000565393 RGPD5Q99666 1765 aa8.79□□□□□ -1
TCF4-228ENST00000565393 KIF24Q5T7B8 1368 aa8.79□□□□□ -1
TCF4-228ENST00000565393 KLHL34Q8N239 644 aa8.79□□□□□ -1
TCF4-228ENST00000565393 SYT17Q9BSW7 474 aa8.79□□□□□ -1
TCF4-228ENST00000565393 FHDC1Q9C0D6 1143 aaPredicted RBP8.79□□□□□ -1
TCF4-228ENST00000565393 KNSTRNQ9Y448 316 aa8.79□□□□□ -1
TCF4-228ENST00000565393 LRP5O75197 1615 aa8.79□□□□□ -1
TCF4-228ENST00000565393 PCDH11XQ9BZA7 1347 aa8.79□□□□□ -1
TCF4-228ENST00000565393 PCDH11YQ9BZA8 1340 aa8.79□□□□□ -1
TCF4-228ENST00000565393 CYP27B1O15528 508 aa8.78□□□□□ -1
TCF4-228ENST00000565393 HMGB2P26583 209 aaKnown RBP8.78□□□□□ -1
TCF4-228ENST00000565393 POLD1P28340 1107 aa8.78□□□□□ -1
TCF4-228ENST00000565393 SLC16A10Q8TF71 515 aa8.78□□□□□ -1
TCF4-228ENST00000565393 EIF4A2Q14240 407 aaKnown RBP8.77□□□□□ -1.01
TCF4-228ENST00000565393 SMARCC1Q92922 1105 aaPredicted RBP8.77□□□□□ -1.01
TCF4-228ENST00000565393 MEGF6O75095 1541 aa8.76□□□□□ -1.01
TCF4-228ENST00000565393 CNGB1Q14028 1251 aaPredicted RBP8.76□□□□□ -1.01
TCF4-228ENST00000565393 COL23A1Q86Y22 540 aaPredicted RBP8.76□□□□□ -1.01
TCF4-228ENST00000565393 IFNL2Q8IZJ0 200 aa8.76□□□□□ -1.01
TCF4-228ENST00000565393 PELP1Q8IZL8 1130 aaKnown RBP8.76□□□□□ -1.01
TCF4-228ENST00000565393 PIGBQ92521 554 aa8.76□□□□□ -1.01
TCF4-228ENST00000565393 PNPLA7Q6ZV29 1317 aa8.76□□□□□ -1.01
TCF4-228ENST00000565393 EP400Q96L91 3159 aa8.75□□□□□ -1.01
TCF4-228ENST00000565393 RREB1Q92766 1687 aa8.75□□□□□ -1.01
TCF4-228ENST00000565393 NUP188Q5SRE5 1749 aa8.75□□□□□ -1.01
TCF4-228ENST00000565393 NKX1-1Q15270 411 aaPredicted RBP8.75□□□□□ -1.01
TCF4-228ENST00000565393 GPR162Q16538 588 aa8.75□□□□□ -1.01
TCF4-228ENST00000565393 PLEKHO1Q53GL0 409 aaPredicted RBP8.75□□□□□ -1.01
TCF4-228ENST00000565393 SGIP1Q9BQI5 828 aa8.75□□□□□ -1.01
TCF4-228ENST00000565393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.75□□□□□ -1.01
TCF4-228ENST00000565393 TMOD3Q9NYL9 352 aa8.75□□□□□ -1.01
TCF4-228ENST00000565393 LTN1O94822 1766 aa8.75□□□□□ -1.01
TCF4-228ENST00000565393 USP54Q70EL1 1684 aa8.75□□□□□ -1.01
TCF4-228ENST00000565393 PHKG2P15735 406 aa8.74□□□□□ -1.01
TCF4-228ENST00000565393 MSL1Q68DK7 614 aa8.74□□□□□ -1.01
TCF4-228ENST00000565393 FLAD1Q8NFF5 587 aa8.74□□□□□ -1.01
TCF4-228ENST00000565393 AK7Q96M32 723 aa8.74□□□□□ -1.01
TCF4-228ENST00000565393 NSD2O96028 1365 aa8.73□□□□□ -1.01
TCF4-228ENST00000565393 PALLDQ8WX93 1383 aa8.73□□□□□ -1.01
TCF4-228ENST00000565393 PHF14O94880 888 aa8.73□□□□□ -1.01
TCF4-228ENST00000565393 ATP6V1AP38606 617 aa8.73□□□□□ -1.01
TCF4-228ENST00000565393 CABP4P57796 275 aa8.73□□□□□ -1.01
TCF4-228ENST00000565393 AMOTQ4VCS5 1084 aa8.73□□□□□ -1.01
TCF4-228ENST00000565393 ASAP1Q9ULH1 1129 aa8.73□□□□□ -1.01
TCF4-228ENST00000565393 LOC102724428A0A0B4J2F2 783 aa8.72□□□□□ -1.01
TCF4-228ENST00000565393 HSP90AB1P08238 724 aaKnown RBP8.72□□□□□ -1.01
TCF4-228ENST00000565393 MTHFSP49914 203 aa8.72□□□□□ -1.01
TCF4-228ENST00000565393 SIK1P57059 783 aa8.72□□□□□ -1.01
TCF4-228ENST00000565393 C1orf141Q5JVX7 400 aa8.72□□□□□ -1.01
TCF4-228ENST00000565393 SULT6B1Q6IMI4 303 aa8.72□□□□□ -1.01
TCF4-228ENST00000565393 SMIM5Q71RC9 77 aa8.72□□□□□ -1.01
TCF4-228ENST00000565393 RBM42Q9BTD8 480 aaKnown RBP8.72□□□□□ -1.01
TCF4-228ENST00000565393 SBF2Q86WG5 1849 aa8.72□□□□□ -1.01
TCF4-228ENST00000565393 NHSQ6T4R5 1651 aa8.72□□□□□ -1.01
TCF4-228ENST00000565393 CC2D1BQ5T0F9 858 aaKnown RBP8.71□□□□□ -1.02
TCF4-228ENST00000565393 ZNF530Q6P9A1 599 aaPredicted RBP8.71□□□□□ -1.02
TCF4-228ENST00000565393 DCAF5Q96JK2 942 aa8.71□□□□□ -1.02
TCF4-228ENST00000565393 ATG3Q9NT62 314 aa8.71□□□□□ -1.02
TCF4-228ENST00000565393 WNK3Q9BYP7 1800 aa8.7□□□□□ -1.02
TCF4-228ENST00000565393 ERVV-2B6SEH9 535 aa8.7□□□□□ -1.02
TCF4-228ENST00000565393 KIF7Q2M1P5 1343 aa8.7□□□□□ -1.02
TCF4-228ENST00000565393 IGSF1Q8N6C5 1336 aa8.7□□□□□ -1.02
TCF4-228ENST00000565393 RGPD3A6NKT7 1758 aaPredicted RBP8.69□□□□□ -1.02
TCF4-228ENST00000565393 RGPD4Q7Z3J3 1758 aa8.69□□□□□ -1.02
TCF4-228ENST00000565393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.69□□□□□ -1.02
TCF4-228ENST00000565393 GNPATO15228 680 aa8.69□□□□□ -1.02
TCF4-228ENST00000565393 PTCD1O75127 700 aaKnown RBP8.69□□□□□ -1.02
TCF4-228ENST00000565393 IL13P35225 146 aa8.69□□□□□ -1.02
TCF4-228ENST00000565393 ITPK1Q13572 414 aa8.69□□□□□ -1.02
TCF4-228ENST00000565393 AMER1Q5JTC6 1135 aaPredicted RBP8.69□□□□□ -1.02
TCF4-228ENST00000565393 TRAPPC3LQ5T215 181 aa8.69□□□□□ -1.02
TCF4-228ENST00000565393 AEBP1Q8IUX7 1158 aa8.69□□□□□ -1.02
TCF4-228ENST00000565393 NFATC2IPQ8NCF5 419 aa8.69□□□□□ -1.02
TCF4-228ENST00000565393 LINC00116Q8NCU8 138 aa8.69□□□□□ -1.02
TCF4-228ENST00000565393 NLGN2Q8NFZ4 835 aa8.69□□□□□ -1.02
TCF4-228ENST00000565393 FAM208AQ9UK61 1670 aaKnown RBP8.69□□□□□ -1.02
TCF4-228ENST00000565393 PER1O15534 1290 aaPredicted RBP8.68□□□□□ -1.02
TCF4-228ENST00000565393 HMOX1P09601 288 aa8.68□□□□□ -1.02
TCF4-228ENST00000565393 RTCBQ9Y3I0 505 aaKnown RBP8.68□□□□□ -1.02
TCF4-228ENST00000565393 BTAF1O14981 1849 aa8.68□□□□□ -1.02
TCF4-228ENST00000565393 GRIN3BO60391 1043 aa8.67□□□□□ -1.02
TCF4-228ENST00000565393 DIAPH1O60610 1272 aaKnown RBP8.67□□□□□ -1.02
TCF4-228ENST00000565393 SSFA2P28290 1259 aa8.67□□□□□ -1.02
TCF4-228ENST00000565393 CD2APQ9Y5K6 639 aa8.67□□□□□ -1.02
TCF4-228ENST00000565393 CASZ1Q86V15 1759 aa8.66□□□□□ -1.02
TCF4-228ENST00000565393 U2SURPO15042 1029 aaKnown RBP8.66□□□□□ -1.02
TCF4-228ENST00000565393 RFC4P35249 363 aa8.66□□□□□ -1.02
TCF4-228ENST00000565393 AMIGO3Q86WK7 504 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms