RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 CTAGE5O15320 804 aa5.93□□□□□ -1.46
SMG1-211ENST00000565324 NBPF1Q3BBV0 1214 aa5.93□□□□□ -1.46
SMG1-211ENST00000565324 IRX3P78415 501 aaPredicted RBP5.93□□□□□ -1.46
SMG1-211ENST00000565324 CEP112Q8N8E3 955 aa5.93□□□□□ -1.46
SMG1-211ENST00000565324 ARFGAP3Q9NP61 516 aa5.93□□□□□ -1.46
SMG1-211ENST00000565324 PLVAPQ9BX97 442 aa5.93□□□□□ -1.46
SMG1-211ENST00000565324 CBX1P83916 185 aa5.93□□□□□ -1.46
SMG1-211ENST00000565324 IFI16Q16666 785 aaKnown RBP5.93□□□□□ -1.46
SMG1-211ENST00000565324 FOXD1Q16676 465 aa5.93□□□□□ -1.46
SMG1-211ENST00000565324 CFAP100Q494V2 611 aa5.93□□□□□ -1.46
SMG1-211ENST00000565324 CCDC113Q9H0I3 377 aa5.93□□□□□ -1.46
SMG1-211ENST00000565324 SWAP70Q9UH65 585 aa5.93□□□□□ -1.46
SMG1-211ENST00000565324 GSTTP1A0A1W2PQM5 241 aa5.93□□□□□ -1.46
SMG1-211ENST00000565324 ZWINTO95229 277 aa5.93□□□□□ -1.46
SMG1-211ENST00000565324 SCAND2PQ9GZW5 306 aaPredicted RBP5.93□□□□□ -1.46
SMG1-211ENST00000565324 FERP16591 822 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 CLIP2Q9UDT6 1046 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 ELL2O00472 640 aaPredicted RBP5.92□□□□□ -1.46
SMG1-211ENST00000565324 EIF2S2P20042 333 aaKnown RBP5.92□□□□□ -1.46
SMG1-211ENST00000565324 KRT222Q8N1A0 295 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 PHAXQ9H814 394 aaKnown RBP5.92□□□□□ -1.46
SMG1-211ENST00000565324 ZSCAN25Q6NSZ9 544 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 ST20-MTHFSA0A0A6YYL1 179 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 TSNARE1Q96NA8 513 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 BACH2Q9BYV9 841 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 CCDC69A6NI79 296 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 TUBB4AP04350 444 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 GNAI2P04899 355 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 MCM4P33991 863 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 CKAP4Q07065 602 aaKnown RBP5.92□□□□□ -1.46
SMG1-211ENST00000565324 TSG101Q99816 390 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 ZFYP08048 801 aaPredicted RBP5.92□□□□□ -1.46
SMG1-211ENST00000565324 EVA1CP58658 441 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 TOP1P11387 765 aaKnown RBP5.92□□□□□ -1.46
SMG1-211ENST00000565324 MLECQ14165 292 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 LARP1Q6PKG0 1096 aaKnown RBP5.92□□□□□ -1.46
SMG1-211ENST00000565324 WASHC2CQ9Y4E1 1318 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 TTC14Q96N46 770 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 PYM1Q9BRP8 204 aaKnown RBP5.92□□□□□ -1.46
SMG1-211ENST00000565324 GTPBP4Q9BZE4 634 aaKnown RBP5.92□□□□□ -1.46
SMG1-211ENST00000565324 CCDC6Q16204 474 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 CCDC150Q8NCX0 1101 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 CEP83Q9Y592 693 aa5.92□□□□□ -1.46
SMG1-211ENST00000565324 CCDC171Q6TFL3 1326 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 LTV1Q96GA3 475 aaPredicted RBP5.91□□□□□ -1.46
SMG1-211ENST00000565324 ZNF287Q9HBT7 754 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 NOL3O60936 208 aaKnown RBP5.91□□□□□ -1.46
SMG1-211ENST00000565324 CCDC155Q8N6L0 562 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 PANK1Q8TE04 598 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 NAP1L3Q99457 506 aaPredicted RBP5.91□□□□□ -1.46
SMG1-211ENST00000565324 CTNNA3Q9UI47 895 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 USH1CQ9Y6N9 552 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 ABCC8Q09428 1581 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 TUBBP07437 444 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 DNAJC21Q5F1R6 531 aaKnown RBP5.91□□□□□ -1.46
SMG1-211ENST00000565324 ZNF428Q96B54 188 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 CCDC196A0A1B0GTZ2 297 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 CCT4P50991 539 aaKnown RBP5.91□□□□□ -1.46
SMG1-211ENST00000565324 RSRC1Q96IZ7 334 aaKnown RBP5.91□□□□□ -1.46
SMG1-211ENST00000565324 TSPYL4Q9UJ04 414 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 TMCO5BA8MYB1 307 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 HSF2BPO75031 334 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 UBE4AQ14139 1066 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 GOPCQ9HD26 462 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 TNNT1P13805 278 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 TDO2P48775 406 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 DHX57Q6P158 1386 aaKnown RBP5.91□□□□□ -1.46
SMG1-211ENST00000565324 FSD2A1L4K1 749 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 AIMP1Q12904 312 aaKnown RBP5.91□□□□□ -1.46
SMG1-211ENST00000565324 KIF4BQ2VIQ3 1234 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 CCDC178Q5BJE1 867 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 MSL1Q68DK7 614 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 BLOC1S2Q6QNY1 142 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 DDX19AQ9NUU7 478 aaKnown RBP5.91□□□□□ -1.46
SMG1-211ENST00000565324 SOGA3Q5TF21 947 aa5.91□□□□□ -1.46
SMG1-211ENST00000565324 HLTFQ14527 1009 aaKnown RBP eCLIP5.9□□□□□ -1.462e-7■□□□□ 11.3
SMG1-211ENST00000565324 TACC1O75410 805 aa5.9□□□□□ -1.46
SMG1-211ENST00000565324 RBM28Q9NW13 759 aaKnown RBP5.9□□□□□ -1.46
SMG1-211ENST00000565324 SOGA1O94964 1423 aa5.9□□□□□ -1.46
SMG1-211ENST00000565324 CLGNO14967 610 aa5.9□□□□□ -1.46
SMG1-211ENST00000565324 RIC3Q7Z5B4 369 aa5.9□□□□□ -1.46
SMG1-211ENST00000565324 CCDC172P0C7W6 258 aa5.9□□□□□ -1.46
SMG1-211ENST00000565324 CEBPZQ03701 1054 aaKnown RBP5.9□□□□□ -1.46
SMG1-211ENST00000565324 KIF6Q6ZMV9 814 aa5.9□□□□□ -1.46
SMG1-211ENST00000565324 SRRTQ9BXP5 876 aaKnown RBP5.9□□□□□ -1.46
SMG1-211ENST00000565324 MKRN1Q9UHC7 482 aaKnown RBP5.9□□□□□ -1.46
SMG1-211ENST00000565324 IKBKGQ9Y6K9 419 aa5.9□□□□□ -1.46
SMG1-211ENST00000565324 SH3BGRP55822 239 aaPredicted RBP5.9□□□□□ -1.46
SMG1-211ENST00000565324 A6NNZ2 444 aa5.9□□□□□ -1.47
SMG1-211ENST00000565324 OPA1O60313 960 aa5.9□□□□□ -1.47
SMG1-211ENST00000565324 MAPK8IP2Q13387 824 aaPredicted RBP5.9□□□□□ -1.47
SMG1-211ENST00000565324 TUBB8Q3ZCM7 444 aa5.9□□□□□ -1.47
SMG1-211ENST00000565324 HMGB2P26583 209 aaKnown RBP5.9□□□□□ -1.47
SMG1-211ENST00000565324 DHX29Q7Z478 1369 aaKnown RBP5.9□□□□□ -1.47
SMG1-211ENST00000565324 URI1O94763 535 aaPredicted RBP5.9□□□□□ -1.47
SMG1-211ENST00000565324 KIF5BP33176 963 aa5.9□□□□□ -1.47
SMG1-211ENST00000565324 LMAN1P49257 510 aa5.9□□□□□ -1.47
SMG1-211ENST00000565324 TTC31Q49AM3 519 aaPredicted RBP5.9□□□□□ -1.47
SMG1-211ENST00000565324 CCDC158Q5M9N0 1113 aa5.9□□□□□ -1.47
SMG1-211ENST00000565324 CACNA2D4Q7Z3S7 1137 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms