RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 TMTC2Q8N394 836 aa7.49□□□□□ -1.21
PTPN9-204ENST00000564970 KLHL23Q8NBE8 558 aa7.49□□□□□ -1.21
PTPN9-204ENST00000564970 EXOC4Q96A65 974 aa7.49□□□□□ -1.21
PTPN9-204ENST00000564970 CHMP4CQ96CF2 233 aa7.49□□□□□ -1.21
PTPN9-204ENST00000564970 CALR3Q96L12 384 aaKnown RBP7.49□□□□□ -1.21
PTPN9-204ENST00000564970 C22orf23Q9BZE7 217 aa7.49□□□□□ -1.21
PTPN9-204ENST00000564970 ARGLU1Q9NWB6 273 aaPredicted RBP7.49□□□□□ -1.21
PTPN9-204ENST00000564970 ETAA1Q9NY74 926 aa7.49□□□□□ -1.21
PTPN9-204ENST00000564970 ELP1O95163 1332 aa7.49□□□□□ -1.21
PTPN9-204ENST00000564970 TARBP1Q13395 1621 aaKnown RBP7.49□□□□□ -1.21
PTPN9-204ENST00000564970 ANKRD36BQ8N2N9 1353 aa7.48□□□□□ -1.21
PTPN9-204ENST00000564970 BAG4O95429 457 aaKnown RBP7.48□□□□□ -1.21
PTPN9-204ENST00000564970 CCDC27Q2M243 656 aa7.48□□□□□ -1.21
PTPN9-204ENST00000564970 NLRP13Q86W25 1043 aa7.48□□□□□ -1.21
PTPN9-204ENST00000564970 ZNF513Q8N8E2 541 aaPredicted RBP7.48□□□□□ -1.21
PTPN9-204ENST00000564970 CCDC112Q8NEF3 446 aa7.48□□□□□ -1.21
PTPN9-204ENST00000564970 KIAA1524Q8TCG1 905 aa7.48□□□□□ -1.21
PTPN9-204ENST00000564970 TCP11Q8WWU5 503 aa7.48□□□□□ -1.21
PTPN9-204ENST00000564970 ERO1AQ96HE7 468 aa7.48□□□□□ -1.21
PTPN9-204ENST00000564970 DIP2BQ9P265 1576 aa7.48□□□□□ -1.21
PTPN9-204ENST00000564970 TRAK1Q9UPV9 953 aa7.48□□□□□ -1.21
PTPN9-204ENST00000564970 RRP15Q9Y3B9 282 aaKnown RBP7.48□□□□□ -1.21
PTPN9-204ENST00000564970 TIAM1Q13009 1591 aa7.47□□□□□ -1.21
PTPN9-204ENST00000564970 ERICH4A6NGS2 130 aa7.47□□□□□ -1.21
PTPN9-204ENST00000564970 IPO8O15397 1037 aaKnown RBP7.47□□□□□ -1.21
PTPN9-204ENST00000564970 PRPHP41219 470 aa7.47□□□□□ -1.21
PTPN9-204ENST00000564970 TMED1Q13445 227 aa7.47□□□□□ -1.21
PTPN9-204ENST00000564970 DHX8Q14562 1220 aaKnown RBP7.47□□□□□ -1.21
PTPN9-204ENST00000564970 CRYMQ14894 314 aa7.47□□□□□ -1.21
PTPN9-204ENST00000564970 RBBP5Q15291 538 aaKnown RBP7.47□□□□□ -1.21
PTPN9-204ENST00000564970 SYT10Q6XYQ8 523 aa7.47□□□□□ -1.21
PTPN9-204ENST00000564970 LEKR1Q6ZMV7 388 aa7.47□□□□□ -1.21
PTPN9-204ENST00000564970 CERKQ8TCT0 537 aa7.47□□□□□ -1.21
PTPN9-204ENST00000564970 ZNF526Q8TF50 670 aaPredicted RBP7.47□□□□□ -1.21
PTPN9-204ENST00000564970 DDX11Q96FC9 970 aa7.47□□□□□ -1.21
PTPN9-204ENST00000564970 RBSNQ9H1K0 784 aa7.47□□□□□ -1.21
PTPN9-204ENST00000564970 TSPY26PQ9H489 355 aa7.47□□□□□ -1.21
PTPN9-204ENST00000564970 ZBTB12Q9Y330 459 aaPredicted RBP7.47□□□□□ -1.21
PTPN9-204ENST00000564970 FYCO1Q9BQS8 1478 aa7.47□□□□□ -1.21
PTPN9-204ENST00000564970 KIF7Q2M1P5 1343 aa7.47□□□□□ -1.21
PTPN9-204ENST00000564970 TOP2AP11388 1531 aaKnown RBP7.47□□□□□ -1.21
PTPN9-204ENST00000564970 KDRP35968 1356 aa7.46□□□□□ -1.21
PTPN9-204ENST00000564970 REREQ9P2R6 1566 aa7.46□□□□□ -1.21
PTPN9-204ENST00000564970 RTEL1-TNFRSF6BF6WH68 1400 aa7.46□□□□□ -1.21
PTPN9-204ENST00000564970 PTPRGP23470 1445 aa7.46□□□□□ -1.21
PTPN9-204ENST00000564970 FMN1Q68DA7 1419 aa7.46□□□□□ -1.21
PTPN9-204ENST00000564970 PPFIA2O75334 1257 aa7.46□□□□□ -1.22
PTPN9-204ENST00000564970 RDXP35241 583 aaKnown RBP7.46□□□□□ -1.22
PTPN9-204ENST00000564970 EIF5P55010 431 aaKnown RBP7.46□□□□□ -1.22
PTPN9-204ENST00000564970 MYBPC2Q14324 1141 aa7.46□□□□□ -1.22
PTPN9-204ENST00000564970 PPP2R5AQ15172 486 aa7.46□□□□□ -1.22
PTPN9-204ENST00000564970 CCDC186Q7Z3E2 898 aa7.46□□□□□ -1.22
PTPN9-204ENST00000564970 C10orf67Q8IYJ2 551 aa7.46□□□□□ -1.22
PTPN9-204ENST00000564970 SDR16C5Q8N3Y7 309 aa7.46□□□□□ -1.22
PTPN9-204ENST00000564970 CCDC191Q8NCU4 936 aa7.46□□□□□ -1.22
PTPN9-204ENST00000564970 GIMAP7Q8NHV1 300 aa7.46□□□□□ -1.22
PTPN9-204ENST00000564970 DRC1Q96MC2 740 aa7.46□□□□□ -1.22
PTPN9-204ENST00000564970 SMC3Q9UQE7 1217 aa7.46□□□□□ -1.22
PTPN9-204ENST00000564970 HECW1Q76N89 1606 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.45□□□□□ -1.22
PTPN9-204ENST00000564970 ZBTB7CA1YPR0 619 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 NEMFO60524 1076 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 SRPK2P78362 688 aaKnown RBP7.45□□□□□ -1.22
PTPN9-204ENST00000564970 NEDD9Q14511 834 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 FILIP1LQ4L180 1135 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 KRBA2Q6ZNG9 492 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 EP400NLQ6ZTU2 488 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 ANKRD18AQ8IVF6 992 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 TEX11Q8IYF3 940 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 LSM14AQ8ND56 463 aaKnown RBP7.45□□□□□ -1.22
PTPN9-204ENST00000564970 DNAAF4Q8WXU2 420 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 UBA5Q9GZZ9 404 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 VEZTQ9HBM0 779 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 SPATS2LQ9NUQ6 558 aaKnown RBP7.45□□□□□ -1.22
PTPN9-204ENST00000564970 CEP126Q9P2H0 1117 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 LRRFIP2Q9Y608 721 aaKnown RBP7.45□□□□□ -1.22
PTPN9-204ENST00000564970 PTPRCP08575 1304 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 MROH2BQ7Z745 1585 aa7.45□□□□□ -1.22
PTPN9-204ENST00000564970 TOPBP1Q92547 1522 aa7.44□□□□□ -1.22
PTPN9-204ENST00000564970 A0A087WUV0 522 aaPredicted RBP7.44□□□□□ -1.22
PTPN9-204ENST00000564970 ZRANB2O95218 330 aaKnown RBP eCLIP7.44□□□□□ -1.22
PTPN9-204ENST00000564970 ACTN2P35609 894 aa7.44□□□□□ -1.22
PTPN9-204ENST00000564970 CORO7P57737 925 aa7.44□□□□□ -1.22
PTPN9-204ENST00000564970 CHRDL2Q6WN34 429 aa7.44□□□□□ -1.22
PTPN9-204ENST00000564970 STK26Q9P289 416 aa7.44□□□□□ -1.22
PTPN9-204ENST00000564970 CPSF2Q9P2I0 782 aaKnown RBP7.44□□□□□ -1.22
PTPN9-204ENST00000564970 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.44□□□□□ -1.22
PTPN9-204ENST00000564970 IL16Q14005 1332 aa7.44□□□□□ -1.22
PTPN9-204ENST00000564970 CCDC171Q6TFL3 1326 aa7.44□□□□□ -1.22
PTPN9-204ENST00000564970 LRRC9Q6ZRR7 1453 aa7.43□□□□□ -1.22
PTPN9-204ENST00000564970 EPRSP07814 1512 aaKnown RBP7.43□□□□□ -1.22
PTPN9-204ENST00000564970 A0A1B0GUA9 196 aa7.43□□□□□ -1.22
PTPN9-204ENST00000564970 HMGB1P1B2RPK0 211 aaPredicted RBP7.43□□□□□ -1.22
PTPN9-204ENST00000564970 K7ELQ4 463 aaPredicted RBP7.43□□□□□ -1.22
PTPN9-204ENST00000564970 PRIM1P49642 420 aaKnown RBP7.43□□□□□ -1.22
PTPN9-204ENST00000564970 SF3B2Q13435 895 aaKnown RBP7.43□□□□□ -1.22
PTPN9-204ENST00000564970 MCM6Q14566 821 aa7.43□□□□□ -1.22
PTPN9-204ENST00000564970 HDGFL1Q5TGJ6 251 aa7.43□□□□□ -1.22
PTPN9-204ENST00000564970 FILIP1Q7Z7B0 1213 aa7.43□□□□□ -1.22
PTPN9-204ENST00000564970 KIAA1328Q86T90 577 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms