RNA–Protein interactions for RNA: ENST00000564921.1

CTU2-206, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 2

Gene CTU2, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-206ENST00000564921 TATP17735 454 aaPredicted RBP21.55■■□□□ 1.04
CTU2-206ENST00000564921 NCAPD2Q15021 1401 aa21.55■■□□□ 1.04
CTU2-206ENST00000564921 CNGB1Q14028 1251 aaPredicted RBP21.54■■□□□ 1.04
CTU2-206ENST00000564921 SHANK3Q9BYB0 1731 aa21.52■■□□□ 1.04
CTU2-206ENST00000564921 PARD3Q8TEW0 1356 aa21.52■■□□□ 1.04
CTU2-206ENST00000564921 PLSCR1O15162 318 aa21.52■■□□□ 1.04
CTU2-206ENST00000564921 NPC1L1Q9UHC9 1359 aa21.5■■□□□ 1.03
CTU2-206ENST00000564921 PSDA5PKW4 1024 aaPredicted RBP21.5■■□□□ 1.03
CTU2-206ENST00000564921 PROM2Q8N271 834 aa21.5■■□□□ 1.03
CTU2-206ENST00000564921 NHSQ6T4R5 1651 aa21.48■■□□□ 1.03
CTU2-206ENST00000564921 CYP27B1O15528 508 aa21.48■■□□□ 1.03
CTU2-206ENST00000564921 MTHFSP49914 203 aa21.48■■□□□ 1.03
CTU2-206ENST00000564921 IGSF1Q8N6C5 1336 aa21.48■■□□□ 1.03
CTU2-206ENST00000564921 RREB1Q92766 1687 aa21.47■■□□□ 1.03
CTU2-206ENST00000564921 KAT6BQ8WYB5 2073 aa21.47■■□□□ 1.03
CTU2-206ENST00000564921 IL13P35225 146 aa21.46■■□□□ 1.03
CTU2-206ENST00000564921 PRIM1P49642 420 aaKnown RBP21.46■■□□□ 1.03
CTU2-206ENST00000564921 R3HDM1Q15032 1099 aaKnown RBP21.46■■□□□ 1.03
CTU2-206ENST00000564921 NUP188Q5SRE5 1749 aa21.46■■□□□ 1.03
CTU2-206ENST00000564921 PCDH11XQ9BZA7 1347 aa21.45■■□□□ 1.02
CTU2-206ENST00000564921 PCDH11YQ9BZA8 1340 aa21.45■■□□□ 1.02
CTU2-206ENST00000564921 SRCAPQ6ZRS2 3230 aa21.44■■□□□ 1.02
CTU2-206ENST00000564921 AEBP1Q8IUX7 1158 aa21.44■■□□□ 1.02
CTU2-206ENST00000564921 RGPD3A6NKT7 1758 aaPredicted RBP21.43■■□□□ 1.02
CTU2-206ENST00000564921 RGPD4Q7Z3J3 1758 aa21.43■■□□□ 1.02
CTU2-206ENST00000564921 TXNRD1Q16881 649 aa21.43■■□□□ 1.02
CTU2-206ENST00000564921 SYTL4Q96C24 671 aaPredicted RBP21.43■■□□□ 1.02
CTU2-206ENST00000564921 BTAF1O14981 1849 aa21.42■■□□□ 1.02
CTU2-206ENST00000564921 PKD1L3Q7Z443 1732 aa21.42■■□□□ 1.02
CTU2-206ENST00000564921 SPG7Q9UQ90 795 aa21.42■■□□□ 1.02
CTU2-206ENST00000564921 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.41■■□□□ 1.02
CTU2-206ENST00000564921 DOT1LQ8TEK3 1739 aa21.41■■□□□ 1.02
CTU2-206ENST00000564921 NBPF14Q5TI25 921 aa21.4■■□□□ 1.02
CTU2-206ENST00000564921 SULT6B1Q6IMI4 303 aa21.4■■□□□ 1.02
CTU2-206ENST00000564921 ANO8Q9HCE9 1232 aaPredicted RBP21.4■■□□□ 1.02
CTU2-206ENST00000564921 NKX1-1Q15270 411 aaPredicted RBP21.39■■□□□ 1.01
CTU2-206ENST00000564921 PHKG2P15735 406 aa21.37■■□□□ 1.01
CTU2-206ENST00000564921 DIAPH1O60610 1272 aaKnown RBP21.36■■□□□ 1.01
CTU2-206ENST00000564921 IFNL2Q8IZJ0 200 aa21.36■■□□□ 1.01
CTU2-206ENST00000564921 LRRC4BQ9NT99 713 aa21.36■■□□□ 1.01
CTU2-206ENST00000564921 KDRP35968 1356 aa21.36■■□□□ 1.01
CTU2-206ENST00000564921 COL3A1P02461 1466 aaPredicted RBP21.35■■□□□ 1.01
CTU2-206ENST00000564921 PPP2R1AP30153 589 aa21.35■■□□□ 1.01
CTU2-206ENST00000564921 PLEKHO1Q53GL0 409 aaPredicted RBP21.35■■□□□ 1.01
CTU2-206ENST00000564921 MPRIPQ6WCQ1 1025 aa21.34■■□□□ 1.01
CTU2-206ENST00000564921 TOGARAM1Q9Y4F4 1720 aa21.34■■□□□ 1.01
CTU2-206ENST00000564921 PLEKHG2Q9H7P9 1386 aa21.34■■□□□ 1.01
CTU2-206ENST00000564921 HMOX1P09601 288 aa21.33■■□□□ 1.01
CTU2-206ENST00000564921 KCNQ4P56696 695 aa21.33■■□□□ 1.01
CTU2-206ENST00000564921 ZEB1P37275 1124 aaPredicted RBP21.32■■□□□ 1
CTU2-206ENST00000564921 PIGBQ92521 554 aa21.32■■□□□ 1
CTU2-206ENST00000564921 DDX10Q13206 875 aaKnown RBP21.31■■□□□ 1
CTU2-206ENST00000564921 AMOTQ4VCS5 1084 aa21.31■■□□□ 1
CTU2-206ENST00000564921 ZNF530Q6P9A1 599 aaPredicted RBP21.31■■□□□ 1
CTU2-206ENST00000564921 SLC15A2Q16348 729 aa21.3■■□□□ 1
CTU2-206ENST00000564921 PDGFDQ9GZP0 370 aaPredicted RBP21.3■■□□□ 1
CTU2-206ENST00000564921 STK32BQ9NY57 414 aa21.3■■□□□ 1
CTU2-206ENST00000564921 SLC27A3Q5K4L6 730 aa21.29■■□□□ 1
CTU2-206ENST00000564921 ITGB4P16144 1822 aa21.29■■□□□ 1
CTU2-206ENST00000564921 U2SURPO15042 1029 aaKnown RBP21.28■■□□□ 1
CTU2-206ENST00000564921 ZNF827Q17R98 1081 aa21.28■■□□□ 1
CTU2-206ENST00000564921 PAPPAQ13219 1627 aa21.28■■□□□ 1
CTU2-206ENST00000564921 CCNL1Q9UK58 526 aaPredicted RBP21.27■■□□□ 1
CTU2-206ENST00000564921 LY75O60449 1722 aa21.26■□□□□ 0.99
CTU2-206ENST00000564921 AKT1S1Q96B36 256 aa21.26■□□□□ 0.99
CTU2-206ENST00000564921 DCAF5Q96JK2 942 aa21.26■□□□□ 0.99
CTU2-206ENST00000564921 KDM6AO15550 1401 aaPredicted RBP21.25■□□□□ 0.99
CTU2-206ENST00000564921 CFAP53Q96M91 514 aa21.25■□□□□ 0.99
CTU2-206ENST00000564921 TMOD3Q9NYL9 352 aa21.25■□□□□ 0.99
CTU2-206ENST00000564921 PALLDQ8WX93 1383 aa21.24■□□□□ 0.99
CTU2-206ENST00000564921 HSP90AB1P08238 724 aaKnown RBP21.24■□□□□ 0.99
CTU2-206ENST00000564921 MTHFSDQ2M296 383 aaKnown RBP21.24■□□□□ 0.99
CTU2-206ENST00000564921 C1orf141Q5JVX7 400 aa21.24■□□□□ 0.99
CTU2-206ENST00000564921 ASAP1Q9ULH1 1129 aa21.24■□□□□ 0.99
CTU2-206ENST00000564921 LRP5O75197 1615 aa21.23■□□□□ 0.99
CTU2-206ENST00000564921 ERVV-2B6SEH9 535 aa21.23■□□□□ 0.99
CTU2-206ENST00000564921 SMARCC1Q92922 1105 aaPredicted RBP21.22■□□□□ 0.99
CTU2-206ENST00000564921 ATG3Q9NT62 314 aa21.22■□□□□ 0.99
CTU2-206ENST00000564921 CASZ1Q86V15 1759 aa21.21■□□□□ 0.99
CTU2-206ENST00000564921 AKAP4Q5JQC9 854 aa21.21■□□□□ 0.99
CTU2-206ENST00000564921 LGR6Q9HBX8 967 aa21.2■□□□□ 0.98
CTU2-206ENST00000564921 ZBTB7AO95365 584 aa21.19■□□□□ 0.98
CTU2-206ENST00000564921 CABP4P57796 275 aa21.19■□□□□ 0.98
CTU2-206ENST00000564921 NFATC2IPQ8NCF5 419 aa21.18■□□□□ 0.98
CTU2-206ENST00000564921 PHACTR3Q96KR7 559 aa21.18■□□□□ 0.98
CTU2-206ENST00000564921 RSPH6AQ9H0K4 717 aa21.18■□□□□ 0.98
CTU2-206ENST00000564921 NUDCQ9Y266 331 aa21.18■□□□□ 0.98
CTU2-206ENST00000564921 U2AF1L5P0DN76 240 aaPredicted RBP21.17■□□□□ 0.98
CTU2-206ENST00000564921 U2AF1Q01081 240 aaKnown RBP eCLIP21.17■□□□□ 0.98
CTU2-206ENST00000564921 SPON1Q9HCB6 807 aa21.17■□□□□ 0.98
CTU2-206ENST00000564921 PNPLA7Q6ZV29 1317 aa21.17■□□□□ 0.98
CTU2-206ENST00000564921 LOC102724428A0A0B4J2F2 783 aa21.16■□□□□ 0.98
CTU2-206ENST00000564921 PRKAR2BP31323 418 aa21.16■□□□□ 0.98
CTU2-206ENST00000564921 SIK1P57059 783 aa21.16■□□□□ 0.98
CTU2-206ENST00000564921 RALBP1Q15311 655 aa21.16■□□□□ 0.98
CTU2-206ENST00000564921 TFCP2L1Q9NZI6 479 aa21.16■□□□□ 0.98
CTU2-206ENST00000564921 ATF5Q9Y2D1 282 aaPredicted RBP21.16■□□□□ 0.98
CTU2-206ENST00000564921 RNMTO43148 476 aaKnown RBP21.15■□□□□ 0.98
CTU2-206ENST00000564921 SLC4A9Q96Q91 983 aa21.15■□□□□ 0.98
CTU2-206ENST00000564921 ITPK1Q13572 414 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms